New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	1942820 =	55 (0.900)	3 (0.050)	3/278	9.4	5.5%	coding (70/453 nt)	nudB	dihydroneopterin triphosphate pyrophosphatase
	?	CP009273	1942866 =	52 (0.900)					coding (24/453 nt)	nudB	dihydroneopterin triphosphate pyrophosphatase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATTTCGTGTATTTGAGTCATATCA  >  CP009273/1942720‑1943009                                                                                                                                                   |                                                                                                                                                ccgtCGGGCATGGCGGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACg                                                                                                                                               <  1:111722/146‑1 (MQ=255) aCTTCGCGCATGGCAGCTTGCGGCGCGGTTTCCCCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCATATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACg                                                                                                                                               <  1:360504/149‑1 (MQ=255)  cTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGAGCGTCAGGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGc                                                                                                                                              >  2:103147/1‑149 (MQ=255)  cTTCGCGCATGGCAGCTTGCGGCGCGGGTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGc                                                                                                                                              >  2:838093/1‑149 (MQ=255)   ttCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCt                                                                                                                                             <  2:191615/149‑1 (MQ=255)      gcgcATGGCATCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTtat                                                                                                                                          >  2:590947/1‑149 (MQ=255)       cgcATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTtata                                                                                                                                         <  1:279242/149‑1 (MQ=255)          aTGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATacac                                                                                                                                      <  2:289933/149‑1 (MQ=255)          aTGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATacac                                                                                                                                      <  1:402018/149‑1 (MQ=255)           tGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATCCACt                                                                                                                                     >  1:607141/1‑149 (MQ=255)                      ttcactttttCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCAc                                                                                                                          >  2:869087/8‑149 (MQ=255)                         gcgGTTTCACCCTCTTCCACGCTGCCGGCTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGTGACGCTTATACACTTTATCCTTCACGCt                                                                                                                       <  1:537343/149‑1 (MQ=255)                                 ccccTCTTCCACGCTGCCGGTTACCGACTGACAGCAATCGGGATCGCCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAACCGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTc                                                                                                               <  2:798901/148‑1 (MQ=255)                                 aCCCTCTTCCACGCTGCCGATTACCGACTGCCAGAAATAGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGTGTTCCACGAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTc                                                                                                               >  1:729267/1‑149 (MQ=255)                                   ccTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGt                                                                                                             <  2:643120/149‑1 (MQ=255)                                      ctTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGa                                                                                                          <  2:918935/149‑1 (MQ=255)                                       ttCCACGCTGCCGGGTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTGTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGAc                                                                                                         <  2:759808/149‑1 (MQ=255)                                               tGCCGGCTACCGACGGCCAGAAATCGTGAGCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCg                                                                                                 <  2:700084/149‑1 (MQ=255)                                                gCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGc                                                                                                <  1:532860/149‑1 (MQ=255)                                                   ggTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCa                                                                                             >  2:819228/1‑149 (MQ=255)                                                    gTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCAt                                                                                            <  2:926812/149‑1 (MQ=255)                                                     ttACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATc                                                                                           <  1:624728/149‑1 (MQ=255)                                                     ttACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACAAATTATCCTCCTCGCTGTCACTACGTTGACTGCCTTCGCTCATc                                                                                           <  2:988621/149‑1 (MQ=255)                                                          gACTGCCAGAAATCGGGATCATCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCAtt                                                                                      <  1:857481/149‑1 (MQ=255)                                                            cggCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTca                                                                                    <  1:22965/147‑1 (MQ=255)                                                                 aGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGTCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAg                                                                               >  1:19357/1‑149 (MQ=255)                                                                 aGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCCCATAg                                                                               >  2:939333/1‑149 (MQ=255)                                                                    aaTCGGGATCGTCACGCCGCTGCAACATCCGCACCCGTTTCGTATCGTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATTCTTCACGCTGCCTCTTCGTTGACTGACTTCGCTCATCCCATTCCCATAGttc                                                                            >  2:944035/1‑148 (MQ=255)                                                                       cGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCt                                                                         <  2:699573/149‑1 (MQ=255)                                                                                 aCGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTGTCTATGCTCATgg                                                               >  2:72879/1‑149 (MQ=255)                                                                                   gccgcTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCCCATGGGa                                                             >  1:111431/1‑149 (MQ=255)                                                                                         gCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGTCCATGGGAGTTCAc                                                       >  2:233924/1‑149 (MQ=255)                                                                                         gCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGGTCAc                                                       >  2:794766/1‑149 (MQ=255)                                                                                                cAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTg                                                >  1:896141/1‑149 (MQ=255)                                                                                                 aGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATTGTTATCTATGCTCATGGGAGGTCACTCAGTTgc                                               >  2:772757/1‑149 (MQ=255)                                                                                                      ccGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCt                                          >  2:795721/1‑149 (MQ=255)                                                                                                           tCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTTACTCAGTTGCCGCCTCGATg                                     >  2:72003/1‑149 (MQ=255)                                                                                                           tCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATg                                     <  2:992598/149‑1 (MQ=255)                                                                                                                    gggCGTAGATGACCACTTAGATCGAAACGGGACGCTGATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCACTTTCACCGAATTCGGAATTCACATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGaa                            <  1:985104/147‑1 (MQ=255)                                                                                                                     tgCGTAGATGACCCCTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAAt                           <  1:907308/149‑1 (MQ=255)                                                                                                                        gTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCAGTCACATAGTTATCTATGCGCATGGGAGTTCGCCCCGTTGCCGCCTCGATGCAACCCAAATGaa                        >  1:1238/1‑148 (MQ=255)                                                                                                                             tGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGCTGACTCCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATTTCgt                   <  2:607141/149‑1 (MQ=255)                                                                                                                              gACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGTATGATTTCgtg                  >  2:345703/1‑149 (MQ=255)                                                                                                                                  aCTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCCTCCCATTCACATAGTTATCTATGCTCATGGGAGTTCCCTCAGTTGCCGCCTCGATGCAACGCGCATGATTTCGAGAAtt              >  1:168819/1‑149 (MQ=39)                                                                                                                                  aCTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACACTGCCACTTCGTTGCCTGCCTTCGCTCAGCCCATGCACAGGGGTAGCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCACCGCGAATGATTTCGTGTagt              >  1:593827/1‑147 (MQ=255)                                                                                                                                   cTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGTCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATGTCGTGTAttt             <  2:19357/149‑1 (MQ=255)                                                                                                                                     aaGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGACTTCGTGTATTTGa           <  2:695103/149‑1 (MQ=255)                                                                                                                                      aGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATTTCGTGTATTTGAg          >  2:597493/1‑149 (MQ=255)                                                                                                                                       gATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATTTCGTGTATTTGAGt         <  1:123523/149‑1 (MQ=255)                                                                                                                                        aTCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATCGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATTTCGTGTATTTGAGTc        >  1:520735/1‑149 (MQ=255)                                                                                                                                        aTCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAGTGATTTCGGGGATTTGAGTc        >  1:146622/1‑149 (MQ=255)                                                                                                                                        aTCGAAACGGGACGCTTATACACTTTATCCTCCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGATCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATTTCGTGTATTTGAGTc        <  2:245163/149‑1 (MQ=255)                                                                                                                                            aaaCGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTTCCGCCTCGATGCAACGCGAATGATTTCGTGTATTTGAGTCatat    <  2:985304/149‑1 (MQ=255)                                                                                                                                              aCGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATTTCGTGTATTTGAGTCATATCa  <  1:869087/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                ACTTCGCGCATGGCAGCTTGCGGCGCGGTTTCACCCTCTTCCACGCTGCCGGTTACCGACTGCCAGAAATCGGGATCGTCACGCCGCTGCAACATCAGCACCCGTTTCGTATCTTGTGCGTAGATGACCACTAAGATCGAAACGGGACGCTTATACACTTTATCCTTCACGCTGCCTCTTCGTTGACTGCCTTCGCTCATCCCATTCACATAGTTATCTATGCTCATGGGAGTTCACTCAGTTGCCGCCTCGATGCAACGCGAATGATTTCGTGTATTTGAGTCATATCA  >  CP009273/1942720‑1943009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.