| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 498909 | 101 (0.840) | 6 (0.050) | 6/272 | 16.0 | 6.0% | intergenic (‑215/+23) | ybaL/fsr | inner membrane putative NAD(P)‑binding transporter/putative fosmidomycin efflux system protein |
| ? | CP009273 | = 498914 | 93 (0.840) | intergenic (‑220/+18) | ybaL/fsr | inner membrane putative NAD(P)‑binding transporter/putative fosmidomycin efflux system protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAGGTAATAGTTTATGACAATTTCATTGATGATGTTCATGAATAATTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/498751‑498909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagccaaagGCAAACTTTGGCTGCATCGTTTTACAGTCACCATAAGCCTTTCCTCTGTTAAACCGCCTTCTGTTTTCCGATCCGTGCTTTTTTTGCAGCTAATTCCATTTTTCTGCAAAATTCAATAATTATTCATGAACATCATCAATGAAATTGT < CP009273/498914‑498767 CAGGTAATAGTTTATGACAATTTCATTGATGATGTTCATGAATAATTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGAT < 1:1919833/149‑1CAGGTAAGAGTGTATGACAATTTCATTGATGATGTTCATGAATAATTATTGAACTGTGCAGAAAAATGGAATTAGCTGCAAACAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGATGAAAGGCTTATGGTGACTGTAAAACGAT < 1:1108795/149‑1 GTTTATGACAATTTCATTGATGATGTTCATGAATAATTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAA > 1:1958474/1‑149 GACAATTTCATTGATGATGTTCATGAATAATTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGGCAAA > 2:903182/1‑149 TCATTGATGATGTTCATGAATAATTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGGCAAACTTTGGC < 1:1766465/149‑1 CATTGATGATGTTCATGAATAATTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGGCAAACTTTGGCT < 2:276382/149‑1 GATGATGTTCATGAATAATTATTGAAGTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGGCAAACTTTGGCTGCAT < 1:1815788/149‑1 TTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGGCAAACTTTGGCTGCATCGTTTTACAGTCACCATAAGCCTTTC < 1:1135084/149‑1 AGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAGGCAAACTTTGGCTGCATCGTTTTACAGTCACCATAAGCCTTTCCTCTGT < 1:903182/149‑1 GCAGCCAAAGGCAAACTTTGGCTGCATCGTTTTACAGTCACCATAAGCCTTTCCTCTGTTAAACCGCCTTCTGTTTTCCGATCCGTGCTTTTTTTGCAGCTAATTCCATTTTTCTGCAAAATTCAATAATTATTCATGAACATCATCAA < 1:337490/149‑1 CAGCCAAAGGCAAACTTTGGCTGCATCGTTTTACAGTCACCATAAGCCTTTCCTCTGTTAAACCGCCTTCTGTTTTCCGATCCGTGCTTTTTTTGCAGCTAATTCCATTTTTCTGCACAATTCAATAATTATTCATGAACATCATCAAT > 1:1861649/1‑149 CAGCCAAAGGCAAACTTTGGCTGCATCGTTTTACAGTCACCATAAGCCTTTCCTCTGTTAAACCGCCTTCTGTTTTCCGATCCGTGCTTTTTTTGCAGCTAATTCCATTTTTCTGCAAAATTCAATAATTATTCATGAACATCATCAAT > 2:934435/1‑149 GGCAAACTTTGGCTGCATCGTTTTACAGTCACCATAAGCCTTTCCTCTGTTAAACCGCCTTCTGTTTTCCGATCCGTGCTTTTTTTGCAGCTAATTCCATTTTTCTGCAAAATTCAATAATTATTCATGAACATCATCAATGAAATTGT < 2:1883020/149‑1 CAGGTAATAGTTTATGACAATTTCATTGATGATGTTCATGAATAATTATTGAATTTTGCAGAAAAATGGAATTAGCTGCAAAAAAAGCACGGATCGGAAAACAGAAGGCGGTTTAACAGAGGAAAGGCTTATGGTGACTGTAAAACGATGCAGCCAAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP009273/498751‑498909‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagccaaagGCAAACTTTGGCTGCATCGTTTTACAGTCACCATAAGCCTTTCCTCTGTTAAACCGCCTTCTGTTTTCCGATCCGTGCTTTTTTTGCAGCTAATTCCATTTTTCTGCAAAATTCAATAATTATTCATGAACATCATCAATGAAATTGT < CP009273/498914‑498767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |