| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2269346 | 0 (0.000) | 43 (0.990) | 39/292 | 0.2 | 100% | coding (595/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 3576788 = | NA (NA) | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA | |||||
CTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAG > CP009273/2269199‑2269482 | cTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGGCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGg > 2:704784‑M1/1‑148 (MQ=255) aacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcataatctgaacataaaacactatcaaaaaggtggaggcattaccCCAGcgtcg < 1:613695‑M1/9‑1 (MQ=255) tctctGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGg > 1:119203‑M1/1‑143 (MQ=255) cctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattatcCCAGCGTCGTACAGcc < 2:418915‑M1/16‑1 (MQ=255) tctGTTCCAGCGTGATGGGCGTGTTGGCAGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGGCGggtgatgc > 2:485734‑M1/1‑141 (MQ=255) tctGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGTTCTCTGGGGGCAACGCTTTATTGAAGTATGGTCGGGGATGCCGGCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggg > 1:220934‑M1/1‑141 (MQ=255) tctGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTGTTGAATTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgc > 2:542391‑M1/1‑141 (MQ=255) ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCt < 2:130828‑M1/17‑1 (MQ=255) aatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGc < 1:183555‑M1/15‑1 (MQ=255) aatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacacgatgaataagttggagtcattacaCCAGCGTCGTACAGc < 1:60875‑M1/15‑1 (MQ=255) aatcggaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGc > 1:89344‑M1/130‑144 (MQ=255) ttCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatg > 1:423521‑M1/1‑137 (MQ=255) tctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcgggggagctgcatggcaaagtcatcgggcattatctgaacataaaccactatcaataagttggcgtcattaccCCAGCGTCGCACAGGCTAGCtt < 2:42355‑M1/22‑1 (MQ=255) aGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTCAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgc < 1:353700‑M1/144‑12 (MQ=255) gTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaa < 1:349694‑M1/144‑15 (MQ=255) cctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggtgg > 1:683006‑M1/116‑144 (MQ=255) gcgggtcggcgggggcGTCACCAGGCTCTTCTGCCGGTAAAGCCTATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCTTCGggtgatgctgccaacttactgattta < 2:522698‑M1/142‑27 (MQ=255) gCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaccttactg > 1:299448‑M1/1‑123 (MQ=255) gCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgattta < 2:123748‑M1/149‑27 (MQ=255) gTGCTGCCGGGGGCGNTACAAGGNTNTTACGGGGGTAAAGCCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGTGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagt < 2:562881‑M1/149‑29 (MQ=255) gcacgggtgggacggaatgcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgtacataaaacactatcaagcagttggagtccttaccCCAGCGTCGTACAGCCTAACTTCTGGTGgctgc > 1:99364‑M1/112‑144 (MQ=255) gcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCa > 2:30540‑M1/112‑149 (MQ=255) acggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGcaag < 2:573997‑M1/40‑2 (MQ=255) gggCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggt < 2:632696‑M1/149‑39 (MQ=255) ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTa > 1:512865‑M1/103‑144 (MQ=255) acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggtattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGACtt < 2:50772‑M1/49‑1 (MQ=255) ggctACAAGGCTATTGCGGCGGTAAAGTCGATCTTTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatg < 1:34470‑M1/143‑37 (MQ=255) tACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggggatgctgccaacttactgatttagtgtctgatggtgttttt > 2:483604‑M1/1‑105 (MQ=255) aGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTAGGGGGTGCCGGCGCTGTTGTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttt > 1:545138‑M1/1‑101 (MQ=255) ggCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgttttt < 1:648450‑M1/144‑45 (MQ=255) gCTATTACGGCGGTAAAGTCGATCGCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg < 1:656140‑M1/144‑46 (MQ=255) tATTACGGCGGTAAAGTCGCTCGTCGGGGACAACGCGTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag < 1:251376‑M1/144‑48 (MQ=255) gtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGAt > 2:258779‑M1/89‑149 (MQ=255) tcgttcccaaaactggtggagcttcatgacaaaggcatcgggcattatctgaacataaaacactatcaataagttggactcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCt > 1:320508‑M1/88‑144 (MQ=255) cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 2:299680‑M1/87‑149 (MQ=255) ggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc > 1:661770‑M1/1‑91 (MQ=255) tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttgtagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 1:213885‑M1/82‑144 (MQ=255) ggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct > 2:536015‑M1/1‑88 (MQ=255) gTAAATGCGATCTCTGGGGACGACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgcccacttactgatttagtggatgatggtgtttttgaggtgctccagt < 1:337249‑M1/144‑58 (MQ=255) tgggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCg > 1:377405‑M1/73‑144 (MQ=255) ggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGCTAGTTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCgtggt > 2:659437‑M1/71‑149 (MQ=255) gATCTCTGGGGACAACGCCTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTCCTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttcaggtgctccagtggcttctgtttct < 2:371929‑M1/149‑71 (MQ=255) aTCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATCCCGACGTTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt < 1:333525‑M1/144‑67 (MQ=255) aTCTCTGGGGACAACGCCTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttcctgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgt > 1:333243‑M1/1‑78 (MQ=255) gcatgacaaagtcatcgggcattatctgaacatacgcttctgtcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCgtggtg < 1:309321‑M1/80‑1 (MQ=255) gacaaagtcatcgggcattatctgaacataaaacactatcagtaagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTgcggg > 1:41399‑M1/61‑144 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTgcgggcgg < 1:424301‑M1/87‑1 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGGCTGGTCAGCGTGGTgcgggcgg < 1:557198‑M1/87‑1 (MQ=255) aaCGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgattgtgtttttgaggtgctccagtggcttctgtttctatcagctg > 1:573841‑M1/1‑66 (MQ=255) aaCGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTGTGATTATTTTACTTTCCAGCGTCGggtgatgcggccaacttactgattaagcgtctgatggtgtttttgaggtgctccagcggcttctctttctatcacctg > 1:392964‑M1/1‑66 (MQ=255) cctTTATTGAAGTATGGCCGGGGATGCCGACGCTGTTTTTGATTCTTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct < 2:58758‑M1/148‑87 (MQ=255) tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGtt < 1:436031‑M1/91‑1 (MQ=255) tcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTAc > 2:664245‑M1/54‑149 (MQ=255) tcatcgggcattatctgaacataaaacactatcaataaggtggagtcatcaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTAc > 2:7400‑M1/54‑149 (MQ=255) cTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg < 2:490069‑M1/149‑88 (MQ=255) tatgggagtatggTGGGGGATGCCTACCCTGTTTTTGATTATTTTACTTTCCAGCGTCGggggatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc < 2:135725‑M1/143‑91 (MQ=255) tATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc > 2:670909‑M1/1‑59 (MQ=255) gggcattatctgaacataaaacactatcactaagttggagtcattaccCAAGCGTCGTACAGCGTAACTTCTGGTGGCTGGGGGCAATTACTGTCTTGTCTCGCTGGATGATTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTAc > 1:280751‑M1/49‑144 (MQ=255) gggcattatctgaacataaaacactatcaagaagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTAc > 1:353626‑M1/49‑144 (MQ=255) gAAGTATGGTCGGGGACGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctcccaacttactgatttagtctatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt < 1:50597‑M1/144‑90 (MQ=255) aaGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta < 2:424718‑M1/149‑96 (MQ=255) gTATGGTCCGGGATGCCGACCGTGTTTGTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcag < 1:526108‑M1/144‑93 (MQ=255) ggTCGGGGATGCCGACGCTGTTTTTCATTAGTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctactgttcagctactgacg > 2:384303‑M1/1‑48 (MQ=255) tgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGGGTTTTTACGTACTCGtat < 1:286476‑M1/106‑2 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgg < 2:262980‑M1/149‑103 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatatagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact > 1:84719‑M1/1‑47 (MQ=255) gcgGGGACGCCGACGCCGTTTTTGATTATGTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggg < 2:585645‑M1/148‑104 (MQ=255) aacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGAc > 2:72659‑M1/37‑149 (MQ=255) ggggATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggt > 2:679706‑M1/1‑44 (MQ=255) actatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGGTTTTACGTAATCGTAATTTCGACtacca < 1:154763‑M1/118‑3 (MQ=255) atgctGTTCTTAATTACTTTACTTTCCAGCGCCGggtgatgctgccaacttactgatttagtgtattatggtgtttttgaggtgctccagtggcttctgttcctatcagctgtccctcctgttcagctaccgacggggtggtgc < 1:127295‑M1/142‑111 (MQ=255) ttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTGATTTCGACTACATTCGTGCGGCACAGgcgc < 2:378606‑M1/135‑1 (MQ=255) tgggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGcaca > 1:276700‑M1/15‑144 (MQ=255) tattTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgc > 2:450823‑M1/1‑20 (MQ=255) gtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGAGTACATTCGTGCGGCACAGGCGCTTGGc < 2:518288‑M1/140‑1 (MQ=255) attaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTc < 2:563293‑M1/143‑1 (MQ=255) attaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTc < 2:39814‑M1/143‑1 (MQ=255) taccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAg > 2:26439‑M1/5‑149 (MQ=255) ttCCATCGGCGggtgatgttgccaacttactgatttagtgtatgatggtgtttgtgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaggcaccgccgga < 1:288773‑M1/144‑134 (MQ=255) cAGCGTCGgtggatgctgccaacttactgatttagtgtatgagggtgtttttgaggggctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacat < 1:497586‑M1/144‑137 (MQ=255) | CTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAG > CP009273/2269199‑2269482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |