| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3979974 | 56 (1.040) | 5 (0.100) | 5/268 | 6.6 | 8.9% | intergenic (‑607/+72) | aslA/hemY | putative Ser‑type periplasmic non‑aryl sulfatase/putative protoheme IX synthesis protein |
| ? | CP009273 | = 3979982 | 51 (1.020) | intergenic (‑615/+64) | aslA/hemY | putative Ser‑type periplasmic non‑aryl sulfatase/putative protoheme IX synthesis protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGT > CP009273/3979836‑3980124 | aaCTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAaga > 1:792102/1‑149 (MQ=255) cGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAgg < 1:647902/149‑1 (MQ=255) ggAAGGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGCTGGGTTAAGCACACCAGGCCTACCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGc < 1:445287/149‑1 (MQ=255) aaTGACGCAGAGCCGTTTACGGTGCCTATCGGCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGc < 2:147011/143‑1 (MQ=255) cAGAGCCGGTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTa < 1:596096/149‑1 (MQ=255) gCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGATCCGTAATAAGAGCAGGCGTTTTTTTATGTa > 1:615468/1‑149 (MQ=255) cGTTTACGGTGCCTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATc < 1:773096/149‑1 (MQ=255) aCGGTGCTTATCGCCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGaa < 1:322495/149‑1 (MQ=255) aCTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGAGCtt > 1:338133/1‑149 (MQ=255) tGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGc < 1:576998/149‑1 (MQ=255) tGACAGAAGTCGCTTATGCCGCATCAGACACCATGGACACAACGTTGAGGGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGc < 1:883838/149‑1 (MQ=255) aGATGTCGCTTATGCCTCATCAGACACCCTGGACACAACGTTGAGTGAAGCACCCACGTGTTGTCATACAGACCTGTTTTAACGCCTGCCCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGCAGGCCCCGGAGGTGCtt < 2:98625/143‑1 (MQ=255) gATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTACCAGGAAGGCCCCGGAGGTCCTTg > 2:445150/1‑143 (MQ=255) aTGTCGCTTATGCCCCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTACGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCgg < 1:407321/149‑1 (MQ=255) tCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATCCAGACCTGTTTTAACGCCTGCTCCGTCATAAGCGCAGGCGTTTTTTTATGTATCAAGAAGGCCCCGGAGGTGCTTGCCTCCGGGTg > 1:141967/1‑149 (MQ=255) gCTTATGCCTCATAACACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTgag < 1:497491/149‑1 (MQ=255) cTTATGCCTCATCAGACACCAGGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCgg < 2:443684/143‑1 (MQ=255) ttATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTACTTGCATCCGGATGAGaa > 1:378286/1‑149 (MQ=255) aTGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAgg < 1:301311/149‑1 (MQ=255) aTGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTATTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGCCCCCGAAGGGGCCTGGCTCCGGGTg > 2:395324/1‑143 (MQ=255) gCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTCTCAGGAAGGCCCCGGAGGGGCTTGCCTCCGGGTGAGAAGGaa > 1:755690/1‑149 (MQ=255) gCCTCAACAGACACCATGGACACTACGTGGTGGGAAGGCCCATCTTGTTGTCATACAGGACTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTCTTTATGTTTCAGGAAGGCGCCGGAGGTGCTTGCCTCCGGGTgag < 2:326972/143‑1 (MQ=255) cgcatcaGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGaa < 2:88326/141‑1 (MQ=255) tcatcaGACACCATGGACACAACGTTGAGTGAAGCCCCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAacta < 1:467651/149‑1 (MQ=255) tcatcaGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAacta < 1:752153/149‑1 (MQ=255) tcaGACACGATGGACACAACGGTGAATGAAGCACCCACTTGTTGTCATACCGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTGTTTTTATGTATCAGGAAGGCCCCGGACGCGTTTGCCTCCGGGTGAGAAGaaa > 2:584199/1‑143 (MQ=255) aGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACtgtg > 1:390787/1‑149 (MQ=255) gACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAacta < 2:724290/143‑1 (MQ=255) ggACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGTCCTGTTTTAACGGCTGCTTCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCg < 2:18196/143‑1 (MQ=255) ggACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCg > 2:504397/1‑143 (MQ=255) ttGAGTGAAGCACCCCCTTGTTGTCATACAGACCTGTTTTAACGCCTGCGACGTAATAAGAGCAGGCGTTCTATTATGTGTCAGCAAGGCCCCGGAGGTGCTTGCCGCCGGGTGAGAAGGAACTCCTGTGGCGGGttggtctc > 2:58029/1‑137 (MQ=255) attgaactatccccTTGTTGTCATACAGACCTGTTTTCACGCCTGCCCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTCCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCaa < 2:737912/130‑1 (MQ=255) aGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCaa < 2:129034/143‑1 (MQ=255) gAAGCACTCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCGCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACAt < 1:396527/149‑1 (MQ=255) gCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATATGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCGACGTTAACATCaa > 1:655910/1‑149 (MQ=255) cACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTACCATCaaa > 1:96050/1‑149 (MQ=255) aCCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAAc < 1:406758/149‑1 (MQ=255) acgtgttgtCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCaa < 2:289992/140‑1 (MQ=255) aCTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCaa < 2:434810/143‑1 (MQ=255) cTTGTTGTCATACAGACCTGTTTTAACGCCTGATCCATAAAAATTGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGGTATTCTGCAACGTTAACAGCAAACAGTcg > 1:221100/1‑149 (MQ=255) cATACAGACCTGTTTTCACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCAt < 1:698501/149‑1 (MQ=255) tACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGAc > 2:272814/1‑143 (MQ=255) aCCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGTGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCa > 1:854312/1‑149 (MQ=255) aCCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCa < 1:173131/149‑1 (MQ=255) aCCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCa > 1:680165/1‑149 (MQ=255) cTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGc > 1:765473/1‑149 (MQ=255) ttttttACCGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCt < 2:352388/141‑1 (MQ=255) ttttAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCtca > 2:146559/1‑141 (MQ=255) ttttAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGcttc > 1:312233/1‑149 (MQ=255) cGCCTGCTCCTTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGCAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGcttc < 2:556763/143‑1 (MQ=255) cTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCgg < 2:533658/143‑1 (MQ=255) tCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGc > 2:749042/1‑143 (MQ=255) tCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGc > 1:564248/1‑149 (MQ=255) cccGTAACAAGTGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGc < 1:241988/148‑1 (MQ=255) agacCAGGTGGTTTTCTATGTATCAGCAAGCCCCCGGTGGTGCGTGCCTCCGGGTGATACGTAACTCCTGTGGCGGTTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGt < 2:651987/143‑1 (MQ=255) | AACTCCGGAATGACGCAGAGCCGTTTACGGTGCTTATCGTCCACTGACAGATGTCGCTTATGCCTCATCAGACACCATGGACACAACGTTGAGTGAAGCACCCACTTGTTGTCATACAGACCTGTTTTAACGCCTGCTCCGTAATAAGAGCAGGCGTTTTTTTATGTATCAGGAAGGCCCCGGAGGTGCTTGCCTCCGGGTGAGAAGGAACTACTGTGGCGGGTTATTCTGCAACGTTAACATCAAACCGTCGCGACGCATAGCTGCAGCTTCTTCCGGCTTGTGCAGT > CP009273/3979836‑3980124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |