New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	= 2269346	2 (0.040)	53 (1.120)	46/296	0.1	96.4%	coding (595/1026 nt)	yejE	microcin C transporter YejABEF, permease subunit; ABC family
	?	CP009273	3576788 =	NA (NA)					intergenic (+10/‑55)	yrhA/insA	pseudogene, interrupted by IS1E/IS1 repressor TnpA

TGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2269200‑2269346 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT  >  CP009273/3576788‑3576932                                                                                                                                                                                                                                                                                                      TGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTACAGTCGATCTCTGGGGCCAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCAGTTTTTGATTATTTTACTTTCCAGCGTCGGG                                                                                                                                                 >  2:261533/1‑149        CTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGGTGCT                                                                                                                                          >  2:487827/1‑149         TGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTG                                                                                                                                         >  1:603035/1‑149          GTTCCGGCGTGATGGGGGTGCTGGGGTGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGTAGACCGCTTTATTGATGTATGTTCGGGGATGCGCACGCTGTTTTTGATTCTTTTACTTTCCAGCGTCGGGTGATGCTGC                                                                                                                                        <  1:375797/149‑1          GTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGC                                                                                                                                        >  2:127139/1‑149           TTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACACGGCTATTACGGCGGTAAAGTCGATCTCTGGGGCCAACGCTTTATTGACGTATGTCCGGGGATGCCGACGCTGTTTTTGATTCTTTTACTTTCCAGCGTCGGCTGAGGCTGCC                                                                                                                                       >  1:257875/1‑149                     ATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGA                                                                                                                             <  1:758903/149‑1                          CGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTGAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTCTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCGACTTACTGCTTTcg                                                                                                                        >  1:480067/1‑147                          CGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAG                                                                                                                        >  2:341385/1‑149                           GTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGT                                                                                                                       <  2:603035/149‑1                           GTGCGGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGT                                                                                                                       <  2:369064/149‑1                            TGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAGGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTG                                                                                                                      >  2:685165/1‑149                            TGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGACGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACATACTGATTAAGTG                                                                                                                      >  2:118682/1‑149                                GGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAAAGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTCCTTTCCAGCGTCTGGTGAGTGTGCCAACTTACTGATTTTGTTTATG                                                                                                                  >  1:163587/1‑149                                   GGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTAC                                                                                                                                <  1:570060/132‑1                                   GGGGGCGCTACAAGGCTAGTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTAC                                                                                                                                >  2:570060/1‑132                                      GGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTTGTGTATGATGGTG                                                                                                            >  1:664269/1‑149                                          CTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTT                                                                                                        <  1:341385/149‑1                                          CTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTACTGTATGATGGTGTTTT                                                                                                        >  1:576370/1‑149                                              agGGCTATTACGGGGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGAGGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                                                                    <  2:160931/147‑1                                              AAGTCTATTACGGCGGTAAAGTCGATCTCTGGGGACCACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAG                                                                                                    <  1:513068/149‑1                                                       ACGGCGGTAAAGTCGAGCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGCCGCCGTTTTTGATTCTTTTACTTTCCAGCGCCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAG                                                                                           <  2:30042/149‑1                                                        CGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT                                                                                          <  1:582197/149‑1                                                                  GTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGCCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTCTGATGGCGTTTTTGAGGTGCTCCCGTGGCTTCTGTT                                                                                >  1:129758/1‑149                                                                   TCGGTCTCTGGGGACAACGCTTTATGGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                                                                               <  2:192057/149‑1                                                                     gagCTCTGGGGACAACGCTTTCTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                                                                             <  1:521822/146‑1                                                                     GATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTAATGATTTAGTGTATGATGGTGATTTTGAGGTGCTCCAGTGGCTTCTGTTTCT                                                                             >  2:658348/1‑149                                                                         TCTGGGGACAACGCTTTATTGAAGTAGGGGCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCA                                                                         <  2:630149/149‑1                                                                             GGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTG                                                                     >  2:513694/1‑149                                                                                  AACGCTTTATTGATGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT                                                                <  2:612713/149‑1                                                                                  AACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCATCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCT                                                                >  2:527518/1‑149                                                                                   ACGCTTTATTGAAGTAGGGTCGGGGATGCCGACGATGATCTATATTTTTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTC                                                               <  2:526536/149‑1                                                                                              AAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTA                                                    >  1:643584/1‑149                                                                                              AAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTA                                                    >  2:665277/1‑149                                                                                              AAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCCCCTGTTCAGCTA                                                    >  2:185106/1‑149                                                                                                 tgTGGTCGGGTATGCCGACGCTGTTTTTGTGTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATCTAGTGTATGATGGGGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTG                                                 <  2:324782/147‑1                                                                                                    GGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGGTTCTATCAGCTGGCCCTCCTGTTCAGCTACTGACG                                              <  2:654113/149‑1                                                                                                          GGAAGCCGGCGCTGTTTTTGATTATTTTCCTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTcg                                        <  1:591029/149‑3                                                                                                                 GACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAA                                 >  2:431631/1‑149                                                                                                                   cggTGTTTTTGATTATTTTCCTTTCCCGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCGCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACG                               <  2:106081/146‑1                                                                                                                     CTGTTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGC                             <  1:423184/149‑1                                                                                                                        TTTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAA                          >  2:287316/1‑149                                                                                                                         TTTTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCACCTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAA                         <  2:307230/149‑1                                                                                                                           TTGATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGTTTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGAGACGTACCGGCAAAAGC                       >  2:29154/1‑149                                                                                                                             GATTTTTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCGTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCAC                     <  2:480067/149‑1                                                                                                                              ATTATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACC                    >  2:716865/1‑149                                                                                                                                TATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGAATCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGC                  >  2:414763/1‑149                                                                                                                                 ATTTTACTTTCCAGCGTCGGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCGAAAGCACCGCC                 >  2:768532/1‑149                                                                                                                                 ATTTTACTTTCCACCGTCGGGTGATGCTGCCAACTTACTGATTTCGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCC                 <  1:135303/149‑1                                                                                                                                  TTTTACTTTCCAGCGTCGGGTGATGATGCCCACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGTTTCGGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGTGGTGGTGCGTAACGGCAAAAGCACCGCCG                <  2:470512/149‑1                                                                                                                                        TTTCCAGCGTCGGGTGATTCTGCCAAATTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATC          >  2:571495/1‑149                                                                                                                                            CAGCGTCGGGTGATGCTGCCAACTTACTGATTTTGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCG      <  1:470523/149‑1                                                                                                                                                gcCGGGCGATGCCGCCAACTTACCGATTTAGTGTATGATGGGGTTTCTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT  <  2:296846/147‑1                                                                                                                                                                                                                                                                                                      TGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP009273/2269200‑2269346 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAGCACCGCCGGACATCAGCGCTAT  >  CP009273/3576788‑3576932

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.