| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC JC | CP009273 | 3,178,254 | IS5 (+) +4 bp | 54.3% | coding (56‑59/291 nt) | yqiC → | BMFP family putative fusogenic protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2282398 = | NA (NA) | 12 (0.840) | 11/272 | NT | 59.3% | noncoding (1195/1195 nt) | IS5 | repeat region |
| ? | CP009273 | 3178254 = | 8 (0.580) | coding (56/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
| * | ? | CP009273 | = 2283592 | NA (NA) | 7 (0.490) | 7/274 | NT | 45.9% | noncoding (1/1195 nt) | IS5 | repeat region |
| ? | CP009273 | = 3178257 | 8 (0.570) | coding (59/291 nt) | yqiC | BMFP family putative fusogenic protein | |||||
ACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCG > CP009273/3178112‑3178399 | aCGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTaa > 2:72182/1‑146 (MQ=255) gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAgg < 2:7529‑M2/14‑1 (MQ=255) atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGa > 1:15850‑M2/126‑150 (MQ=255) gTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAg > 2:232811/1‑146 (MQ=255) aacggtctaaataggctgattcaaagcatgtacggaagaaaaaatcggctcaaagatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGgag > 1:145736‑M2/116‑150 (MQ=255) cggtctaaataggcagattcaaggcatttacgggagcatcaatagggtcaaccatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGaa < 1:115206‑M2/37‑1 (MQ=255) aataggctgattcaaggcatttacgggagaaaaaatcgactcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGaaaaa < 2:80597‑M2/40‑1 (MQ=255) ttCTCTCACTACAATGGCACTCAACACCTCTCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCCCGCCAGGTTCCCGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtca > 1:5057‑M2/1‑108 (MQ=255) gctgattcaaggcattgacgggagaaaaaatcggcccaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATcc < 2:89178‑M2/45‑1 (MQ=255) gccgaatcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCa < 1:78954‑M2/49‑1 (MQ=255) caaggcatttacgggagaaaaaatcagctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGATAAAAATCCGCCAaacccgt > 1:195446‑M2/95‑148 (MQ=255) aacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCCGGGAGTTCGGGGGAGATGTGGAGACAAAAATCCGCCAAACCCTACAAGCGCAg > 1:184651‑M2/86‑150 (MQ=255) tCAACACCTATTAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGc < 1:223154/150‑1 (MQ=255) acagctgacagtaaaggGAAGCGACAATGAATGACCCGAAAAAAATTGAGCAAAGCGCTCGCCAGGGTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcctgtttgtcatctggagccatagaacagg > 2:26846‑M2/9‑85 (MQ=255) cTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCAAAGGTCAGGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatca > 1:192376‑M2/1‑81 (MQ=255) atcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCg < 1:84019‑M2/78‑1 (MQ=255) aCAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGAcc < 1:82285/150‑1 (MQ=255) cAGGGAAACTACAATGATTGACCCGTAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCAAAACCCTACAAGCGCAGCTGACGCGCCTCGACCt < 1:167719/150‑1 (MQ=255) gAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCt < 2:67231/146‑1 (MQ=255) aTTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAACAATCCGCCAACCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAGGCCGTGa > 2:69820/1‑146 (MQ=255) gACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtgcctgatatgagatcatgtttgtcaccaggagccatagaacagggtgcatcatgagtcatccacttaccttcgccg < 2:127190‑M2/146‑94 (MQ=255) aaaaaaTTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGAAATCCGGAAGTTCGGGAAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTcc > 1:117313/1‑150 (MQ=255) cgctcgcCAGGTTCACGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcaacagcttaccttccccgaccgtgaattcagcagtaagcgccgtc < 1:245863‑M2/150‑121 (MQ=255) ccAGGTTCTCGAAGCAATGCCTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAACCCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTAc < 2:174557/146‑1 (MQ=255) cgcttattcgccccttccCTAAAGGAATGAGGGAGTTCGGGGAAGATGAGCAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGTCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACgg < 2:127249‑M2/128‑1 (MQ=255) ttCAAGAATCAATGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaa > 1:236021‑M2/1‑19 (MQ=255) ttcgcaccttccCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGaaa > 1:208442‑M2/13‑150 (MQ=255) aaTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct > 1:241289‑M2/1‑9 (MQ=255) cTAAAGGAATCAGGGAGTTCGGGTAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCACCTCGACCTTGTAACCCGTGAAGAGTTCGACGTCCAAACGCCAGTCCTGTTACGGACCCGGGAACACCTGgcc > 2:98758/1‑145 (MQ=255) | ACGCATAGCTTCACATAATTCTGGTTTATGACTTACCCTTATCGCACTACAATGGCACTCAACACCTATCAGTACAGGGAAACTACAATGATTGACCCGAAAAAAATTGAGCAAATCGCTCGCCAGGTTCACGAATCAATGCCTAAAGGAATCAGGGAGTTCGGGGAAGATGTGGAGAAAAAAATCCGCCAAACCCTACAAGCGCAGCTGACGCGCCTCGACCTTGTAAGCCGTGAAGAGTTCGACGTCCAAACGCAAGTCCTGTTACGGACTCGTGAAAAACTGGCG > CP009273/3178112‑3178399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |