BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	360104 =	NA (NA)	218 (1.850)	135/292	0.0	NA	intergenic (‑38/+557)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor
*	?	CP009273	= 360286	NA (NA)	218 (1.850)	135/292	0.0	NA	intergenic (‑220/+375)	lacZ/lacI	pseudogene, truncated/DNA‑binding transcriptional repressor

Only 100 of 119 total aligned reads displayed.

CACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTT  >  CP009273/360139‑360434

cACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGATCGGTCACCGACACGCCTCAGCTACAGCGACTGGCGCGGACTTACTACGCCGCCGTCCGCTTTATTTGATGCCTGgggaatta                                                                                                                                                     >  2:549342/1‑148 (MQ=2)

  cccTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggg                                                                                                                                                   <  2:497051/149‑1 (MQ=37)

   cccccGGGCCGTTGCTGCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTGCACCGACACACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggga                                                                                                                                                  <  2:470470/146‑1 (MQ=255)

         ggCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTCTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAACACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaa                                                                                                                                                 <  1:1409046/144‑1 (MQ=255)

         gcccattGCTCCGCAACGTCCAACTCCGCTCCCTGCCGATCTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattgggaa                                                                                                                                                 <  1:1570155/139‑1 (MQ=11)

          gCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaatt                                                                                                                                           <  2:866449/149‑1 (MQ=255)

            cGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTTTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCt                                                                                                                                         >  2:968567/1‑149 (MQ=255)

            cGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaatta                                                                                                                                              >  1:1483771/1‑144 (MQ=40)

             gTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGaattaa                                                                                                                                             <  1:791435/144‑1 (MQ=255)

              ttGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTCTATTTGATGCCTGGGGAATTGGGcattaat                                                                                                                                            >  1:1468623/1‑144 (MQ=255)

              ttGCTCCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTg                                                                                                                                       <  2:224627/149‑1 (MQ=255)

                gcctCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGaa                                                                                                                                     <  2:1835898/146‑1 (MQ=255)

                gCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGaa                                                                                                                                     <  2:1190524/149‑1 (MQ=255)

                gCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACGCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTc                                                                                                                                          <  1:1434322/144‑1 (MQ=255)

                 cTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGAAACAACGAAGGGCCGAGTCTTTCGACAGCGCCTTTCGGGTTGTATGATTCGTGgggcattggttcctgtcagt                                                                                                                                         >  1:1419169/1‑133 (MQ=11)

                  ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCGGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCtt                                                                                                                                        <  1:153957/144‑1 (MQ=255)

                  ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCtt                                                                                                                                        >  1:414482/1‑144 (MQ=255)

                  ttCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCtt                                                                                                                                        >  1:549006/1‑144 (MQ=255)

                      cAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGgggaattggtaagtggcacttgaag                                                                                                                                    >  1:1688300/1‑131 (MQ=11)

                       aaCGTTCAAATCCGCTCCCGGCCGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGa                                                                                                                                   <  1:1682614/144‑1 (MQ=255)

                                 gccGCCCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTg                                                                                                                    <  2:142441/148‑1 (MQ=255)

                                     cTCCCGGCGGATTTTTCCTACCCAGGAGAGCGTTCACCGACAAACAACAGAGAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTAGTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGt                                                                                                                     <  1:524254/144‑1 (MQ=255)

                                      tCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGCTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGCACGGGCCTCgcg                                                                                                                    >  1:34183/1‑142 (MQ=255)

                                      tCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACg                                                                                                               >  2:407060/1‑149 (MQ=255)

                                             ggATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGATAGTGCCAGTGTTTCGACTGAGCCTTTCGTATTATTTGATGCCTGGGGACTTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGGTACGcc                                                                                                             >  1:1675087/1‑144 (MQ=18)

                                               aTTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTa                                                                                                           <  1:884495/144‑1 (MQ=255)

                                               aTTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAttttt                                                                                                      <  2:1817523/149‑1 (MQ=255)

                                                tttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGGATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTta                                                                                                     >  2:1064983/1‑149 (MQ=255)

                                                tttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTta                                                                                                     >  2:1065204/1‑149 (MQ=255)

                                                 ttGTCGTACTCAGGAGAGCGTTCACCGACAAAGAACACATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAACTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtat                                                                                                    <  2:637577/149‑1 (MQ=255)

                                                 ttGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTAtt                                                                                                         >  1:202730/1‑144 (MQ=255)

                                                  tGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                                                                                   <  2:1502455/149‑1 (MQ=255)

                                                  tGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTAATACGCCTAttt                                                                                                        <  1:580124/144‑1 (MQ=255)

                                                       tACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTtata                                                                                                   <  1:113522/144‑1 (MQ=255)

                                                       tACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTa                                                                                              <  2:1221790/149‑1 (MQ=255)

                                                        gcgcAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAg                                                                                                  <  1:541138/141‑1 (MQ=255)

                                                         cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAGGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAgg                                                                                                 <  1:525277/144‑1 (MQ=255)

                                                         cTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                                                                                            <  2:1225743/149‑1 (MQ=255)

                                                            aGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGCATTGACTATTGATGCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTc                                                                                         >  2:1443209/1‑149 (MQ=21)

                                                             ggAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTaa                                                                                             >  1:1642844/1‑144 (MQ=255)

                                                              gagaGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAt                                                                                            >  1:1259836/1‑144 (MQ=255)

                                                              gagaGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCAt                                                                                       <  2:592799/149‑1 (MQ=255)

                                                               agagCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATg                                                                                      <  2:671607/149‑1 (MQ=255)

                                                                  gCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGa                                                                                   <  2:73843/149‑1 (MQ=255)

                                                                   cGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGCAAAGTAGGTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGaa                                                                                  <  2:873370/149‑1 (MQ=25)

                                                                    gTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGacg                                                                                 >  2:644993/1‑147 (MQ=255)

                                                                     ttCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGACTCGTGATACGCCTCTTTTTATAGGTTAATGTCAGGGGAAGa                                                                                >  2:619287/1‑149 (MQ=255)

                                                                      tCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGAt                                                                               >  2:1926289/1‑149 (MQ=255)

                                                                        aCCGACAAACCACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTCATACGCCTATTTTTATAGGTTAATGTCATGGGaa                                                                                  <  1:914329/144‑1 (MQ=255)

                                                                          cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGa                                                                                <  1:139205/144‑1 (MQ=255)

                                                                          cGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAg                                                                           >  2:1255885/1‑149 (MQ=255)

                                                                           gACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTATCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCCCGTGCTACGGCTATTCTTATAGGTTAATGTCATGGGAAGAt                                                                               >  1:214065/1‑144 (MQ=25)

                                                                            acaaacaaCAGATAACTCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                         <  2:1738067/149‑1 (MQ=255)

                                                                            acaaacaaCAGATAAAACGAAAGGCCCAGTCCTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTGTCCATGGCGAACGGGAAGCTGCGTACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGcc                                                                         <  2:474206/149‑1 (MQ=18)

                                                                                acaacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc                                                                     >  2:725315/1‑149 (MQ=255)

                                                                                 caacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAGGATCCAGCCGACCa                                                                    >  2:1141380/1‑149 (MQ=255)

                                                                                  aacaGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAg                                                                   <  2:250854/149‑1 (MQ=255)

                                                                                   acaGATAAATCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa                                                                       <  1:434317/144‑1 (MQ=255)

                                                                                   acaGATAAAACGAAAGGCCCAGTCTTTCGACTGATCCTCTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGa                                                                       <  1:929670/144‑1 (MQ=255)

                                                                                    caGATAGAACGAAAGGCCCAGTCTTTCGACTGTGCCTTACGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAc                                                                      <  1:930812/144‑1 (MQ=255)

                                                                                     aGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc                                                                     >  1:90407/1‑144 (MQ=255)

                                                                                     aGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAcc                                                                     <  1:394927/144‑1 (MQ=255)

                                                                                       aTAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGCATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCATATTTTTATAAGTTAATGTCATGGGAAGATCAAGCCGACCAGGCttt                                                              >  2:294549/1‑149 (MQ=255)

                                                                                         aaaaCGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCCTGGGAAGATCCAGCCGACCAGGc                                                                 >  1:699570/1‑144 (MQ=255)

                                                                                          aaaCGAAAGGCCCCGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGAccgtgcg                                                                >  1:1268646/1‑139 (MQ=255)

                                                                                                aaGGCCCAGTCTTTCGACTGAGCCTTTCGTGGTATATGAGCCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCcg                                                     <  2:1528111/149‑1 (MQ=255)

                                                                                                   gCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGGATTAATTCTTGAAGGCGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTAGTGGGAAGATCCAGGCGACCAGGCTTTCCACGGCCGCGt                                                  >  2:105397/1‑149 (MQ=38)

                                                                                                     ccAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGc                                                >  2:62975/1‑149 (MQ=255)

                                                                                                     ccAGTCGTTCGACTGAGCCTTTCGTTCTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGc                                                <  2:317151/149‑1 (MQ=255)

                                                                                                       aGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCg                                              <  2:964634/149‑1 (MQ=255)

