| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,371,135 | G→T | intergenic (‑356/+39) | sspA ← / ← rpsI | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,371,135 | 0 | G | T | 98.6% | 206.0 / NA | 74 | intergenic (‑356/+39) | sspA/rpsI | stringent starvation protein A, phage P1 late gene activator, RNAP‑associated acid‑resistance protein, inactive glutathione S‑transferase homolog/30S ribosomal subunit protein S9 |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base T (39/33); total (41/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGTTCAG > CP009273/3370989‑3371280 | gaTGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGGGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGttt < 1:731936/149‑1 (MQ=255) aTGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGtttt < 2:1092608/149‑1 (MQ=255) tGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTtttt < 2:385206/149‑1 (MQ=255) tgcTTTAGTCTTAAATAGGTGCGTTAGTCCCTTTTTGGCAATGTGGTTTTTGTTTTAAATAAATTTTAGGTGGCAGCAAAAGGCAATTTTCCAGTTTTTACGCTGACTCAGATTTTCGCTATAAAAAAACCCGCCGAAGCGGTtttttt < 1:327540/148‑1 (MQ=255) gcgttggTCTGAAATAGTTCACTTCGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCGTTCAGGTGGCAGCAACAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAATCCCGCCGAAGCGGTTTTTTTc < 2:691328/143‑1 (MQ=255) ttcgAAATAGTTGACTTAGTCCCTTTTTGGCGATGGGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAATCCCGCCGAAGCGGTTTTTTTCGAAAAtt < 2:141789/146‑1 (MQ=255) tCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCCGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGCAGCGGGTTTTTTCGAAAAtt > 1:5036/1‑149 (MQ=255) tGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGt > 2:528488/1‑149 (MQ=255) tGAAATAGTTGACTTAGTCCCTTAGTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAAttat > 1:1037151/1‑147 (MQ=255) gAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAATGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGtt > 2:236149/1‑149 (MQ=255) aaTAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGtttt > 2:814065/1‑149 (MQ=255) gTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGc < 1:967723/149‑1 (MQ=255) ttGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTGTTTTTCGAGAATTGTTTTCTGcc > 2:911597/1‑149 (MQ=255) tGACTTAGTCCCTTATGGGCGATGTTGTTTTTGTTCTACCTGTCTGGCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCg < 1:49927/149‑1 (MQ=255) aCTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGAAAAAAGCAACTATCCAGTTTTTACGCTGATTCAGAGTTTAGCTCTAAAAAAACCCGCCGAAGCGGTGTTTTTCGAAAATTGTTTTCTGCGGGa > 2:533741/1‑149 (MQ=255) aCTTAGTCCCTTATTGGCGATGTGGTGTTTGTTTTACCTGTCGGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCATATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTTCCGGa < 2:979469/149‑1 (MQ=255) aGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAg > 1:924477/1‑149 (MQ=255) tCCCTTATTGGCGATGTGGTTTTTGTTTTACCGGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGaa < 1:765164/149‑1 (MQ=255) tccTTATTGGCGATGTGGTTTTTGTCTTACCTGTCTGTCAGGATGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGTCGTAGTGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAg < 2:697410/148‑1 (MQ=255) ccTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCTGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGc > 1:934545/1‑149 (MQ=255) ccTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGc > 1:1239836/1‑149 (MQ=255) cTTATTGGCGATGTTGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTTGCTATAAAAAAGCCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGcc < 2:721438/149‑1 (MQ=255) tGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTATTTTTCGAAAATTCTTTTCTCCCGGAGCAGAACCCAATTa > 2:663435/1‑149 (MQ=255) ggCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAAATTTCCAGTTTTTACGCTGATTCAGATTTTGGCTATAAAAAAACCCGCCGAATCGGTTTTTTGCCATAATTATTTTATGCAGGGGCAgtgactaatatg > 1:637642/1‑138 (MQ=255) cGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACg > 2:809355/1‑149 (MQ=255) aTGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGtt > 1:59684/1‑149 (MQ=255) gtgGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTg > 2:661806/1‑149 (MQ=255) tgGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCCAAACTTGTTTTCTGTCGGATCTGAAGCCCATTAACGTTTgg > 1:73977/1‑149 (MQ=255) ttttGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGgagag > 1:252207/1‑148 (MQ=255) ttGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACt < 1:1288120/149‑1 (MQ=255) ttttACCTGTCTGTCAGGTGGCAGCAAAAAGCACCTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGGGCAGAAGCCAATTAACGTTTGGAGAACcgcg > 2:1149730/1‑149 (MQ=255) ttttACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCg > 1:1149791/1‑149 (MQ=255) ttACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGga < 1:932073/149‑1 (MQ=255) tACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgac < 1:540868/149‑1 (MQ=255) aCCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGACGCGGTTTTTTTCGAAAATTGTTTTCAGCCGGAGCAAAAGCCAATTAACCACTAGAGAACGGCGcacg > 2:275117/1‑149 (MQ=255) ctgtctgtCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTATAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTACCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacgac > 2:1022487/1‑149 (MQ=255) gtctgtcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGTTTACTTTTGTATCTATAAAAAAACCCGCCGAAGCGGTTGTTTTCGAAAATTGTTTTCCGCCGGAGCAGAAGCCAATCAACGTTTGGAGAACTGCGgacgacgc > 2:920241/1‑148 (MQ=255) gtctgtcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGCAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGgacgacga < 1:643148/149‑1 (MQ=255) gtcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGAGGACGTg > 1:997125/1‑149 (MQ=255) tgaGGTGGCAGCAAAAAGCAACTTGCCAGTTTGTACGCTGATTGAGATGTTGGTGATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGc < 2:1195340/147‑1 (MQ=255) tcAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGc < 1:762884/149‑1 (MQ=255) cAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGGTTGGAGAACTGCGGACGCCGACGTGCt > 1:156295/1‑149 (MQ=255) gTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGGGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTa > 1:532482/1‑149 (MQ=255) tGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGCACAGTAATTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAGCTGCGGACGACGACGTGCTTTAc > 1:328082/1‑149 (MQ=255) ggCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAACCCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACg < 2:904196/149‑1 (MQ=255) agcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAg > 2:454934/1‑149 (MQ=255) gcaAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGa > 2:765572/1‑149 (MQ=255) aaaaaGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGGAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTCACGTTTGGAGCACTGCGGACGACGACGGGCTTTACGcgcacc > 1:1350337/1‑144 (MQ=255) aaaGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGa > 2:1265220/1‑149 (MQ=255) gCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACtt < 2:147467/149‑1 (MQ=255) cAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACttt < 1:1312942/149‑1 (MQ=255) aaCTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTc > 1:474412/1‑149 (MQ=255) cTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTCACGTTTGTAGAACTGCGGACGACGACGGGCTTTACGCAGACCGACTTTCtt > 1:608196/1‑149 (MQ=255) tttCCAGTTTTTACGCTGATTCGGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCGGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTa < 2:2249/149‑1 (MQ=255) tttCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTa < 1:740891/149‑1 (MQ=255) ttCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTAc < 1:570620/149‑1 (MQ=255) cattttttACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGtt < 2:896584/146‑1 (MQ=255) aGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGtta > 1:166093/1‑148 (MQ=255) tttttACGCTGATTCAGATTTTATCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCaa < 1:661806/149‑1 (MQ=255) ttttcACGCTGTTCCAGATTTTAGCTATAAAAAAACCCGCAGAAGCGGTTGTTTTCGACAGTTGTTTTCTGCCGGAGCAGAATCCAATTAACGTTTGGAGCACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCaa < 2:680200/149‑1 (MQ=255) cTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGa < 1:444842/149‑1 (MQ=255) tGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGCCGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAg > 2:47005/1‑149 (MQ=255) gATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGc > 2:1102047/1‑149 (MQ=255) tCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGAATTTTTGTAAAATTGTTTTCTGCCGAAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGAGTTTCTTACGTTCAACCTGACGAGCGTc > 1:335959/1‑149 (MQ=255) cAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGCCa > 2:917701/1‑149 (MQ=255) aGATTTTAGCTATAAAAAAACCCGCCGAAGCGGTGTTTTCCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCAc < 2:73977/149‑1 (MQ=255) ttAGCTATAAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTa < 2:632023/149‑1 (MQ=255) tataAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGaa < 2:864443/149‑1 (MQ=255) ataAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAg > 2:406014/1‑149 (MQ=255) ataAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGATTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAg > 1:1192476/1‑149 (MQ=255) taAAAAAACCCGCCGAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGGAACGAAGc > 1:166781/1‑149 (MQ=255) aaaCCCGCCGAAGCCGTTTTTTTCGAAAATTGTTCTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCt < 1:377132/149‑1 (MQ=255) ccgccgAAGCGGTTTTTTTCGAAAATTGTCTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTAc > 1:666820/1‑149 (MQ=255) cgccgAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACg < 1:1210954/149‑1 (MQ=255) cgAAGCGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAg < 1:454934/149‑1 (MQ=255) cGGTTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACCGAGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGCGCGTCACGAGTAACGAAGCCAGCTTTACGCAGTTCAg < 1:809355/149‑1 (MQ=255) | GATGCGCTTTAGTCTGAAATAGTTGACTTAGTCCCTTATTGGCGATGTGGTTTTTGTTTTACCTGTCTGTCAGGTGGCAGCAAAAAGCAACTTTCCAGTTTTTACGCTGATTCAGATTTTAGCTATAAAAAAACCCGCCGAAGCGGGTTTTTTCGAAAATTGTTTTCTGCCGGAGCAGAAGCCAATTAACGTTTGGAGAACTGCGGACGACGACGTGCTTTACGCAGACCGACTTTCTTACGTTCAACCTGACGAGCGTCACGAGTAACGAAGCCAGCTTTACGCAGTTCAG > CP009273/3370989‑3371280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |