New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 360104 =NA (NA)186 (1.550) 116/294 0.0 NA intergenic (‑38/+557) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor
?CP009273 = 360286 NA (NA)intergenic (‑220/+375) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor

Only 100 of 144 total aligned reads displayed.

CGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGA  >  CP009273/359956‑360251
                                                                                                                                                    |                                                                                                                                                   
 ggTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCaa                                                                                                                                                    >  1:1535514/1‑149 (MQ=255)
 ggTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCACCCAGTGCAGGAGCCCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCaa                                                                                                                                                    >  2:864326/1‑149 (MQ=255)
    aGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTc                                                                                                                                                 >  2:658694/1‑149 (MQ=255)
    aGTTCAGGCAGTTCAATCAACTGTTCACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTc                                                                                                                                                 <  1:681869/149‑1 (MQ=255)
      ttCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCCCCGATGATAAGCAGTCAAACATGAGAATTCCGCTCCCCAATTCCt                                                                                                                                               >  1:98844/1‑149 (MQ=255)
      ttCAGGCAGTTCAATCAACTGGTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCAGCCAGTGCAGCCGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCt                                                                                                                                               <  2:1020998/149‑1 (MQ=255)
       tCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGAGCCCCAATTCCTg                                                                                                                                              >  1:746218/1‑149 (MQ=255)
          ggCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCa                                                                                                                                           <  2:287296/149‑1 (MQ=255)
             aGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGtt                                                                                                                                        >  2:1584912/1‑149 (MQ=255)
               ttCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTa                                                                                                                                      >  2:1554557/1‑149 (MQ=255)
                 ccatcaaCTGCTTCCCTTGGGGAGCGACCTCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCAGCCAGCGCCACCATCCGGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATGCCGATCCCCAATTCCTGGCAGcttcgg                                                                                                                                    <  2:244846/147‑4 (MQ=255)
                 caatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATg                                                                                                                                    >  1:6523/1‑149 (MQ=255)
                  aatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAGTTCCGATCCCCAATTCCTGGCAGTTTATgg                                                                                                                                   >  1:310579/1‑149 (MQ=255)
                  aatcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGtaaaatc                                                                                                                                   >  2:1952797/1‑143 (MQ=255)
                   atcaaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATgga                                                                                                                                  >  2:1835172/1‑148 (MQ=255)
                     caaCTGTTTACCTTGTGGAGCGACAGCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTAcggcgg                                                                                                                                >  2:1306033/1‑149 (MQ=255)
                      aaCTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATGTGGCGCCACCATCCAGTGCGGTAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATggcggg                                                                                                                               >  1:466545/1‑149 (MQ=255)
                        cTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAATATATggcggacg                                                                                                                             >  1:687073/1‑149 (MQ=255)
                         tGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTTCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGt                                                                                                                            <  1:272712/149‑1 (MQ=255)
                          gtctACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCCGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTc                                                                                                                           <  1:1777677/146‑1 (MQ=255)
                          gTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTc                                                                                                                           >  1:1490289/1‑149 (MQ=255)
                                 ttGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCg                                                                                                                    >  1:490906/1‑149 (MQ=255)
                                 ttGTGGAGCGACATCCAGAGGCACCTCACCGTTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCg                                                                                                                    >  2:1362415/1‑149 (MQ=255)
                                     ggAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCAc                                                                                                                >  1:1489539/1‑149 (MQ=255)
                                          gACAGCCAGAGGCACTGTACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACCTGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTcc                                                                                                           <  2:104026/149‑1 (MQ=255)
                                           aCATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGACTTACGACAATCAATGCCGTGCAGTTTCTGTCTTGCGGCCTCCCCGCCACCCTCCg                                                                                                          >  1:450284/1‑149 (MQ=255)
                                           aCATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCCGGCGCCCGGCCCGCCACCCTCCg                                                                                                          >  1:1506825/1‑149 (MQ=255)
                                            cATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCgg                                                                                                         <  1:220913/149‑1 (MQ=255)
                                            cATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCgg                                                                                                         <  1:364375/149‑1 (MQ=255)
                                             aTCCCGCGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCggg                                                                                                        <  2:1133599/149‑1 (MQ=255)
                                             aTCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCggg                                                                                                        >  1:1622291/1‑149 (MQ=255)
                                             aTCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATAAAGGAAGTCGATTCCTGGAAGTTTATCGCGGTCGACCTGCCCGCCACCCTCCggg                                                                                                        >  1:1422701/1‑149 (MQ=255)
                                                cAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTGCCCCCCCCCCTCCGGGCCg                                                                                                     >  2:1944494/1‑149 (MQ=255)
                                                 aggggcgtttCACCGGTTGCCGGCGGCTTTCCGTCCGGCGCCCCCGCCCAGTGCAGGAGCTCCGATGATCAGTTGTCAAACACGGGTCTTCCGATCCCCCATTCCTGGCCGTCTTTGGCGGGCGGCCGGCCTGCCACCCCCCGGGCCGt                                                                                                    <  2:963899/141‑1 (MQ=255)
                                                       actcctctgCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTc                                                                                              <  2:546096/141‑1 (MQ=255)
                                                         ttCACCGCTTGCCAGCGGCTTACCGTCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGc                                                                                            >  1:1001072/1‑149 (MQ=255)
                                                         ttCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGc                                                                                            <  1:454239/149‑1 (MQ=255)
                                                           cACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCaa                                                                                          >  1:1240916/1‑149 (MQ=255)
                                                            cccGCCTGCCAGCGGCTTACCCTGCAGCGCCCCCAGCCCGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAAc                                                                                         <  1:1499512/148‑1 (MQ=37)
                                                             ccGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGcgaagcaacg                                                                                        <  1:1670916/149‑10 (MQ=255)
                                                                   gCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCaaa                                                                                  <  1:1499520/149‑1 (MQ=255)
                                                                      aGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATcc                                                                               >  1:783802/1‑149 (MQ=255)
                                                                                cATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCCAATCCGCTCCcggcg                                                                     >  1:538382/1‑149 (MQ=255)
                                                                                cATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcggcg                                                                     >  1:1595358/1‑149 (MQ=255)
                                                                                  cccgacgcCACCATCCAGCGGAATATCTCGGAGTGTAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGTGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGa                                                                   <  2:1864173/144‑1 (MQ=18)
                                                                                   ccAGCGCCACCATCCAGTGCAGGAGCTCCGATGCTAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAt                                                                  <  1:70288/149‑1 (MQ=255)
                                                                                     aGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGAttt                                                                >  1:249197/1‑149 (MQ=255)
                                                                                      gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGccgggagcggatttg                                                               <  1:86080/149‑15 (MQ=255)
                                                                                      gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTg                                                               >  1:695112/1‑149 (MQ=255)
                                                                                      gcgcCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGCCCGTT‑CTTCGCAACGTTTAAATCCGCTCCCGGCCGGttttt                                                              >  1:934410/1‑147 (MQ=25)
                                                                                        tccaccgTCCGGCGCAGGCGCTCCGCTGATAAGTTGTCAACAATGAAAGTCCGGGTACACAATGCCTGCCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTc                                                             <  2:1930482/148‑1 (MQ=14)
                                                                                         ccacccTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTcc                                                            <  2:1139542/149‑1 (MQ=255)
                                                                                           accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTa                                                          >  2:542277/1‑149 (MQ=255)
                                                                                           accaTCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATCCCGCTCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTa                                                          <  1:143421/149‑1 (MQ=255)
                                                                                           accaTCCAGTGCACGAGCTCCGATGATAAGCTGTCAAACATGATAATTCCCCTCCCCAATTCCTGGCAGTTTATGGCGGGCGGCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAACCCGCCCCCGGCGGATTTGTCCtt                                                          >  2:585498/1‑148 (MQ=21)
                                                                                               tCCAGTGCAGGAGCTCCGATGATAAGGTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCa                                                      <  2:423852/149‑1 (MQ=255)
                                                                                               tCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGACCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCa                                                      <  1:228597/149‑1 (MQ=255)
                                                                                                    tGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGgaga                                                 <  1:658234/149‑1 (MQ=255)
                                                                                                    tGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGgaga                                                 <  1:885947/149‑1 (MQ=255)
                                                                                                     gCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCATTCTCAGGagag                                                <  2:1489539/149‑1 (MQ=255)
                                                                                                      caggacgtctcatgatAGGCGGTCAAACTCGAGCATTCCGTCCCCCAACTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCGACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGc                                               <  2:365696/138‑1 (MQ=14)
                                                                                                      cAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGc                                               <  2:1291217/149‑1 (MQ=255)
                                                                                                      cAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGCCAGTTTATGGCGGGCGTCATGGAAGCCTTCCTCCGGGCCGATGCTTCGCAACGTTCCAATCCGCTCCCGGCGGATTTGTCCTACTCAGGCGAGc                                               >  1:467419/1‑149 (MQ=21)
                                                                                                           ccTCCGATGATAAGCTGTCAAACATGAGAATGCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCa                                          <  2:707564/148‑1 (MQ=255)
                                                                                                            ccccGATGATACGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAc                                         <  2:1786412/147‑1 (MQ=255)
                                                                                                            cTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCGGTTTATGGGGGGCGTCCTGCCGGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGCTTTGTCCTACCGGGGAGAGCggtgcc                                         >  1:768599/1‑144 (MQ=18)
                                                                                                            cTCCCATGTTCAGCTGGCAAACATGAGTACTCCGATCGCTAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAc                                         <  2:467419/149‑1 (MQ=14)
                                                                                                             tCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAcc                                        >  1:978566/1‑149 (MQ=255)
                                                                                                               cGATGATAAGCTGTCAAACATGAGAATGCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGa                                      <  2:1809529/149‑1 (MQ=255)
                                                                                                                gatgatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGac                                     <  1:1739721/149‑1 (MQ=255)
                                                                                                                 atgatAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCCAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCAACGaca                                    >  1:1883780/1‑149 (MQ=255)
                                                                                                                     tAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTGACCGgcaaaca                                >  1:1800246/1‑149 (MQ=255)
                                                                                                                      aaGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGacaaacaa                               >  1:519226/1‑149 (MQ=255)
                                                                                                                       aGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGGGGGCGTTCACCgcccatccac                              >  1:742833/1‑140 (MQ=17)
                                                                                                                        gCTGTCAATCATTACAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAacaaca                             <  1:1325060/149‑1 (MQ=255)
                                                                                                                        gCTGTCAAACTTGGGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGCCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAacaaca                             <  2:233820/149‑1 (MQ=255)
                                                                                                                          tGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTTCTACTCAGGATAGCGTTCACCGACAAACAACAGa                           <  1:1090577/149‑1 (MQ=255)
                                                                                                                           gTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGAt                          >  1:625422/1‑149 (MQ=255)
                                                                                                                               aaCGTGGGACTTCCGATCCTCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATaaaa                      <  2:538382/149‑1 (MQ=255)
                                                                                                                               aaCATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATaaaa                      <  1:124840/149‑1 (MQ=255)
                                                                                                                               aaCATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATaaaa                      >  1:593823/1‑149 (MQ=255)
                                                                                                                                  aTGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGa                   >  2:1153058/1‑149 (MQ=255)
                                                                                                                                       aaTTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGc              <  2:6523/149‑1 (MQ=255)
                                                                                                                                          tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCa           <  2:211873/149‑1 (MQ=40)
                                                                                                                                          tCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCa           >  2:1903879/1‑149 (MQ=40)
                                                                                                                                          ccggtgcctcAAGTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCa           <  2:1755761/140‑1 (MQ=9)
                                                                                                                                            cGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGCTTTGTCCTACTCAGGAGAGCGTTCACCGCCAAACAACAGGTAAAACGAAAGGCCCAgg         >  2:1478193/1‑148 (MQ=255)
                                                                                                                                            cGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACGGATAAAACGCAAGGCCCAGt         >  2:25785/1‑149 (MQ=255)
                                                                                                                                            cGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGt         >  2:314807/1‑149 (MQ=39)
                                                                                                                                            cGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCCCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACAAAAGGCCCAGt         >  1:1888293/1‑149 (MQ=255)
                                                                                                                                                tcccAATTCCCGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCttt     <  2:1952205/148‑1 (MQ=25)
                                                                                                                                                ccccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCttt     <  1:1118954/149‑1 (MQ=35)
                                                                                                                                                 cccATTTCCTGGCAGTTCATGGCGGGCGCCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTc    <  2:1422701/149‑1 (MQ=12)
                                                                                                                                                  tcAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTc                                                                                              <  1:556873/57‑1 (MQ=255)
                                                                                                                                                  ccACTTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCg   <  2:225763/149‑1 (MQ=17)
                                                                                                                                                  ccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCaaa                                                                                  <  2:362109/70‑1 (MQ=40)
                                                                                                                                                  ccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCaaa                                                                                  >  1:362109/1‑70 (MQ=40)
                                                                                                                                                  ccAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCcg                                                                        >  1:1740477/1‑80 (MQ=39)
                                                                                                                                                   cAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGGTTGGGAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACGCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCCTTCGa  >  2:302419/1‑149 (MQ=11)
                                                                                                                                                   cAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGa  >  2:372820/1‑149 (MQ=33)
                                                                                                                                                    |                                                                                                                                                   
CGGTAGTTCAGGCAGTTCAATCAACTGTTTACCTTGTGGAGCGACATCCAGAGGCACTTCACCGCTTGCCAGCGGCTTACCATCCAGCGCCACCATCCAGTGCAGGAGCTCCGATGATAAGCTGTCAAACATGAGAATTCCGATCCCCAATTCCTGGCAGTTTATGGCGGGCGTCCTGCCCGCCACCCTCCGGGCCGTTGCTTCGCAACGTTCAAATCCGCTCCCGGCGGATTTGTCCTACTCAGGAGAGCGTTCACCGACAAACAACAGATAAAACGAAAGGCCCAGTCTTTCGA  >  CP009273/359956‑360251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.