                                                                                                           tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGTCGACCAGGCTTTCCACGCCCTCGTGcc                                               >  1:1020305/1‑144 (MQ=255)

                                                                                                           tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGcc                                               >  1:580847/1‑144 (MQ=255)

                                                                                                           tttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTcc                                          >  2:572203/1‑149 (MQ=255)

                                                                                                            ttCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCg                                              >  1:1136040/1‑144 (MQ=255)

                                                                                                              cGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATg                                       <  2:221179/149‑1 (MQ=255)

                                                                                                              cGACTGAGCCTGTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGACCTCGTGATACGCCTATTTTTATAGGGTAATGTCATGGGAAGATCCAGCCGACCCGGCGTTCCACGCCCGCGTGCGGCt                                            >  1:506155/1‑144 (MQ=255)

                                                                                                                aCTGAGCCTGTCGGTTGCGTGGATGCCGGGGGAAGTGGGAATTAATCCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAAGGGCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTc                                     <  2:1247742/149‑1 (MQ=255)

                                                                                                                  tGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCAt                                        <  1:66596/144‑1 (MQ=255)

                                                                                                                   gAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGGCGtt                                  >  2:1543059/1‑149 (MQ=255)

                                                                                                                    aGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCGGGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGt                                      >  1:1096690/1‑144 (MQ=255)

                                                                                                                     gCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTc                                     <  1:1701349/144‑1 (MQ=255)

                                                                                                                      ccTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTGTTGAGGACGAAAGGGCCTCGTGATACGCCTATTTGTAGAGGTGAATGTCATGTGAAGGTCCAGCCGACCAGGCTTTCTACTCCCGCGTGCAGGTACATGTCg                                    >  1:199277/1‑144 (MQ=255)

                                                                                                                       cTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGACACAGCCTCGGTATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTcgcg                              <  2:1939033/149‑1 (MQ=255)

                                                                                                                         ttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGCTACGCCTATTTTTATAGGTTAATGTCATGAGAAGATACAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTc                                 >  1:1206085/1‑144 (MQ=255)

                                                                                                                         ttCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTc                                 <  1:909542/144‑1 (MQ=255)

                                                                                                                          tCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTGATGGGAAGATCCAGCCGACCAGGCTTTCCACGCACGCGTGCCGCGACATGTCGTTGGCGCgg                           >  2:932204/1‑149 (MQ=255)

                                                                                                                            gTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCCTGGGAAGATCCAGCCGACCAGGCTTTCCATGCCCGCGTGCCGCTCCATGTCGTTcgcg                              <  1:8828/144‑1 (MQ=255)

                                                                                                                             ttttATTTGATGCCTGGGGACTTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAGGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGGTcgcgc                             >  1:414765/1‑144 (MQ=255)

                                                                                                                               ttATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTCTAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCCCGCCCGCGAGCCGCTCCATGCCGGTCGCGCgg                           >  1:801215/1‑144 (MQ=255)

                                                                                                                                     gATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCg                     >  1:255183/1‑144 (MQ=255)

                                                                                                                                         ccTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTGATGTCATGGGAAGATCCAGCCGACCAGGCTGTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACgcgc            >  2:668711/1‑149 (MQ=255)

                                                                                                                                          cTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAc                >  1:417018/1‑144 (MQ=255)

                                                                                                                                           tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGGGGTTCTCGGGAAcg               >  1:1381296/1‑144 (MQ=255)

                                                                                                                                           tGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAAcg               >  1:661331/1‑144 (MQ=255)

                                                                                                                                            ggggAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGc         <  2:1258956/149‑1 (MQ=255)

                                                                                                                                             gggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGTTtccgagaaccgcg             <  1:661347/144‑12 (MQ=255)

                                                                                                                                              ggaattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACgcgc            <  1:1050272/144‑1 (MQ=255)

                                                                                                                                                aattgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTg          <  1:878334/144‑1 (MQ=255)

                                                                                                                                                 attgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGt    <  2:1014866/149‑1 (MQ=255)

                                                                                                                                                   tgggaattAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGttt  <  2:49050/149‑1 (MQ=255)

CACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGACTGAGCCTTTCGTTTTATTTGATGCCTGGGGAATTGGGAATTAATTCTTGAAGACGAAAGGGCCTCGTGATACGCCTATTTTTATAGGTTAATGTCATGGGAAGATCCAGCCGACCAGGCTTTCCACGCCCGCGTGCCGCTCCATGTCGTTCGCGCGGTTCTCGGAAACGCGCTGCCGCGTTT  >  CP009273/360139‑360434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 13 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.