New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 3721251	65 (1.880)	3 (0.090)	3/254	NT	4.6%	noncoding (619/1443 nt)	IS150	repeat region
	?	CP009273	= 3721265	63 (1.940)					noncoding (633/1443 nt)	IS150	repeat region

TTTCATAACGATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAAC  >  CP009273/3721103‑3721397                                                                                                                                                     |                                                                                                                                                     tttCATAACGATTTCCACATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCC                                                                                                                                                      <  2:500185‑M1/149‑1 (MQ=255)  ttCATAACGATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATccccc                                                                                                                                                     >  2:373040/1‑149 (MQ=255)          gATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCAc                                                                                                                                                   <  1:75220/143‑1 (MQ=255)           aTCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTca                                                                                                                                            <  2:224295/149‑1 (MQ=255)              tcCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTgaggc                                                                                                                                         >  2:117546/1‑149 (MQ=255)              tcCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTcaggc                                                                                                                                         >  2:398481/1‑149 (MQ=255)                 atatCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTGTCAGAATAAATTCATACTGAATATTAATTAATTACTGAGATATACAGATGTGAATTATCCCCCACCCGGTCAGGCAgg                                                                                                                                      >  2:466611‑M2/1‑147 (MQ=255)                  tatCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTcag                                                                                                                                           >  1:526228/1‑143 (MQ=255)                         cAGCGATACATTACGAGTAACCAACGAAAGACAAAAGTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATACATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCCGGGGGTAACg                                                                                                                              >  2:225799/1‑149 (MQ=255)                              aTACATGACGAGTAACCAACGAAAGACAAAACTTAAAAATGCCATTTACAAATGATTTTCAGAATCAGTTCCTACTGCAAATCATTTAATTACTGAGCTATTTGGAGGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAAc                                                                                                                               <  1:553408/143‑1 (MQ=255)                               tctattaCGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCtgcctgaccgggtgggggataatt                                                                                                                              <  1:64251‑M1/140‑25 (MQ=255)                               tACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGGATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACg                                                                                                                              >  1:337403/1‑143 (MQ=255)                               tACACTACGAGTAACTAACGAATGACAAAACTGAAAAATGCCATTAACAAATAATTTCCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACg                                                                                                                        <  2:546071/149‑1 (MQ=255)                                aCATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCGGGGGATAACTTTTACGc                                                                                                                       >  2:290722/1‑149 (MQ=255)                                 cATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACGAAATATTAATTAATTACTCAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGtt                                                                                                                            <  1:217900/143‑1 (MQ=255)                                   ttACGCGTAACCAACGAAAGACAAAACTGAAAAATGCCATGAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTa                                                                                                                          <  1:84547/143‑1 (MQ=255)                                   ttACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGCTCTTCAGACTAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTa                                                                                                                          >  1:493640/1‑143 (MQ=255)                                   ttACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCtgcctgaccgggtgggggataattcagatcggaa                                                                                                                    >  2:72298‑M1/1‑115 (MQ=255)                                        aGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATg                                                                                                               <  2:191415/149‑1 (MQ=255)                                        aGTAAACAACGAAAGACAAAACTGAAATATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCa                                                                                                                     <  1:537305/143‑1 (MQ=255)                                          tAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTAGGCCATTAATGGc                                                                                                             >  2:485980/1‑149 (MQ=255)                                           aaCCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATATCGTTTACGCCATTAATGGCa                                                                                                            >  2:452352/1‑149 (MQ=255)                                              cAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCGGGCAGGGGATAACGTTTAGGCCATTAATg                                                                                                               >  1:346893/1‑143 (MQ=255)                                              cAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATACCGTTTACGCCATTATTGGCAGaa                                                                                                         >  2:187391/1‑149 (MQ=255)                                              cAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGaa                                                                                                         <  2:156502/149‑1 (MQ=255)                                               aaCGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCGTTTAATGGCAGAAg                                                                                                        >  2:6878/1‑149 (MQ=255)                                               aaCGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATgg                                                                                                              <  1:211402/143‑1 (MQ=255)                                                aCGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTAAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGGAGGGGATAACGTTTACGCCATTAATGGc                                                                                                             >  1:180888/1‑143 (MQ=255)                                                     aGACAAAACTGAAAAAGTCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTACCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTg                                                                                                  <  2:44260/149‑1 (MQ=255)                                                       aCAAGACTGAAAAAGGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAGTTAATTACTGGGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATGACGTTTAGGGCATTAATGGCCGACGtt                                                                                                      >  1:52857/1‑143 (MQ=255)                                                       aCAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAGTTCATACTAAATATTAATTAATTACTGAGATGTATAGATGTGAATTATCCCCCACCCGGTCAGACAGGGGATAACGTTTACGCCATTAATGGCAGCAGtt                                                                                                      >  1:294318/1‑143 (MQ=255)                                                       aCAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATCCTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGCCAGGCAGGGGATAACGTTTACGCCATTACTGGCAGAAGtt                                                                                                      >  1:71119/1‑143 (MQ=255)                                                           aaCTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATCTATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTCATGGCAGAAGGTGCTGATagag                                                                                            >  2:471121/1‑149 (MQ=255)                                                           aaCTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATagag                                                                                            <  2:531859/149‑1 (MQ=255)                                                               gAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTACTCAAGCACTGAGATATATAGATGTGAATTATCCCCCACCCGGCCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGa                                                                                        <  2:304773/149‑1 (MQ=255)                                                                       ccATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACg                                                                                      >  1:528635/1‑143 (MQ=255)                                                                        cATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACggt                                                                               >  2:390287/1‑147 (MQ=255)                                                                          ttAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCACCACCAGGTCAGGCAGGGGATAACGTTTACGCGATTAATGGCAGAAGTTGCTGATAGATGAGACGGaa                                                                                   >  1:105741/1‑143 (MQ=255)                                                                            gacgaaTGATTGTCAGGAGAAATTCATACTAAATATTAATTACGTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAAGGTTTACGGCATTAATGGCTGAAGGTGCTGATATGGGCGACGGAACg                                                                                 <  1:345704/139‑1 (MQ=255)                                                                            aaCAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGCGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACg                                                                                 <  1:349752/143‑1 (MQ=255)                                                                                aaTGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCtcgtcg                                                                     >  2:70539/1‑149 (MQ=255)                                                                                aaTGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGCCAGGGAATAACGTTTACGCCAGTAATGAGAGAAGGTGCTAATAGGGGCgcagtagcgcttc                                                                             >  1:170998/1‑131 (MQ=255)                                                                                 aTGATTTTCAGTATGCATACAGACGAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCtgcctgaccgggtgagggataattcacatctatatatctcagtaattaattaatatttagtatgaatttattct                                                                            <  1:254442‑M1/143‑75 (MQ=255)                                                                                 aTGATTTTCAGAAGAAATTCATACTAAATCGTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑tct                                                                          <  1:248899/143‑1 (MQ=255)                                                                                         cAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTgg                                                                  <  1:508916/143‑1 (MQ=255)                                                                                          aGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCTCACCCGGTCAGGCAggggataattcacatctatatatctcagtaattaattaatatttcgtctgtatgcatactgaaaatcat                                                                   <  1:254442‑M2/143‑70 (MQ=255)                                                                                            aaTAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGc                                                         >  2:570860/1‑149 (MQ=255)                                                                                               aaaTTCATACTAAACATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTACTGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGc                                                      <  2:21988/149‑1 (MQ=255)                                                                                                     aTACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACg                                                >  2:68636/1‑149 (MQ=255)                                                                                                         tAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTgc                                            <  2:102160/149‑1 (MQ=255)                                                                                                          aaaTATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTgcg                                           <  2:274318/149‑1 (MQ=255)                                                                                                             tatTAATTAATTACTGAGATAGATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCAt                                        <  2:73303/149‑1 (MQ=255)                                                                                                               ttaattaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGACCGTT‑‑TCTCGTCCGGGCTGATAAGCGGCCTACcgccgc                                            >  1:505249/1‑143 (MQ=255)                                                                                                               ttaattaattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTgc                                            <  1:535008/143‑1 (MQ=255)                                                                                                                 aattaattaCTGAGATATATAGATGTGAATTATCCCCCTCCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTgcgc                                          <  1:500343/143‑1 (MQ=255)                                                                                                                  attaattaCTGAGATATATAGATGTAAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAGTGGCAGAAGTTGCTGATAGAGGCGACGGGACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGt                                   >  2:330611/1‑149 (MQ=255)                                                                                                                    taattaCTGAGATATAGAGAGGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAg                                 <  2:347736/149‑1 (MQ=255)                                                                                                                     aattaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGa                                <  2:196814/149‑1 (MQ=255)                                                                                                                      attaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAGCGCTGCTCATCta                                     <  1:5777/143‑2 (MQ=255)                                                                                                                       ttaCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATg                              >  2:374909/1‑149 (MQ=255)                                                                                                                         aCTGAGATATATAGATGTGAATTATCCCCCCCCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTa                                  <  1:241107/143‑1 (MQ=255)                                                                                                                         aCTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGACGTTAATGGCAGAAGTTGCTGCAAGCGGCATC‑‑ATGGTTAATGGTGTCGCTGCGGATAAGCGGCATAACGCTGCGCAGCTGGTa                                  >  1:402275/1‑143 (MQ=255)                                                                                                                          cTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGa                           <  2:38467/149‑1 (MQ=255)                                                                                                                             agaTATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGGCTg                        >  2:239226/1‑149 (MQ=255)                                                                                                                             agaTATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGACGAAGTTGCTGATAGAGGCGACGGAACAAT‑‑TCTCGTCGTGGCTGATAAGAGGGATAACGCTGCGCATCTGGTAGATg                              >  1:320252/1‑143 (MQ=255)                                                                                                                                  ttccgatctGAATTATCCCCCACCCGGTCAGGCAggggataattcacatctatatatctcagtaattaattaatatttagtatgaatttattctgaaaatcatttgttaatggcatttttcagttttgtctttcgttggttactcgtaa                     >  2:72298‑M2/5‑34 (MQ=255)                                                                                                                                       aTGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGAAAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCt                    >  1:296318/1‑143 (MQ=255)                                                                                                                                        tgtgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTa             <  2:28111/149‑1 (MQ=255)                                                                                                                                        ggtgAATTAGCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTa             <  2:283921/148‑1 (MQ=255)                                                                                                                                          tgAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGAATGTTCTAAc                 >  1:524134/1‑143 (MQ=255)                                                                                                                                           gAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGACATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACg                >  1:80033/1‑143 (MQ=255)                                                                                                                                            aaTTATCCCCCACCCGGTCAGGCAggggataattcacatctatatatctcagtaattaattaatatttagtatgaatttattctgaaaatcatttgttaatggcatttttcagttttgtctttcgttggttactcgtaataga                 <  1:64251‑M2/143‑120 (MQ=255)                                                                                                                                            aaTTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAGGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTGGTCGTGGCTGATAAGCGGCATAACGCTCGGCATCTGGTGGATGGGCTTGTTTTAAggg               >  1:27240/1‑143 (MQ=255)                                                                                                                                              ttATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTa             >  1:113702/1‑143 (MQ=255)                                                                                                                                              ttATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCg       <  2:450242/149‑1 (MQ=255)                                                                                                                                                   ccccACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAGCGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCGGCGCATCTGGTAGATGCGACTGTTCCAACGGTAGTTCCGGcaac  >  2:535915/1‑149 (MQ=255)                                                                                                                                                   ccccACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGGT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGcaac  >  2:66039/1‑149 (MQ=255)                                                                                                                                                    cctgcctgaccgggtgggggataattcacatctgtatatctcagtaattaattaatattcagtatgaatttattctgacaatcatttgttaatggcatttttcagttttgtctttcgttggttactcgtaatgtatcgctggtagatat   >  2:466611‑M1/1‑2 (MQ=255)                                                                                                                                                     ccACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCgg      <  1:354000/143‑1 (MQ=255)                                                                                                                                                     ccACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCgg      <  1:330670/143‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     TTTCATAACGATCTCCATATCTACCAGCGATACATTACGAGTAACCAACGAAAGACAAAACTGAAAAATGCCATTAACAAATGATTTTCAGAATAAATTCATACTAAATATTAATTAATTACTGAGATATATAGATGTGAATTATCCCCCACCCGGTCAGGCAGGGGATAACGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTT‑‑TCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAAC  >  CP009273/3721103‑3721397

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.