| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | 2455823 = | 2 (0.040) | 43 (0.910) | 36/296 | 0.3 | 95.6% | coding (1039/1341 nt) | fadL | long‑chain fatty acid outer membrane transporter |
| ? | CP009273 | 3576788 = | NA (NA) | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA | |||||
AATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGG > CP009273/2455678‑2455963 | atagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaccagaagccactggagcacctcaaaaaaaccatcatacactaaatcagtaagttggcagcatccccAAAg < 1:352128‑M1/4‑1 (MQ=255) tagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGa > 2:640835‑M1/145‑149 (MQ=255) tgtgGGATGTGTCAGGTTCTAATCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGAt < 2:313887/149‑1 (MQ=255) gtgGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGacg > 1:197386/1‑147 (MQ=255) cgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGc > 1:443550‑M1/142‑149 (MQ=255) gAAGTGTCATGTTATATCCGGGTTCATCCACAGTGGGCGATTCACTCTAGCCTGGCTTACACGAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGACACATGAAGGCTTTAAAGATGCTgg < 1:660006‑M1/149‑3 (MQ=255) gtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACGATGCTTACCGc < 2:482915‑M1/15‑1 (MQ=255) cAGTTTATAACCGTGATGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgac < 2:293504‑M1/149‑10 (MQ=255) cAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgac > 2:500146‑M1/1‑140 (MQ=255) ggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacagccgggacagcagatacaaacagaagccacacgagcacctcaaaaacaccagcatacactagatcagaaagttggcagcatcaccAAAGATGCTTACCGCATcg < 1:451995‑M1/19‑1 (MQ=255) ggctcttgccgttacgcaccaccccgtcagtagctgaacaggggggacagctgatagacacagaagccactggaggacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTg > 1:28676‑M1/126‑149 (MQ=255) gcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTgg > 1:639942‑M1/125‑149 (MQ=255) gcttttgccgttacgcaccaccccggcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTgg > 2:307242‑M1/125‑149 (MQ=255) aCCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccgactta > 2:380303‑M1/1‑131 (MQ=255) ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTAc < 2:620963‑M1/29‑1 (MQ=255) gccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTtgggtggca < 2:431500‑M1/31‑5 (MQ=255) gATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagt > 1:330788‑M1/1‑123 (MQ=255) aTCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgcctccaacttattgatagtg > 1:707183‑M1/1‑122 (MQ=255) gcagaaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacacgatcatacactaaatcagtaagttggcagcataacgAAAGATGCTTACCGCATCGCGTTGGGTACCAATTATtac < 1:687818‑M1/39‑1 (MQ=255) gcacctccccgttaggagctgaacaggagagacagctgatagaaacagaagccactggagcacctcaaaaacaccagcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATtac > 2:146943‑M1/111‑149 (MQ=255) caccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccataatacactaaatcagtaagtggacagcagcaccCAAGATGCTTACCGCGTCGCGTTGGGAACCACCGATTGCTACg < 1:610985‑M1/43‑1 (MQ=255) ggCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttc < 2:330788‑M1/149‑38 (MQ=255) cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACgatg < 2:551083‑M1/46‑1 (MQ=255) gCGATACAATATAACATGGCATACACCATCTGGAGTCAGTTTCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttca < 1:533681‑M1/149‑39 (MQ=255) ccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcaccgcaaaaacaccatcatacactaaatcagtaagttggcagcatcgccAAAGATGCTTACCCCATCGCGTTGGGTACCACTTATTACTACgttga < 1:507006‑M1/47‑1 (MQ=255) aCTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGATggtaatgactccaacttattgatagtgttttatgttcagataatg > 2:21214‑M1/1‑104 (MQ=255) tGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgtccagataatgcccgatgac > 2:28730‑M1/1‑95 (MQ=255) agggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTAcc > 2:387799‑M1/84‑149 (MQ=255) ttACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg > 1:577541‑M1/1‑91 (MQ=255) gactgcagctgGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGGGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt < 1:668328‑M1/144‑60 (MQ=255) accccagcTGGCGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtc < 2:640247‑M1/146‑61 (MQ=255) cacCAGCTGGAGTCAGTTCCGGCAGCTGAAAGCGACCTCAACCAGTTGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 2:23614‑M1/149‑62 (MQ=255) cacCAGCTGGAGACAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaccctattgatagtgttttacgttcagataatgcccgatgacttagtca > 2:400813‑M1/1‑88 (MQ=255) acCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCGGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgaggactttgtcat > 1:235704‑M1/1‑87 (MQ=255) ccAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAATATTCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatg < 2:685123‑M1/149‑64 (MQ=255) ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGc < 1:481905‑M1/74‑1 (MQ=255) aGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca > 1:486033‑M1/1‑84 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCtt < 2:516431‑M1/77‑1 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGATACAACTTATTACTACGATGATACATGAACCTTCCGTACCGGTATGGCATTtgat < 2:591650‑M1/81‑1 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAACGATGCTTACCGCCTCGCGTTGGGTTCCACTTATTAATACGATGATAACTGGACCTTCCGAACCAGTAACGCCTTtgatga < 2:208553‑M1/83‑1 (MQ=255) acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTtgatga < 2:437343‑M1/83‑1 (MQ=255) ttCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagcttcaccgatt > 2:166790‑M1/1‑72 (MQ=255) ccAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgataatattcggttagctttgaatgcccgattgctttgtcatgcagctccaccgatttt > 2:756467‑M1/1‑70 (MQ=255) gccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACGGGTATAGCCTTTGATGACAGccc < 2:655998‑M1/89‑1 (MQ=255) cagcagCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttg > 2:633793‑M1/1‑69 (MQ=255) caccggagcacctacaaaacaccatcacacaccaaatcagtaagttcgcaacatcaccAAAGATGCTTCCCGCATCGCGTTGGGTACCACTTATTACTACTATCATAACCGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAg > 1:140003‑M1/59‑149 (MQ=255) actggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGATACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGt < 2:257709‑M1/92‑1 (MQ=255) ctggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcagcaccAAAGATGCTTACCGCATCGCGGTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGtt > 2:363361‑M1/57‑149 (MQ=255) ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTGCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTcc > 1:514138‑M1/55‑149 (MQ=255) cTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcgtgcagctccaccgattttgagaacg > 1:485495‑M1/1‑63 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCt < 2:633305‑M1/96‑1 (MQ=255) gAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttcctcatgcagctccaccgattttgagaacgac > 1:304029‑M1/1‑61 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGcaca < 1:327446‑M1/101‑1 (MQ=255) aCCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgact > 1:733143‑M1/1‑54 (MQ=255) aacaccatcatatactacatctgtatgttgtcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGt > 2:37896‑M1/42‑149 (MQ=255) cAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtccc > 2:695035‑M1/1‑46 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCAGTTATTACTACGATGATAACTGGAACTTCCGTCCCGGTATCGCCTTTCATGACAGCCCCGTTCCTGAACAGAATCGTTatat < 1:186710‑M1/113‑1 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTAt < 2:182292‑M1/113‑1 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGACTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCtac < 2:335502‑M1/113‑2 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCATTCTAtct < 2:111634‑M1/115‑1 (MQ=255) tGGCGACACGCTGTTACAGAAATATGTCGGGTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcgaccgattttgagtgcgacagcgacttccgtcccacc > 1:343397‑M1/1‑43 (MQ=255) gACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtg < 2:540597‑M1/149‑111 (MQ=255) acactaaatcagtaagtgggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCAt > 2:158229‑M1/31‑149 (MQ=255) taaatcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCg < 1:650047‑M1/123‑1 (MQ=255) tcagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGAcc < 2:75454‑M1/127‑1 (MQ=255) cagtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTTTCGGCTCATCGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCa > 2:564929‑M1/22‑149 (MQ=255) gtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACCGAATCGTTCTATCCCCATTCCGGACCAgg < 1:259740‑M1/130‑1 (MQ=255) gtaagttggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGAACTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTACTGCACAGCATCGGTCTAACTCCATTCCggacccgg < 1:345611‑M1/130‑4 (MQ=255) ccAGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc < 1:80077‑M1/149‑122 (MQ=255) aGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct > 2:205983‑M1/1‑26 (MQ=255) aGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct > 2:482268‑M1/1‑26 (MQ=255) aGAAACATGAAGGCTTTAAAGATGCTggtaatgactccaacctattgatagtgttttatgttcagataatgcccgatgactgtgtcatgcagctccaccgactttgagaacgacagcgacttccgtcccagccgcgccaggcgctgcct > 1:163722‑M1/1‑26 (MQ=255) aGAAACATGAAGGCTTTAAAGATGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcct > 1:681841‑M1/1‑26 (MQ=255) agttggcagcgtcactAACGTTGCTGACCACATCGCGTTGGGTACCACTTAGTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGAcc > 1:574650‑M1/17‑149 (MQ=255) aaaCGTGAAGGCTTTAACG‑TGGTgtgtaatggctccaacttgttgatagtgttttatgttcagataatgcccgctgactttgtcatccagctccgccgattttgagaacgtcagcgtcttccgtcccagccgtgccaggtgctgcctca < 1:453962‑M1/149‑127 (MQ=255) tgtcagaatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGCTGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGtt > 1:421526‑M1/14‑149 (MQ=255) tggcagcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGACTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGCCCAGGACCGtt < 2:523621‑M1/136‑1 (MQ=255) aCATGAAGGCTTTAAAGATGCTggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcctagccgtgccaggtgctgcctcaga < 2:577541‑M1/149‑128 (MQ=255) gAAGGCTTTAAAGATGCTggtaatgactccaactgattgatagtgttttatgttcagataatgcccgacgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca < 1:599712‑M1/149‑132 (MQ=255) gcatcaccAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTgg > 2:481905‑M1/9‑149 (MQ=255) aaGGCTTTAAAGATGCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgttccaggtgctgcctcagattcag > 2:490601‑M1/1‑17 (MQ=255) | AATGTGGGAAGTGTCAGGTTATAACCGTGTTGATCCACAGTGGGCGATTCACTATAGCCTGGCTTACACCAGCTGGAGTCAGTTCCAGCAGCTGAAAGCGACCTCAACCAGTGGCGACACGCTGTTCCAGAAACATGAAGGCTTTAAAGATGCTTACCGCATCGCGTTGGGTACCACTTATTACTACGATGATAACTGGACCTTCCGTACCGGTATCGCCTTTGATGACAGCCCAGTTCCTGCACAGAATCGTTCTATCTCCATTCCGGACCAGGACCGTTTCTGG > CP009273/2455678‑2455963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |