Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	CP009273	2,160,620	IS5 (+) +4 bp	intergenic (+110/+160)	yegQ → / ← ogrK	putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome)

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	2095230 =	NA (NA)	111 (1.100)	77/296	0.2	100%	noncoding (1195/1195 nt)	IS5	repeat region
	?	CP009273	2160620 =	0 (0.000)					intergenic (+110/+163)	yegQ/ogrK	putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome)
*	?	CP009273	= 2096424	NA (NA)	94 (0.930)	70/296	0.4	100%	noncoding (1/1195 nt)	IS5	repeat region
	?	CP009273	= 2160623	0 (0.000)					intergenic (+113/+160)	yegQ/ogrK	putative peptidase/positive regulator of P2 growth (insertion of P2 ogr gene into the chromosome)

TCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGT  >  CP009273/2095082‑2095373                                                                                                                                                      |                                                                                                                                                tcgatatCTTCACAGTACATAAAGTAACCTTGATCGAAGACATTTAGTAGCGCCAAATCCGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CATTCAACAACCGTATCAGAATAGATACTTTCTTTAGGACTTTTTGTTTTATTaag                                                                                                                                                 <  1:1164374/146‑1 (MQ=255)  cAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaagg                                                                                                                                                <  1:1183444/149‑1 (MQ=255)  cAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaagg                                                                                                                                                >  1:573720/1‑149 (MQ=255)    atatCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaaggaa                                                                                                                                              <  1:494665/149‑1 (MQ=255)     tatCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATAATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTaaggaag                                                                                                                                             >  1:997928/1‑149 (MQ=255)          tCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCg                                                                                                                                        >  1:1267363/1‑149 (MQ=255)          tCACAGTACATAAAGTAACCTTGATCGAAACCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGACGGTGCg                                                                                                                                        >  2:1001402/1‑149 (MQ=255)                   aTAAAGTGACCGTGAGCGAAGCCATTTACGCGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAA‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCgg                                                                                                                               <  1:660207/149‑1 (MQ=255)                   aTAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCgg                                                                                                                               <  2:1497269/149‑1 (MQ=255)                     aaaGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATACATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTAGTAAGGAATGTGCGAAAAAGCgggg                                                                                                                             >  2:673609/1‑149 (MQ=255)                             cTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAAttctt                                                                                                                     >  2:151944/1‑149 (MQ=255)                                  tCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCgg                                                                                                                >  1:931879/1‑149 (MQ=255)                                  tCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCgg                                                                                                                >  2:347921/1‑149 (MQ=255)                                      aGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGa                                                                                                            <  1:650497/149‑1 (MQ=255)                                          aTTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa                                                                                                        <  2:482074/149‑1 (MQ=255)                                          aTTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCa                                                                                                        >  2:659424/1‑149 (MQ=255)                                                acGCACAAACTCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatt                                                                                                  <  2:91907/149‑1 (MQ=255)                                                acGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGagtagtttatt                                                                                                  >  1:1567819/1‑139 (MQ=255)                                                  gCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGCCTCAGtcatttc                                                                                                >  2:1106768/1‑149 (MQ=255)                                                    acaAAATCTGAAAAAAGTACCAGCATAAATGATCCTGCGCAC‑AAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtaatttcat                                                                                              >  1:100170/1‑149 (MQ=255)                                                     caAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGtcatttcatt                                                                                             >  1:780267/1‑149 (MQ=255)                                                      aaaaTCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTGAGtcctttcgtct                                                                                            >  1:724111/1‑145 (MQ=255)                                                      aaaaTCTGAAAAACGTAACAGAATAAATGATGCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTcatttcattt                                                                                            >  1:150912/1‑149 (MQ=255)                                                         aTCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATttctt                                                                                         <  1:1529224/149‑1 (MQ=255)                                                          tCTGAAAAACGAACCAGCATAAATGATCCTGC‑CACACAGTCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGCAAGGTGCGAATAAGCGGGGGAATGCTTCTCGGCTGACTCTGTCATTTCATtcctta                                                                                        >  1:763152/1‑148 (MQ=255)                                                           cTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCa                                                                                       <  1:1294653/149‑1 (MQ=255)                                                             gAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATg                                                                                     >  1:174744/1‑149 (MQ=255)                                                             gAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTATTCATg                                                                                     >  1:989316/1‑149 (MQ=255)                                                                aaaCGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGttt                                                                                  >  1:980908/1‑149 (MQ=255)                                                                   cGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                                                                               <  1:926518/149‑1 (MQ=255)                                                                   cGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAg                                                                               >  1:1190551/1‑149 (MQ=255)                                                                          gCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTACGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt                                                                        >  2:817958/1‑149 (MQ=255)                                                                          gCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGAttt                                                                        <  1:549324/149‑1 (MQ=255)                                                                              taaTGAGCCTGCTCAC‑CAATAAATATCCGTATCAGAATAGATACGTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTtc                                                                    <  2:375795/148‑1 (MQ=21)                                                                                aTGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCAATTTTTtctc                                                                  >  2:277924/1‑149 (MQ=255)                                                                                  gATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTccc                                                                >  2:1308160/1‑149 (MQ=255)                                                                                  gATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATGTTTTCTccc                                                                >  2:958945/1‑149 (MQ=255)                                                                                   aTCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCg                                                               >  1:321714/1‑149 (MQ=255)                                                                                      cTGCGCAC‑CAATCAACTACCGTATCAGAATAGGTACTTGCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTaa                                                            <  1:729132/149‑1 (MQ=255)                                                                                       cgcccAC‑CAATCAACAACCGTATCAGAATAGATACCTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACGCAGTCATTTCATTTCTTCATGCTTGAGCCGATTTTTTCTCCCGTaaa                                                           <  2:922552/145‑1 (MQ=255)                                                                                           cAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGcc                                                       <  2:1520067/149‑1 (MQ=255)                                                                                               cAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAACGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTTAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTg                                                    >  1:1220005/1‑149 (MQ=255)                                                                                                aaTCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGa                                                   >  1:114892/1‑149 (MQ=255)                                                                                                  tCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAAt                                                 <  2:1267363/149‑1 (MQ=255)                                                                                                   caacaaCCGTATCAGAATAGATCCTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGCATAAGCGGGGTAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAACTTACTTGCATc                                                >  1:1506815/1‑149 (MQ=18)                                                                                                   caacaaCCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGGTTTTTTCTCCAGTAACTGCCTTGAATc                                                >  1:1506747/1‑149 (MQ=255)                                                                                                    aacaacCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTATATGCATTTAATCa                                               <  1:692090/149‑1 (MQ=255)                                                                                                    aacaacCGTATCAGAATAGATACGTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCa                                               >  2:886878/1‑149 (MQ=255)                                                                                                     atatccGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                              <  1:673609/145‑1 (MQ=255)                                                                                                     acaacCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGAGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAg                                              >  1:643704/1‑149 (MQ=255)                                                                                                         ccGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTa                                          >  2:1364519/1‑149 (MQ=255)                                                                                                           gTATCAGAATAGATCCTTTCTTTAGCAATTTTTCTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATCTCTTCATGTTTGAGCCGATTTTTCCTCCCGTAAATGCCTTGAATCAGCCTAtt                                        <  2:1002999/149‑1 (MQ=17)                                                                                                             aTCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTGTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCtctgta                                      >  1:1283576/1‑144 (MQ=255)                                                                                                                   aTAGATACTTGCTTTACGAATTTTTGTTTTATTAAGGAAGGTGCGAATAATCGGGGAAATTCTTCTCGGCTGACTCAGACATTTCATTTCTTCATGTTCGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGt                                <  1:855023/149‑1 (MQ=17)                                                                                                                         aCTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc                          <  2:967689/149‑1 (MQ=255)                                                                                                                         aCTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTttcttc                          <  1:1308160/149‑1 (MQ=255)                                                                                                                          ctttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGACCTTTTACTGCGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg                         <  2:1616505/149‑1 (MQ=17)                                                                                                                          ctttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGACATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg                         >  2:908898/1‑149 (MQ=255)                                                                                                                          ctttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCg                         <  2:573720/149‑1 (MQ=255)                                                                                                                           tttctttAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCgg                        >  2:238406/1‑148 (MQ=255)                                                                                                                                  aGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTaa                 <  2:931879/149‑1 (MQ=255)                                                                                                                                   ggAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg                <  2:150912/149‑1 (MQ=255)                                                                                                                                   ggAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAg                <  2:321714/149‑1 (MQ=255)                                                                                                                                   ctttttttttttttttTAAGGAAGGGACGACAAAGCGGGGTGATTCTTCTCGGCTGAGTGAGTCAGTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCTTTTAAg                >  1:1193487/5‑149 (MQ=11)                                                                                                                                    gAATTTTTTTTTTTTTTTTTAAGGTGCGAATAAGCAGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCTTCTTTCAGCCGATTTTTTTTTTTTTTTTTTCCTTTAATCAGCCTATTTAGACCGtttttttgactcttaagc               >  1:339023/1‑137 (MQ=2)                                                                                                                                     aaTTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGc              >  1:1186618/1‑149 (MQ=40)                                                                                                                                      caggaaaatggcttaAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCg             <  1:396926/137‑1 (MQ=2)                                                                                                                                      aTTGTTGTTTTATTAAGGAAGGGGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCCTGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCg             <  1:227579/149‑1 (MQ=255)                                                                                                                                        ttttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGATTCTTCGCCATTTAAGGCGtt           >  1:512204/1‑149 (MQ=38)                                                                                                                                         tttGTTTTATTAAGGAAGGTGCGAATAAGCGGGGGAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATAAGCCTATTTAGACCGGTTCTTCGCCATTTAAGGCGTTa          >  2:1271188/1‑149 (MQ=255)                                                                                                                                           tGTTTTATTAAGGGAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATc        <  2:210853/149‑1 (MQ=25)                                                                                                                                           tGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATc        <  2:174744/149‑1 (MQ=35)                                                                                                                                             ttttATTAAGGAAGGTGCGAATGAGCGGCGAAATTCTTCTCGGCTGACTCAGTCATTACATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCGTTGAAGCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATccc      <  1:1088090/149‑1 (MQ=11)                                                                                                                                              tttATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATcccc     >  1:414960/1‑149 (MQ=33)                                                                                                                                                gattaAGGAAGGTTCGGAGAAGCTGTGATATTCTTCTCGGCGGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATACCTTCAATCACGTGAATTAGAGCGTTTCTTCGCCATTTAAGGCGTTACCCCCAg   >  1:1575098/2‑149 (MQ=11)                                                                                                                                                 attaAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGt  >  2:1637486/1‑149 (MQ=31)                                                                                                                                                      |                                                                                                                                                TCAATATCTTCACAGTACATAAAGTAACCTTGATCGAAGCCATTTACACGCACAAAATCTGAAAAACGTACCAGCATAAATGATCCTGCGCAC‑CAATCAACAACCGTATCAGAATAGATACTTTCTTTAGGAATTTTTGTTTTATTAAGGAAGGTGCGAATAAGCGGGGAAATTCTTCTCGGCTGACTCAGTCATTTCATTTCTTCATGTTTGAGCCGATTTTTTCTCCCGTAAATGCCTTGAATCAGCCTATTTAGACCGTTTCTTCGCCATTTAAGGCGTTATCCCCAGT  >  CP009273/2095082‑2095373

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.