| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 2,420,353 | A→G | intergenic (‑86/+135) | hisJ ← / ← argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,420,353 | 0 | A | G | 99.2% | 438.4 / NA | 135 | intergenic (‑86/+135) | hisJ/argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (1/0); major base G (66/67); minor base T (1/0); total (68/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 138 total aligned reads displayed.
ACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTA > CP009273/2420207‑2420499 | aCGCCGCAGTTGCGCTGGAGAAGGCAAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGat < 2:331875/149‑1 (MQ=255) gccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCAATGGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGatat > 1:723090/1‑149 (MQ=255) gcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACATGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATccc > 2:1032628/1‑149 (MQ=255) cAGTTGCGCTGGAGTAGGCCAGAACCAGAGAGAGCGCCAGGCACATCTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTTCTGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATtttt > 1:951142‑M2/1‑145 (MQ=255) gTTGCGCTGGAGAAGGCCAGAACCAGTGAGAGCGATAGTACCAGGTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATGTACAGGTTGGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcg > 1:216662‑M2/1‑143 (MQ=255) ttGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcga > 2:688838‑M2/1‑142 (MQ=255) gcTGGAGAAGGTCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaa > 2:1032902‑M2/1‑138 (MQ=255) gcTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgaaaaa < 1:935439‑M2/149‑12 (MQ=255) cTGGTGGAGGCTAGTACCAGTGAGAGCGATAGCTCCAGTTTTTTCATTATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTAACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTa < 1:171632/149‑1 (MQ=255) cTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTa > 2:488996/1‑149 (MQ=255) aaGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacat < 1:1223037‑M2/149‑19 (MQ=255) aaGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACAGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCAGAAAATTGACCATCAAGGCAAGATATACAGCCACGTTAGACGta > 2:872773/1‑149 (MQ=255) gCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgc > 2:1007814‑M2/1‑128 (MQ=255) gCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgc < 2:130027‑M2/149‑22 (MQ=255) gAACCAGAGAGAGCGATAGTACCAGTTTTTTTATATTTTTCTCAACTGAAAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATACAATTAACCACCAAGGCAAGATATCCCGCCCGGTTAGTAGTCTTAtttt > 2:541434/1‑149 (MQ=255) aaCCAGGGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGATAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTAttttt < 2:588168/149‑1 (MQ=255) aaCCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtatt < 2:307196‑M2/149‑27 (MQ=255) aaCCAGAGAGAGCCATAACACCAGTTTTTTCAGAATGTCCGCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTAttttt < 2:230473/149‑1 (MQ=255) cAGAGAGAGCGATAGCACCTGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgat > 1:767207‑M2/1‑120 (MQ=255) cAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCAt > 2:409828/1‑149 (MQ=255) cAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAAAATCCCGCCCCGTTAGACGTATTATTTTTCAt > 1:264199/1‑149 (MQ=255) agagagCGATAGGCCTAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTaa < 1:126394/149‑1 (MQ=255) gagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTaaa > 1:1006895/1‑149 (MQ=255) gCGGTAGCGCCAGTTTTATCATTATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCCTAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATg < 2:222797/149‑1 (MQ=255) tgATAGCACCAGTTGTGTCATATTGCCTTTAACTCACAGTCTTTTTATACGTAATATTTACAGGTTTGTTACACTTCTCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGc < 2:647359/148‑1 (MQ=255) cGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTCCACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCAACCCCGTAAGACGTATTATTTTTCATTAAAAATGc > 1:759554/1‑149 (MQ=255) cGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGc < 1:513843/149‑1 (MQ=255) gATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCt > 1:1045128/1‑149 (MQ=255) atatctccAGTTTTTTCATAATGTCCTCAACTGACAGTTGTTTTATAGGGAATATTTACAGGTTTGTTACACTTAACGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTACTATTTTTCATTAAAAATGCtt < 1:872773/143‑1 (MQ=255) cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATg > 1:731137/1‑149 (MQ=255) cAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGAATTATTTTTCATTAAAAATGCTTAAGTATg > 1:117811/1‑149 (MQ=255) tttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTAAGCATTTc > 1:1142962/1‑149 (MQ=255) ttCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCTCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCa < 1:794733/149‑1 (MQ=255) aTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgata > 1:1107264‑M2/1‑89 (MQ=255) ccTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACg > 2:641502/1‑149 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaag < 2:216982‑M2/149‑67 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATtc < 2:521408‑M2/85‑3 (MQ=255) cAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATa < 1:708774/149‑1 (MQ=255) aaCTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATGAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgattattgattagtttgcataagttctttgctagatcgatagtgaagac < 2:794733‑M2/149‑69 (MQ=255) aaCTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTAATTAAAAATGCTTAAGTATGCAGTTCAATGCACCACGCTAg > 1:496621/1‑149 (MQ=255) cTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTg < 1:641502/149‑1 (MQ=255) taacaGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaac > 2:902093‑M2/3‑78 (MQ=255) tGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAACATTGCCCATCAAGGCTAGATATtttttgataaacgtatattgtgtattgatgcgattgcataattcctttgccagagcgatatcgaagccaac > 1:309962‑M2/1‑78 (MQ=255) tGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaac > 1:542363‑M2/1‑78 (MQ=255) tGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaac < 1:141342‑M2/149‑72 (MQ=255) tGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGc < 2:1071668/149‑1 (MQ=255) cAGTCTTTTAATAGGGAATATTTACAGGTTTGTTACACTTATCGTTCTATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGcaac < 1:229461/149‑1 (MQ=255) tCTTTTTATAGGGAATATTGACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTCGCCGTTTGGCGATACATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa > 1:896722/1‑149 (MQ=255) tttttATAGGGAATATTTACAGGCATGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCATAAGTATGCATTTAAATGAACCACGATAGTGCAACAAAcc > 2:1151250/1‑149 (MQ=255) tttATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgctgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgcct > 2:928706‑M2/1‑68 (MQ=255) atcGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgt > 1:922585‑M2/1‑65 (MQ=255) taGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtg < 1:1162641‑M2/149‑86 (MQ=255) cagGGAATATTGACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtg > 1:45763‑M2/2‑64 (MQ=255) gggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTATTAAGCAGAAGGACGTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGc > 1:1205468/1‑149 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcttcattccttttccagatcgatatcgaagccaaccagttcgccttgtgaat < 1:1147171‑M2/149‑89 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATCTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCa > 2:389220/1‑149 (MQ=255) ggAATATTTACAGGATTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCa > 2:1216618/1‑149 (MQ=255) atatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACATACCTGGCGTGCACCa < 2:731137/149‑1 (MQ=255) tatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttt > 1:307196‑M2/1‑57 (MQ=255) tatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACTACGATAGTGCAACAAACCTGGCGTGCACCat > 1:490509/1‑149 (MQ=255) ttACAGGTTTGTTACACTTATCGTGCTATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttttga > 1:997293‑M2/1‑54 (MQ=255) ttACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaaggcaaccagttcgccttgtggattttttct < 2:430025‑M2/149‑96 (MQ=255) tACAGGTTTGTTACACGTATCGTGACATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGAAACAAACCTGGCGTGAGCCatgatg > 2:102156/1‑149 (MQ=255) aCAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtatgcataattcctttgccagatcgatatcgaagccaaccagttccccttgtgaattttttgatt < 1:55697‑M2/149‑98 (MQ=255) aCAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcaacaaacgtaccttgcgtattgatgcgtttgcataattcctttgccagctcgatatcgaagccaaccagttcgccttttgaattttttcatt < 1:261665‑M2/149‑98 (MQ=255) cAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttttgattc > 2:84449‑M2/1‑51 (MQ=255) aGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCAGTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATc > 2:940652/1‑149 (MQ=255) ttttGTTACACTGATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAt < 2:491236/148‑1 (MQ=255) gTTTGTTACACTTATCGTGCCATAACATTGACCATCAAGGCAAGTTATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaacaagttcgccttgtgaattttttgattcaaa > 1:749955‑M2/1‑48 (MQ=255) tttGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGACGTCCCGCCCCGGTAGACGTATTATTTTTCATTACAAACGCTTAAGTATGCCTTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCAtt < 2:1548/149‑1 (MQ=255) tatatactTCTCTTGCCGTAATATTGCTGATAAAGGCAAGATATttttccacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttttgattcaaatggc > 1:459273‑M2/3‑44 (MQ=255) gTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCa < 2:1206060/149‑1 (MQ=255) gTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTAAATGCACCACGATAATGCAACAAACATGGCGTGCACCATGATAATCATTCCa > 1:1117367/1‑149 (MQ=255) ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttttacttaaaatagcg < 1:265520‑M2/149‑107 (MQ=255) ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCAt < 1:918292/149‑1 (MQ=255) ttACACTTATCGGGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCTTTAGATGTTTTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCAt < 1:401242/149‑1 (MQ=255) tACACTTATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATc < 1:1032628/149‑1 (MQ=255) ttATCGTGCCATAAAATTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttttgattcaaatggcgcatagg < 2:656495‑M2/149‑113 (MQ=255) ttATCGTGCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTa < 2:1140048/149‑1 (MQ=255) gctaTAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAATCCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTc < 2:264199/146‑1 (MQ=255) gCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTATTCGTATTATTTTTCATTAAAAATGCTAAAGTATGCATTACAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTGCAGCTTc > 1:310666/1‑149 (MQ=255) gCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCAAGATGATCATTTCATCAGGTACAGCTTc > 1:220185/1‑149 (MQ=255) ccATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcc > 1:379707/1‑149 (MQ=255) cATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTccc > 2:725400/1‑149 (MQ=255) aTAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCa < 1:20577/149‑1 (MQ=255) tAAAATTGACCATCAAGGCAAGATATCCCGACCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCAGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAg > 1:644661/1‑149 (MQ=255) aaaaTTGACCATCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttttgattcaaatggcgcataggtcgggtcggtac > 2:1162641‑M2/1‑25 (MQ=255) tttGACCATCACGGCAAGTTATCCCGCCCGGTTAGACGTATTATTTTTCATTAAAAATGCTTGAGTATGCATTTCAATGCACCACGATAGTGCAACAATCCTGGCGTGCCCCATGTTGATCATTCCATCAGGTACAGCTTCCCAGCGAc < 2:753648/148‑1 (MQ=255) gACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTa < 2:354892/149‑1 (MQ=255) gACCATCAAAGCAAGTTTTtttttgacaaccgtacattgcgtattgacgcgtttgcataaagcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttttgattcaaatggcgcataggtcgggtcggtaccgatgc > 1:268415‑M2/1‑19 (MQ=255) tccATCAAGGCAAGATCTCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTAt < 2:877658/148‑1 (MQ=255) cATCAAGGCAAGATACCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa > 2:683212/1‑149 (MQ=255) aTCAAGGCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgaattttttgattcaaatggcgcataggtcgggtcggtaccgatgcggat < 1:1127385‑M2/149‑135 (MQ=255) tCAAGGCAAGATATttttcgacaaacgtaaattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttcgccttgcgaatattatgattcaaatggcgcaaaggtcgggtcggtaccgatgcggatg < 1:753648‑M2/149‑136 (MQ=255) tCAAGGCAAGATATCCCGCCCAGTTAGACGTATTATTTTTCAGTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAACCCGGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTAGCAGt < 2:350229/149‑1 (MQ=255) ggCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCAGCACGATAGTTCAACCAACCTGGCGTGCACCATGATGATCGTTCCATCAGGTACAGCTTCCCAGCGCCGTATCAGTCAcc > 2:186902/1‑149 (MQ=255) gCAAGATATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcgaagccaaccagttagccttgtgaattttttgattcaaatggcgcataggtcgggtcggtaccgatgcggatggtttg < 1:391952‑M2/149‑141 (MQ=255) gCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATGTAAACAGTTACAGCTTCCCAGCGACGTATCAGTCACCg < 1:1216618/149‑1 (MQ=255) aagaTATttttcgacaaacgtacattgcgtattgatgcgtttgcataattcctttgccagatcgatatcggagccaaccagttcgccttgtgaatttttgattcaaatggcgcataggtcgggtcggtacggatgcggatgttttgcgg < 1:647359‑M2/149‑143 (MQ=255) aagaTATtcttcgataaacgtacattgcgtattgatacgttttcataattcctttgccagatcgatatcgaagccaaccagttcgccttgtgacttttttgattcaaatggcgcataggtcgggtcggtaccgattcggatgttttgcg > 1:869742‑M2/1‑7 (MQ=255) | ACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGTA > CP009273/2420207‑2420499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |