New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 4604387	100 (1.630)	3 (0.050)	3/282	9.5	3.2%	noncoding (314/388 nt)	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences
	?	CP009273	= 4604403	88 (1.500)					noncoding (330/388 nt)	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP352 (repetitive extragenic palindromic) element; contains 8 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTA  >  CP009273/4604257‑4604546                                                                                                                                                   |                                                                                                                                                tACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCAt                                                                                                                                               >  2:436958/1‑149 (MQ=255) tACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGAGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCAt                                                                                                                                               >  1:666673/1‑149 (MQ=255)  aCAAGTCTGTGCCGAACCGTAGGCCGGCTCAGGCGGTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATc                                                                                                                                              >  1:492655/1‑149 (MQ=255)   cAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCATTCCCGCCGCAGcc                                                                                                                                             >  2:683176/1‑149 (MQ=255)    aaGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCg                                                                                                                                            >  2:434722/1‑149 (MQ=255)     aggcggtgCCGAGCCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTGGGCGCATAATGCCTGATGCGACGCTTGTCGGGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCgg                                                                                                                                           <  2:260956/144‑1 (MQ=255)        cTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAg                                                                                                                                        >  2:140616/1‑149 (MQ=255)        cTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAg                                                                                                                                        >  2:982023/1‑149 (MQ=255)         tgtgCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGGGCCGCATCCGGCAGt                                                                                                                                       >  1:856962/1‑149 (MQ=255)         tgtgCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGt                                                                                                                                       >  1:449354/1‑149 (MQ=255)          gtgCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGGTGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGtt                                                                                                                                      >  1:650568/1‑149 (MQ=255)          gtgCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGGTAAGGCGTTCGCGCCGCATCCGGCCGtt                                                                                                                                      >  1:857371/1‑149 (MQ=255)             ccgtaccgtaGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGgc                                                                                                                                   <  2:386626/149‑1 (MQ=255)             ccGAACCGTAGGCCGGATAAGGCGTTCATGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGCCGCTTGTCGCGCCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCCGCCGGCAGTTGgc                                                                                                                                   >  2:922805/1‑149 (MQ=14)                  ccGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGcaca                                                                                                                              >  1:580521/1‑149 (MQ=255)                    ctcggCCGGCTAAGGCGTTCACGCCGCATCTGGCATACGGCGCATAATGCCTGATTCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAAt                                                                                                                            <  2:906819/146‑1 (MQ=14)                     tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATg                                                                                                                           <  2:754517/149‑1 (MQ=255)                       ggCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGcc                                                                                                                         >  2:17444/1‑149 (MQ=255)                        gCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCt                                                                                                                        >  2:414325/1‑149 (MQ=255)                          cGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGa                                                                                                                      <  1:228611/149‑1 (MQ=255)                          cGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGACGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGCGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGa                                                                                                                      <  1:983485/149‑1 (MQ=255)                           ggATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATACTGCCTGATGCGACGCTTGTCGCGTCTTATCCTGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGAt                                                                                                                     <  2:959343/149‑1 (MQ=255)                            gATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGAGTGTGCCGAACCGTAGGCCGGATAAGGCGTCCGCCCCGCATCCGGACGGTGGCGCACAAGGCCTGagg                                                                                                                    >  2:475904/1‑147 (MQ=14)                            gATAAGGCGTTCACGCCGCATCCGGCAGTCGAAACATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATg                                                                                                                    >  2:962982/1‑149 (MQ=255)                               aaGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAGGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGa                                                                                                                 >  2:388749/1‑149 (MQ=255)                                aGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGGCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCgcc                                                                                                                >  1:342659/1‑147 (MQ=255)                                 ggCGTCCACGCCGCAACGGGCAGTCGTCGCATAATGCCTGCTGCGACGCTTGGCGCGTTTTATCATGCCTACAGGTGTGTGCCGAGCCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGctctactttacg                                                                                                               <  2:263501/149‑12 (MQ=14)                                  gCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGc                                                                                                              >  1:783306/1‑149 (MQ=255)                                    gctcccgccgcATCCGGCAGTTGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGGCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCtt                                                                                                            <  2:23038/144‑1 (MQ=255)                                      tCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATgggcggctgga                                                                                                          >  1:566176/1‑139 (MQ=255)                                        aCGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACCATGCCTGATGCGACGCTTGAcg                                                                                                        >  1:4533/1‑149 (MQ=255)                                         cgccgcATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCCCAAGGCCTGATGCGACGCTTGAcgc                                                                                                       >  2:72510/1‑149 (MQ=255)                                         cgccgcATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcgc                                                                                                       <  2:995479/149‑1 (MQ=255)                                          gccgcATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGCACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcgcg                                                                                                      >  1:884150/1‑149 (MQ=255)                                          gccgcATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGAcgcg                                                                                                      >  2:445020/1‑149 (MQ=255)                                           ccgcATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGt                                                                                                     >  2:955727/1‑149 (MQ=255)                                                 ccGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATc                                                                                               >  1:678991/1‑149 (MQ=255)                                                   ggCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAg                                                                                             <  1:140616/149‑1 (MQ=255)                                                   ggCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAg                                                                                             <  1:982023/149‑1 (MQ=255)                                                    gCAGTCGGCGCATCATGCCTGACGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTCACGCGTCTTATCAgg                                                                                            <  2:559822/149‑1 (MQ=255)                                                    gCAGCCGGCGGATAATGCCTGACGCCACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAgg                                                                                            <  1:591589/149‑1 (MQ=255)                                                         cGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc                                                                                       <  1:587433/149‑1 (MQ=255)                                                         cGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTAc                                                                                       <  1:89962/149‑1 (MQ=255)                                                           gcgcATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCCGGCCTACaa                                                                                     >  2:595927/1‑149 (MQ=255)                                                             gcATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGt                                                                                   <  2:680288/149‑1 (MQ=255)                                                               aTAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGAATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACGATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCt                                                                                 >  1:114338/1‑149 (MQ=255)                                                                tAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCtg                                                                                <  1:17444/149‑1 (MQ=255)                                                                      cTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTCTCCGGCCTACAAGTCTGTGCCGa                                                                          >  2:991562/1‑149 (MQ=255)                                                                         aTGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAAcc                                                                       <  2:678991/149‑1 (MQ=255)                                                                          taagacgcgacaagcgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCg                                                                      >  2:924184/14‑149 (MQ=255)                                                                            cGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTa                                                                    >  1:425062/1‑149 (MQ=255)                                                                             gACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATACGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAg                                                                   >  2:648786/1‑149 (MQ=255)                                                                              aCGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGCCGCTTGACGCGTCTCATCAGGCCTCCAAGGCTGTGCCGAACCGTaag                                                                  >  2:54164/1‑147 (MQ=255)                                                                               cGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGc                                                                 <  2:834615/149‑1 (MQ=255)                                                                                gCTTGCCGCGGCTTAGCATGCCTACAGGTTGGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGcc                                                                <  2:82722/149‑1 (MQ=255)                                                                                    gTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCAGCCTCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTATTCTCAGGCCTACAAGTCTGTGCCGAGCCGTAGGCCGTac                                                            >  2:261892/1‑148 (MQ=14)                                                                                       gggTCTTATCATGCCTACAGGTTTGTGCCGAGCCGTAGGCCGGATAAGGCGTCCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCg                                                         <  1:825572/147‑1 (MQ=255)                                                                                        cgTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCgg                                                        <  1:955727/149‑1 (MQ=255)                                                                                          tttgagcctGCCTACAGGGGTGTGCGGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATCCGGCa                                                      <  2:272612/141‑1 (MQ=14)                                                                                          tCTTTTCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCa                                                      <  2:888193/149‑1 (MQ=255)                                                                                          tCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGTGAAGGCGTTCGCGCCGCCTCCGGCAGTTGGCGCACAATGCCTGATGCGCCGCTGCACGCGTCTTATCAGGCCTACAAGTCTGTGCCTAACCGTAGGCCGTATCCGGcc                                                      >  2:567472/1‑148 (MQ=14)                                                                                            ttATCATGCCTACCGGTTTGTGCCGCACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGAAGTTGGCGCACAATGCCTGAAGCGAAGCTTGACGCGTCTTGACAGGACGACAAATCTGTGCCGAACCGACGGCCGTGTCCgggagg                                                    >  2:33582/1‑145 (MQ=11)                                                                                                cATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTcac                                                <  1:436958/149‑1 (MQ=255)                                                                                                    ccTACAGGTTTGGGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAAt                                            <  1:311137/149‑1 (MQ=255)                                                                                                     cTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGCTGCGACGCTTGACGCGTCCTATCAGGCCTACAAGTCTGTGCCGAGCCGTAGGCCCTATCCGGCATGTCACCAATa                                           >  2:126766/1‑149 (MQ=17)                                                                                                     cTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTGATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCTCAAATa                                           >  1:82878/1‑149 (MQ=255)                                                                                                      tACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTc                                                                                                    <  2:822782/91‑1 (MQ=39)                                                                                                       aCAGGCTTGGGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTGGGCGCACAATGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATaga                                         <  1:475904/149‑1 (MQ=255)                                                                                                           gTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCa                                                                                              <  1:395721/92‑1 (MQ=39)                                                                                                           gTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAgcgc                                     >  1:818128/1‑149 (MQ=255)                                                                                                             ttGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCg                                   <  1:987259/149‑1 (MQ=255)                                                                                                                tgCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGaa                                >  2:113282/1‑149 (MQ=255)                                                                                                                  ccGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACACATAGAGCGCCGGACat                              >  2:245108/1‑149 (MQ=255)                                                                                                                  ccGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAat                              >  2:961491/1‑149 (MQ=255)                                                                                                                   cGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAata                             <  1:106674/149‑1 (MQ=255)                                                                                                                     aaCCGTAGGCCGGATACGGCGGTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATc                           <  2:21752/149‑1 (MQ=255)                                                                                                                       ccGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCaa                         <  2:492655/149‑1 (MQ=255)                                                                                                                          tAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCg                      >  2:390420/1‑149 (MQ=255)                                                                                                                           aGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCgg                     <  2:783306/149‑1 (MQ=255)                                                                                                                            ggCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGc                    >  2:890622/1‑149 (MQ=255)                                                                                                                            ggCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGc                    >  2:905579/1‑149 (MQ=255)                                                                                                                             gCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGa                                                                                                                      <  1:295496/50‑1 (MQ=38)                                                                                                                             gCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCt                   <  1:445020/149‑1 (MQ=255)                                                                                                                             gCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATACAGCGCCGGAAATATCAACCGGcc                   >  2:994435/1‑148 (MQ=255)                                                                                                                              ccGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTc                  >  1:590198/1‑149 (MQ=255)                                                                                                                                 gATATGGCCTTCGCGTGGCAGCCGGAAGTTGGCGCACAAGGCCTGATGCGACGCTGGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGGATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCAcc               <  2:593580/149‑1 (MQ=21)                                                                                                                                   tagggCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCAcccc             <  2:399053/146‑1 (MQ=255)                                                                                                                                   tAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTcccccc             >  1:79547/1‑149 (MQ=255)                                                                                                                                   tAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCAcccc             >  1:963905/1‑149 (MQ=255)                                                                                                                                      cgggTTTGCTCCGCTTCCGGCAGTTGGCGCACAAGGCCTGATGCGACGCTTGACGCGTCGTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGAGCCGGAAATATCAACCGGCTCACCCcgcg          >  2:738788/4‑149 (MQ=25)                                                                                                                                         gTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAACATCAACCGGCCCACCCCGCGCAc       >  1:28291/1‑149 (MQ=255)                                                                                                                                            cgcgCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCtt    <  2:856962/149‑1 (MQ=255)                                                                                                                                             gcgcCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCAACCCGCGCACCttt   >  1:873247/1‑149 (MQ=255)                                                                                                                                              cgccgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTa  <  1:924184/149‑1 (MQ=255)                                                                                                                                                 cgcATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGc                                                                                           <  2:93268/57‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                TACAAGTCTGTGCCGAACCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGGCGCATAATGCCTGATGCGACGCTTGTCGCGTCTTATCATGCCTACAGGTTTGTGCCGAACCGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAGTTGGCGCACAATGCCTGATGCGACGCTTGACGCGTCTTATCAGGCCTACAAGTCTGTGCCGAACCGTAGGCCGTATCCGGCATGTCACAAATAGAGCGCCGGAAATATCAACCGGCTCACCCCGCGCACCTTTA  >  CP009273/4604257‑4604546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.