New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	4285799 =	74 (1.340)	4 (0.070)	4/218	9.1	5.1%	noncoding (77/530 nt)	RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences	RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences
	?	CP009273	= 4286250	NA (NA)					noncoding (528/530 nt)	RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences	RIP321 (repetitive extragenic palindromic) element; contains 9 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGtaggcctgataagacgcggcaagcgtcgcatcaggcatt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4285944‑4285799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCT  <  CP009273/4286250‑4286064                                                                                                                                                                                                                                                                                                                                               tctcgattatgCAGCCTATAGCGCTGACTGGCGTAGGCCTGATAAGACGCGTTAAGCGCCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAG                                                                                                                                                                                          <  2:339737/138‑1 TCACGCTAATGCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCGTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAG                                                                                                                                                                                          <  2:661629/149‑1  CACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGG                                                                                                                                                                                         >  2:887941/1‑149  CACGCTAAATCAGGCTATTGCGCTATCTGGCGTAAGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGa                                                                                                                                                                                         >  1:623742/1‑148     GCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTACGCTGTCTGGCGTCGGCCT                                                                                                                                                                                      >  1:220934/1‑149      CTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATACGCCGCGTTAAGCGTAGAATCAGGCGTTGATGTAGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCATGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGacatg                                                                                                                                                                                     >  1:360276/1‑144       TAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTGAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGA                                                                                                                                                                                    <  2:388036/149‑1         ttgaaagcttcTGCTCTGTTTGGCGTAGGCCTGATACGACGCGGACAGCGCCCCATCAGGCGTTGATGTCGGATGCGGCATAATCGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATA                                                                                                                                                                                  <  2:61643/138‑1          tgCAGGCTATTGCTCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAA                                                                                                                                                                                 <  1:197877/147‑1          ATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAA                                                                                                                                                                                 >  1:406279/1‑149          ATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCACACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGGGTAGGCCTGATAA                                                                                                                                                                                 >  1:1017431/1‑149               GCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTAGTGCGCTGTCTGGCGTAGGCCTGATAAGACGC                                                                                                                                                                            >  1:395594/1‑149                 TATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGG                                                                                                                                                                          <  2:973141/149‑1                 TATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGCCGGATGCGGCATACACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGAGTAGGCCTGATAAGcagcgt                                                                                                                                                                          >  2:688111/1‑143                  ATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGC                                                                                                                                                                         >  2:213733/1‑149                    tctactgttaGGCGTAGGCCTGATAAGACGCGTCATGCGTCGCAGCAGGCGTTGATGGCGGCTGCGGCGTAAACGCCTTATCCGACCTCCAATATCACGCTTATTCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAA                                                                                                                                                                       <  2:1015038/139‑1                    gGCGCTGGCTGGCTTAGGCCTCATAATACGCGTTAAGCGTCGCACCAGGCCTTGATGTCTGATCCCGCCTAAACGCCTTATCCCCCCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAA                                                                                                                                                                       <  2:360276/148‑1                     GCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAG                                                                                                                                                                      <  2:136107/149‑1                        CTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGT                                                                                                                                                                   <  2:675062/149‑1                         tggCTGGGGTAGGCCTGATAAGACGCGTTCAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAGTCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGACAAGACGCGGCAAGCGTC                                                                                                                                                                  <  2:909512/146‑1                         tggCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAAGCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTC                                                                                                                                                                  <  1:1022968/146‑1                          ggCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGTCTGCTAAGACGCGGCCAGCGTCG                                                                                                                                                                 <  2:837816/147‑1                          GTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGTCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCG                                                                                                                                                                 <  2:745006/149‑1                            CTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTA                                                                                                                                                                                           >  1:553378/1‑121                            CTGGCGTAGGCCTGATAAGACGCGGTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTA                                                                                                                                                                                           <  2:553378/121‑1                             cgtCGTCGGCCTGTTAAGACGAGTGAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAAGCAGGCTATTGCGCCGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCAT                                                                                                                                                              <  2:1225883/146‑1                             TGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCAT                                                                                                                                                              >  2:1118121/1‑149                                  TAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGC                                                                                                                                                         <  2:498688/149‑1                                   AGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTGGCATCAGGCA                                                                                                                                                        >  1:427825/1‑149                                          ATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTA                                                                                                                                                                                           >  2:857022/1‑107                                          ATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTA                                                                                                                                                                                           <  1:857022/107‑1                                                 GCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGAGAAGCATCGCACTAGGGATTaaataagggccg                                                                                                                                          >  1:1199358/1‑137                                                      AAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCG                                                                                                                                                                           <  2:151222/111‑1                                                           TCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTA                                                                                                                                                                                           <  2:1137316/90‑1                                                                     ccTTGAGGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGGTAAGACGCGGCAAGCGTCGCATCAGGCGTTGATGTCGGATAAGGCGTTTACGCCGCATCCGA                                                                                                                      <  2:755785/147‑1                                                                               GGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCA                                                                                                                                                                        >  1:1109707/1‑89                                                                               GGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCACTGTCTGGCGTAGGCCTGATAAGACGCGGCA                                                                                                                                                                        <  2:1109707/89‑1                                                                                      gcgTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAG                                                                                                                                                                      <  2:746869/81‑1                                                                                      GCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTA                                                                                                                                                                                           <  1:634087/63‑1                                                                                      GCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTA                                                                                                                                                                                           >  2:634087/1‑63                                                                                              GCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCG                                                                                                                                                                           <  1:810077/71‑1                                                                                              GCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCG                                                                                                                                                                           >  2:810077/1‑71                                                                                                 TTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCTGACGGGGTGGAAACGCCTTATCCGCCCCACAAAATCACGCGCAATCAGGCGAT                                                                                          >  2:618085/1‑149                                                                                                       GACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGACGCGGCGTAAACGCCCTACCCGACCTACAAAATCACGCCAACTCAGGCaagtgtgcc                                                                                    >  2:1053816/1‑140                                                                                                            ACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGA                                                                                                                                                    >  1:621935/1‑80                                                                                                                AATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGC                                                                                                                                                                            <  2:201321/52‑1                                                                                                                AATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGC                                                                                                                                                                            >  1:201321/1‑52                                                                                                                                             CTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAG                                                                                                                                                           <  1:58987/40‑1                                                                                                                                             CTGGCGTAGGCCTGATAAGACGCGGCAAGCGTCGCATCAG                                                                                                                                                           >  2:58987/1‑40                                                                                                                                                      GCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTT                                     <  1:918391/149‑1                                                                                                                                                      GCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTT                                     <  2:868037/149‑1                                                                                                                                                      GCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGG                                                                                              >  1:144381/1‑92                                                                                                                                                      GCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTCATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGACGTAGGCCTGATAAGACGCGTTCAGCGTCGCATCAAGCGTT                                     >  1:474775/1‑149                                                                                                                                                      GCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCG                                                                                                                                         >  1:228518/1‑49                                                                                                                                                      GCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCG                                                                                                                                         >  1:228363/1‑49                                                                                                                                                       ccgGATAAGACGCGGCAAGGGGCGCATCAGTCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTG                                    <  1:1149520/146‑1                                                                                                                                                        CTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTA                                                                                                                           >  1:609205/1‑61                                                                                                                                                         TGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGAT                                  <  2:544949/149‑1                                                                                                                                                            TAAGACTGGGGATGCGGCGCGTCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTC                               <  2:541270/149‑1                                                                                                                                                             AAGACGCGGCGAGTGTCGCATCAGGCATTGTTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCG                              <  1:199793/149‑1                                                                                                                                                             AAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCG                              >  1:973141/1‑149                                                                                                                                                             AAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGAT                                                                  >  1:148404/1‑113                                                                                                                                                              AGACGTGGCAAGCGTCTCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGG                             <  1:411274/149‑1                                                                                                                                                               GACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGA                            >  1:332065/1‑149                                                                                                                                                                ACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAAGCCTGATAAGACGCGGTAAGCGTCGCATCAGGCGTTGATGTCAGAT                           >  2:867153/1‑149                                                                                                                                                                 CGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTA                                                                                                                  >  2:597464/1‑61                                                                                                                                                                  GCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGC                         <  2:332065/149‑1                                                                                                                                                                   CGGCAAGCGTCGCATCCGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAAGCAGGCTATTGCGCTGTCTGGTGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCG                        <  1:680026/149‑1                                                                                                                                                                   CGGCAAGCGTCGCATCAGGCCTTGATTTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCG                        <  2:559423/149‑1                                                                                                                                                                   CGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCG                        <  2:816693/149‑1                                                                                                                                                                   CGGCAAGAGCCGTATCAGTCATTGATGTCGGATGCGGCGTAAACGTCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCG                        <  2:1108781/149‑1                                                                                                                                                                    GGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGG                       >  1:1006040/1‑149                                                                                                                                                                             tGCATCAGGCATGGATGGGGGATGGGGCGCAAACGCCTTATACGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTTTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCATGCGTTGATGTCGGATGCGGCATAAACGC              <  1:741015/148‑1                                                                                                                                                                             aGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGC              <  1:568596/148‑1                                                                                                                                                                               CATCAGTCATTGATGTCGGATGCTGCGTAACCGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCTCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCT            <  2:1187910/149‑1                                                                                                                                                                               CATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTTATGCCGCATCCGACATCAACGCCT            <  1:1060200/149‑1                                                                                                                                                                                 TCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCG                              >  2:1052646/1‑129                                                                                                                                                                                 TCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCG                              <  1:1052646/129‑1                                                                                                                                                                                  acggctcTGATGTCGCACGCGGCCTAAACGCCTTATCCGACCTACAACATCAAGCTAAATGCGGCTATTGCGCTGTCTGGCGTAGGCCAGATAAGACGCGTTAAGGGCCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTAT         <  2:538496/142‑1                                                                                                                                                                                   AGGAATTTATTTCGGATGCGGCGTAAACGTCTTGTCCGACTTACAAAAGCAAGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATC        <  1:104562/149‑1                                                                                                                                                                                    GGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCC       >  2:1193976/1‑149                                                                                                                                                                                     GCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTT                                                        <  2:503842/99‑1                                                                                                                                                                                     GCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTT                                                        >  1:503842/1‑99                                                                                                                                                                                         TGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCT  <  2:1031863/149‑1                                                                                                                                                                                                                                                                                                                                               TCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGtaggcctgataagacgcggcaagcgtcgcatcaggcatt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  CP009273/4285944‑4285799 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGGCCTGATAAGACGCGGCAAGCGTCGCATCAGGCATTGATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATCAGGCTATTGCGCTGTCTGGCGTAGGCCTGATAAGACGCGTTAAGCGTCGCATCAGGCGTTGATGTCGGATGCGGCATAAACGCCTTATCCGACCT  <  CP009273/4286250‑4286064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.