| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 3,969,337 | G→T | E278* (GAG→TAG) | wecE → | TDP‑4‑oxo‑6‑deoxy‑D‑glucose transaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,969,337 | 0 | G | T | 98.7% | 229.9 / NA | 77 | E278* (GAG→TAG) | wecE | TDP‑4‑oxo‑6‑deoxy‑D‑glucose transaminase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base T (37/39); minor base A (0/1); total (37/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCCAGCTATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCGAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTACATTCCGCTG > CP009273/3969196‑3969477 | tCCAGCTATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAg > 1:482056/1‑144 (MQ=255)tCCAGCTATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGCCGAAAGCCGGGCGTATCTAGCTGcc < 2:521264/149‑1 (MQ=255) cAGCTATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAGCTGGCAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTAGACCTGCGACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGt > 2:751742/1‑149 (MQ=255) cAGCTATTTGATGTCCGATCTGCAAGCTGCATACCTGGGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCt < 1:740124/144‑1 (MQ=255) cTATTTGATGTCCGATCTGCAAGCTGCATCCCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGa < 2:425837/149‑1 (MQ=255) cTATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGcc < 1:826724/144‑1 (MQ=255) tATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCTCTGTGGCAAACCTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCg < 1:243041/144‑1 (MQ=255) tATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTCCCg > 1:209880/1‑144 (MQ=255) tttGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTc > 2:515837/1‑149 (MQ=255) tttGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTc > 2:77231/1‑149 (MQ=255) gATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGGCGATTCCCg > 2:485458/1‑149 (MQ=255) tCCGAGCTGCAAGCTGCAGTCCTTTGGGCGCAACTGGACGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTccc < 1:857403/144‑1 (MQ=255) gcaTCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAACACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGa < 1:869243/142‑1 (MQ=255) cGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTGTCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGGAAGCCGGGCGTCTCTAGCTGCCGTCGGTTTCCGa > 1:591210/1‑144 (MQ=255) aTCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTTCGAAGCGTTGTCGCCTCTGTCTAAAGCCGGGTGTATCTAGCTGCCGTCGATTCCCGATGGCTGc > 2:40220/1‑149 (MQ=255) aTCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGc > 2:175293/1‑149 (MQ=255) cTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGc < 1:389948/144‑1 (MQ=255) cTGCCTACCTGGGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAACCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGc < 1:710244/144‑1 (MQ=255) cATACCTGTGGGCGCAACTGGAAGCAACGGATCGTATCAACCAGCAACGTCGGGCGCTGTGGCAAAACTACTACGCTGCGTTAGGGCCGCTGGCGAAAGCCGGGCGTAGCTAGCTGCCGTCGATTCCCGAGGGCTGCGGGCAGa > 1:415453/1‑144 (MQ=255) aTACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACgcgc < 2:15265/149‑1 (MQ=255) aCCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAAcg > 1:661634/1‑144 (MQ=255) tgtgGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACgcgc < 1:80046/144‑1 (MQ=255) tgtgGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACgcgc < 1:435484/144‑1 (MQ=255) tgtgGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACgcgc < 1:542474/144‑1 (MQ=255) gtgGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGCCTGCGTGCAGAACGCGCa > 1:713287/1‑144 (MQ=255) cAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTc > 1:631488/1‑144 (MQ=255) aaCTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTCCTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCt > 1:269675/1‑144 (MQ=255) aaCTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAAGGCGCATATGTTCAACAtt > 2:102870/1‑149 (MQ=255) tGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACa > 1:321394/1‑144 (MQ=255) gggAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCCGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGAGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGTGCATATGTTCTACa < 1:576155/143‑1 (MQ=255) gAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTGCTACAtt > 1:237355/1‑144 (MQ=255) aaGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTg > 2:773309/1‑149 (MQ=255) ggATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCg < 1:902636/144‑1 (MQ=255) gATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGACTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGCACGCGCATATGTTCTCCCTTGAACTGCga > 1:887617/1‑143 (MQ=255) tATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGatat > 1:96472/1‑144 (MQ=255) aaacAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGatat > 1:297136/4‑144 (MQ=255) tCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGAc > 2:105643/1‑149 (MQ=255) aaCCAGCCACGGCTGGCGCTGTGGCAAAACTACTACGTTGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCTGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATtgat < 1:350484/144‑1 (MQ=255) aCCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCgg > 2:40811/1‑149 (MQ=255) ccAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGa < 2:924694/149‑1 (MQ=255) aCGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAg < 1:207440/144‑1 (MQ=255) tCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGa > 2:914571/1‑149 (MQ=255) tGGCGCTGTGGCAAAACTGCTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAATCTGCGGGATATTGATGACCGGAGCGCGTTGAtt < 2:659972/149‑1 (MQ=255) ttccgatctgaaaaCTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTaa < 2:229324/139‑1 (MQ=255) cgcTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGa < 1:845649/144‑1 (MQ=255) gtgGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTaa < 1:69975/144‑1 (MQ=255) gtgGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTaa < 1:573619/144‑1 (MQ=255) gtgGCAAAACTACTACGAGGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTaa < 1:42529/144‑1 (MQ=255) tgGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACGTTATACTGCGGGATATTGATGACCGGGGCGGGTTGATTAGCTTTCt > 2:616472/1‑149 (MQ=255) tgGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCt < 2:44771/149‑1 (MQ=255) tgGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCt > 2:166552/1‑149 (MQ=255) cggCAAAACTGCTACGAGGCGGTGGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCCGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAgagtgctcaggtgc < 1:8898/143‑14 (MQ=255) gCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACtt > 1:484402/1‑144 (MQ=255) caaacctccgccggtGCGTTGCCGCCGCTGGCGAAAGCCGGTGGTATCTAGCTGCCGGCGAGTCCCGATGGCTGCGTGCAGATCGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACttt < 1:815776/130‑1 (MQ=255) cAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACttt < 1:179236/144‑1 (MQ=255) aaacCTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAAcagat > 1:208658/1‑140 (MQ=255) aaaaCTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGACGTCGATTCCCGATGGCTGCGTGCAGAACGAGCATATGTTCTACATTAAACTCCGGAGTATTGTAGACCGGCGCGAGTCGATTAACTTTc > 1:244791/1‑144 (MQ=255) tacGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGa > 2:909078/1‑149 (MQ=255) cGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGAGATTGATGACCGGAGCGCGTTGGTTCACTTTCTGAAAGAAGc > 1:161224/1‑144 (MQ=255) aTGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCgg > 1:444248/1‑144 (MQ=255) cGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATg < 2:291458/149‑1 (MQ=255) cGTTAGCGCCGCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATg < 2:687162/149‑1 (MQ=255) gTTAGCGCCTCTGGCGAAAGCCGGGCGTATCTTTCTTCCCGCGATTCCCGAGGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAAt > 1:204964/1‑144 (MQ=255) gTTAGCGCCTCTGGCGAAAACCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAGGCGGaaaa > 1:59161/1‑143 (MQ=255) ttAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGc < 2:37565/149‑1 (MQ=255) ttAGCGCCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGGCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGAGTAACTTTCTGAAAGAAGCGGAAATCATGGc < 2:540008/149‑1 (MQ=255) aGCGCCTCTGGGGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCAt < 1:348255/144‑1 (MQ=255) gcCTCTGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGc < 1:804683/144‑1 (MQ=255) tGGCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCAt > 2:27075/1‑149 (MQ=255) gCGAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTa > 2:724939/1‑149 (MQ=255) gAAAGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTACa < 2:994217/149‑1 (MQ=255) aaGCCGGGCGTATCAAGCTGCCGTCGATTCCCGATGGCTGCGTGTAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAACCGGAAATCATGGCGGTGTTTCATTACAtt < 2:727721/149‑1 (MQ=255) aggcGGGCGTACCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTa < 1:628195/141‑1 (MQ=255) aGCCGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTGCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTa < 1:781809/144‑1 (MQ=255) cGGGCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTTGAAGAAGCGGAAATCATGGCGGTGTTTCATTACAt < 1:667418/144‑1 (MQ=255) gggCGTAGCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTATACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTACATTCCGCt < 2:879028/149‑1 (MQ=255) ggCGTATCTAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGTCTGGAGCAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTACATTCCGCTg > 2:751977/1‑149 (MQ=255) | TCCAGCTATTTGATGTCCGATCTGCAAGCTGCATACCTGTGGGCGCAACTGGAAGCAGCGGATCGTATCAACCAGCAACGTCTGGCGCTGTGGCAAAACTACTACGATGCGTTAGCGCCTCTGGCGAAAGCCGGGCGTATCGAGCTGCCGTCGATTCCCGATGGCTGCGTGCAGAACGCGCATATGTTCTACATTAAACTGCGGGATATTGATGACCGGAGCGCGTTGATTAACTTTCTGAAAGAAGCGGAAATCATGGCGGTGTTTCATTACATTCCGCTG > CP009273/3969196‑3969477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |