| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,067,611 | G→T | 5.7% | P2Q (CCA→CAA) | rutC ← | putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,067,611 | 0 | G | T | 5.7% | 214.0 / 3.0 | 71 | P2Q (CCA→CAA) | rutC | putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity |
| Reads supporting (aligned to +/- strand): ref base G (40/26); new base T (2/2); total (43/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.95e-01 | |||||||||||
GCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGT > CP009273/1067467‑1067758 | gcCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCGGCGGGAATAATTACGGGTTTTGGCAt > 1:1129215/1‑149 (MQ=255)gcCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCAt < 1:1073115/149‑1 (MQ=255)gcCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCAt < 1:1016310/149‑1 (MQ=255) ccTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGCTTTTGGCATc > 1:177656/1‑149 (MQ=255) cTTTGGGTCATCGGCAAACAGCACGTTATGATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGTCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCACCg > 1:28879/1‑149 (MQ=255) ttgggcactCGGCCAACAGCACGTTATTATGTTGAGCAAAAGCCAGCGTACCGGAGACAGACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGCGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGtt < 1:741723/141‑1 (MQ=255) ttGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGc < 2:20144/143‑1 (MQ=255) ttGGGTCATCGGCAAACAGCACGTTATTATATTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGc < 2:324553/143‑1 (MQ=255) ggTCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGACAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTaaa < 1:96451/149‑1 (MQ=255) tCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCAGCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACt > 1:891176/1‑149 (MQ=255) tCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCt > 1:251543/1‑149 (MQ=255) cGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACCGATTTTGGCCTCGTTAAACTCCtt > 1:31811/1‑149 (MQ=255) aaaCAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGGACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAGTTACGGATTTTGGCATCGTTAAACTcc > 2:27727/1‑143 (MQ=255) aaaCAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGACTTTGGCATCGTTAAACTcc > 2:283999/1‑143 (MQ=255) cAGCACGTTATTATGTTGATCAAAAGCCAGCGGACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCCGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGat < 1:1251247/149‑1 (MQ=255) cACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAAGTACGGGTTTTGGCATCGTTCAACTCCTTAAGCGagttg > 1:735378/1‑145 (MQ=255) ttattaTGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGaaa > 2:288083/1‑141 (MQ=255) ttatGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGGATAATTACGGATTTGGGCATCGTTAAACTCCTTAAGCGATATGa > 2:38694/1‑143 (MQ=255) tGTTGATCAAAAGCCAGCGTACCGGAGAAATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTCGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGAc > 1:849676/1‑149 (MQ=255) aTCAAAAGCCAGCGTACCGGAGACATAAAACAAGAGGTCATCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGa > 2:516362/1‑143 (MQ=255) aaaGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCACCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGaa < 1:786206/149‑1 (MQ=255) cAGCGTACCGGAGACATACACCCCGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAgcgc < 1:1019462/149‑1 (MQ=255) gCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGCCATCGTTAAACTCCTTAAGCGATATTATCAAAGGACGTTGGAGaaa < 2:102539/143‑1 (MQ=255) gTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGCGGTGAGCGTCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCg < 1:1275862/149‑1 (MQ=255) tACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAgcg < 2:364219/143‑1 (MQ=255) aCCGGAGACAAACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAgcgc < 2:779103/143‑1 (MQ=255) aTACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTc > 1:759396/1‑149 (MQ=255) aTACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACGCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCCCGTCGCAG‑‑aa > 2:376739/1‑143 (MQ=255) tACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGGTATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AAt > 2:912367/1‑143 (MQ=255) tACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCCG‑‑AATGTTTCg > 1:140109/1‑149 (MQ=255) tACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGAGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCg > 1:870498/1‑149 (MQ=255) cacGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGGCGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGCCGTc > 1:1029190/1‑149 (MQ=255) gCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAAGAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCt < 1:467791/149‑1 (MQ=255) ccagcGTGCCGGGAGCGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGc < 1:8585/149‑1 (MQ=255) ccagcGTGCCGGGAATGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGa > 2:1128690/1‑143 (MQ=255) ccagcGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGCATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGGAAGCGCGTCGGAA‑‑AATGTTTCGACGTCGCTTACCCAGc > 1:425279/1‑149 (MQ=255) tGCCGGGAACGAGGGGGGTCAGCGGTGCGCTGCTGCCAGCGGGAATAATTATGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCACAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCaac < 2:1058038/143‑3 (MQ=255) cGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCaa > 2:1105531/1‑143 (MQ=255) ggAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTGAACTCCTTAAGCGGTATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGtt > 1:1025444/1‑149 (MQ=255) ggAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGtt > 1:1025729/1‑149 (MQ=255) gAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAGTTATTGTTT‑G‑CGTCGCTGACCCAGCCAAAAAAGGttt < 1:1287222/149‑1 (MQ=255) aCGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATACTTACGGATTTTTGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGTGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAg > 2:686292/1‑143 (MQ=255) aCGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTTGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAg > 2:127231/1‑143 (MQ=255) cGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGa < 1:41791/149‑1 (MQ=255) gAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGat > 1:39319/1‑149 (MQ=255) gAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAA‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGt > 2:421880/1‑143 (MQ=255) aaGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGtt > 2:1010448/1‑143 (MQ=255) aaGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGtt > 2:918365/1‑143 (MQ=255) aaGGGGGCAAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCATTGAGCGATATGAGCAAAGGACGTGGGGGAAAGCGCGTGGCAG‑‑AATGGTTCGACATCGCTGACCCAGCCAAAAAAgggt > 2:1070839/1‑141 (MQ=255) ggggCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTGGGCATCGTTAAACTACTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTg < 1:533580/149‑1 (MQ=255) gCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGata > 2:475257/1‑143 (MQ=255) cAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGCCGTCGCTGACCCAGCCAAAAAAGGTTTCGATAtt > 2:179260/1‑143 (MQ=255) cAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATGtt > 2:218668/1‑143 (MQ=255) cAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATAtt > 2:912457/1‑143 (MQ=255) gCGGGGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACCTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCACTGCCCCAGCCAAAAAAGGTTTCGATATTGAACAAcg < 1:701569/149‑1 (MQ=255) cgcTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGGTAAACTCCGTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCAAACACAAAAAAAAAAGGTTTCGATATTGAACAAcg < 2:901989/143‑1 (MQ=255) gctgctGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAGGGTTTCGATATTGCACAACGCGGCttt > 1:568910/1‑149 (MQ=255) tgcCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTGCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTgcg < 1:155285/149‑1 (MQ=255) tgcCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTgcg < 1:850503/149‑1 (MQ=255) ccAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTc > 2:1085669/1‑143 (MQ=255) ccAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCa > 1:604052/1‑149 (MQ=255) ggAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTc < 1:216774/149‑1 (MQ=255) ggAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGGTTCGATATGGAACAACGCGGCTTTCTGCGCAAGTTTc > 1:435952/1‑149 (MQ=255) gAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCaa > 2:87617/1‑143 (MQ=255) gAATAATTACGGATTTTGGCATCGTTAAACTCCATAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCC‑AAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCaaa > 2:922946/1‑143 (MQ=255) aataatTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCgg > 1:537890/1‑149 (MQ=255) aataatTACGGATTGTTGCATCGTTCAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTCCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTCAACAACGCGGCTTTCTGCGCAAATTTCgg < 1:793904/149‑1 (MQ=255) aagaatTACGGATTTTTGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCgg < 1:147212/146‑1 (MQ=255) tGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGCGAGAAAGCGCGTCGTAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTg > 2:802067/1‑143 (MQ=255) tGGCATCGTTAAACCCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGt < 1:291595/149‑1 (MQ=255) tGGCATCGTGAAACTCCTCAGGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGTCTg < 2:775547/143‑1 (MQ=255) | GCCTTTGGGTCATCGGCAAACAGCACGTTATTATGTTGATCAAAAGCCAGCGTACCGGAGACATACACCACGCCATCAGCCAGCGTGCCGGGAACGAAGGGGGCCAGCGGTGCGCTGCTGCCAGCGGGAATAATTACGGATTTTGGCATCGTTAAACTCCTTAAGCGATATGAGCAAAGGACGTGGGAGAAAGCGCGTCGCAG‑‑AATGTTTCGACGTCGCTGACCCAGCCAAAAAAGGTTTCGATATTGAACAACGCGGCTTTCTGCGCAAATTTCGGCCCCGCCTGGTGAGT > CP009273/1067467‑1067758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |