BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	345316 =	NA (NA)	4 (0.060)	3/256	NT	NA	noncoding (1/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
*	?	CP009273	345348 =	NA (NA)	4 (0.060)	3/256	NT	NA	noncoding (33/365 nt)	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences	REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 131 total aligned reads displayed.

GCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA  >  CP009273/345201‑345493

           gtcaccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtatgcctgatgcgtcgctgacgcgacttatcaggcCTACGAGGTGCa                                                                                                                                        <  1:191139‑M2/12‑1 (MQ=255)

             caccccgtaggcctgataagtcacgtcagcggcgcatcaggcatcggttgtcggatgcgacgccatccgtcttatccgacctacagttcagtgcacctcgtaggcctgatgcgtcgctgacgcgacttatcaggcCTACGAGGTGCACt                                                                                                                                      <  1:250327‑M2/14‑1 (MQ=255)

             cGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTg                                                                                                                                     >  1:725801/1‑149 (MQ=255)

              gAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACGTGTGAGCCCGTAGCCCGGTCAGTTAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGTCCTACGAGGTGCACTGa                                                                                                                                    >  1:309190/1‑149 (MQ=37)

              gAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                                                                    >  1:1119654/1‑149 (MQ=255)

              gAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                                                                    >  1:1150801/1‑149 (MQ=255)

              gAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGAAACTTATGAGGCCTACGAGGTg                                                                                                                                          <  2:412248/143‑1 (MQ=255)

                aaGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGAGCACTGAAc                                                                                                                                  >  1:424467/1‑149 (MQ=255)

                 aGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACt                                                                                                                                 >  1:98004/1‑149 (MQ=255)

                  gCATCAACTACTACCAGTACGACGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCTGATGCCT‑ATGCGTCGCCGACGCGACTTATCAGGCCTACGAGGAGCACTg                                                                                                                                     >  2:654867/1‑143 (MQ=255)

                  gCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTg                                                                                                                                >  1:1114845/1‑149 (MQ=255)

                   cATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                                                               >  1:76484/1‑149 (MQ=255)

                    aTCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTCCGAGGTGCACTGAACTGTa                                                                                                                              >  1:336203/1‑149 (MQ=255)

                     tCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                                                                             >  1:423268/1‑149 (MQ=255)

                     tCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGaa                                                                                                                                   >  2:961547/1‑143 (MQ=255)

                      cAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTGCGGGGTGCACTGAAc                                                                                                                                  >  2:1035820/1‑143 (MQ=255)

                      cAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTGGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAgg                                                                                                                            >  1:84095/1‑149 (MQ=255)

                        actactACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAGAAAACGACCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGGCGCTGACGCGACTTATAAGGCCTACGAGGTGCACTGAACTGTAGGTc                                                                                                                          >  1:575973/1‑149 (MQ=255)

                         ctactaCCATTTCATAGAGAACTCCGACACCCTGCTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                                                                         <  1:713914/149‑1 (MQ=25)

                          tgataggtctcgtcggcggcgcatcaggcatcggttgtcggatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtagGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGt                                                                                                                               >  2:208996‑M1/91‑143 (MQ=255)

                           actacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGa                                                                                                                       <  1:136391/149‑1 (MQ=255)

                             tacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGCGGTGCACTGGACTGTAGGt                                                                                                                           >  2:593004/1‑143 (MQ=255)

                             tacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATa                                                                                                                     >  1:909602/1‑149 (MQ=255)

                             tacCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACGGTAGGt                                                                                                                           >  2:107087/1‑143 (MQ=255)

                              gccAGTACGAAGAGACGCTAGACAACCTTATTGCCCGTAGCCAGGATAAATAAAAAACGCCCGTTGATTGTAGTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTc                                                                                                                          <  2:970521/142‑1 (MQ=25)

                              acCAGTACGAAGAGAAGCCCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATaa                                                                                                                    <  1:159747/149‑1 (MQ=255)

                               ccAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                                                   >  1:1277249/1‑149 (MQ=255)

                               ccAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                                                   >  1:294483/1‑149 (MQ=255)

                               ccAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAg                                                                                                                   >  1:1032322/1‑149 (MQ=255)

                               ccAGTACGAAGAGAAACTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑CGCCGATGCCTGATGCGTCGCTGCCGCGGCTTATCCGGCCTCCGAGGTGCACTGACCGGTAGGGCg                                                                                                                         >  2:622122/1‑143 (MQ=255)

                                 aggaCGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAATACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGa                                                                                                                       <  2:385631/140‑1 (MQ=255)

                                   tACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATa                                                                                                                     >  2:913193/1‑143 (MQ=255)

                                        agagAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGc                                                                                                          <  1:938245/149‑1 (MQ=255)

                                        agagAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGc                                                                                                          <  1:721593/149‑1 (MQ=255)

                                           gaAGCTCGACAACCTGTTTACCCGGAGCCAGGTGAACTAAAAAACGCCCGTTGATTGTATTCGAA‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGAt                                                                                                             <  2:677071/143‑1 (MQ=255)

                                           gaAGCGCGACAACCCGTTTGCCGGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTCTAGGTCGGATAAGACGGATGGCGTc                                                                                                       <  1:672800/149‑1 (MQ=255)

                                              gCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGCCTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGTTAAGACGGATGGCGTCGCa                                                                                                    >  1:170984/1‑149 (MQ=255)

                                              gCTCGACAACCTGTTTGCCCGTAGCCAGGCGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGGTAAGACGGATGGCGTCGCa                                                                                                    >  1:795167/1‑149 (MQ=255)

                                                tCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACAGTAGGTCGGAAAAGACTGATGGCGTCGCATc                                                                                                  >  1:348420/1‑149 (MQ=255)

                                                   aCAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGa                                                                                               >  1:988565/1‑149 (MQ=255)

                                                    cAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCACCCggc                                                                                              >  1:35104/1‑147 (MQ=255)

                                                     aaCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCAACa                                                                                             >  1:1127285/1‑149 (MQ=255)

                                                     aaCCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGAATTAACAAGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACa                                                                                             >  1:304834/1‑149 (MQ=255)

                                                       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGCTAAGACGGATGGCGTCGCATCCGACAAc                                                                                           >  1:639248/1‑149 (MQ=255)

                                                           tttGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGAt                                                                                       <  1:265637/149‑1 (MQ=255)

                                                                  gTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGAt                                                                                >  1:1179884/1‑149 (MQ=255)

                                                                   tAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGc                                                                                     >  2:602683/1‑143 (MQ=255)

                                                                   tAGCCAGATAAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGAGGCCTGATGCGGCGCTGACGCGACTTATCAGGCCTACGAGGTCCACTGAACTGTAGGTCGTATAAGACGGATGGCGTCGCATCCGACAACCGATGc                                                                                     <  2:261133/143‑1 (MQ=18)

                                                                   caGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCGGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                                                               <  1:464360/148‑1 (MQ=255)

                                                                      ccAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcgc                                                                            >  1:936994/1‑149 (MQ=255)

                                                                       cAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgcc                                                                           <  1:1069807/149‑1 (MQ=255)

                                                                        aGGCGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGACGCCTGAt                                                                                >  2:228224/1‑143 (MQ=255)

                                                                         ggTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                                                         <  1:69090/149‑1 (MQ=255)

                                                                           tGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcg                                                                             >  2:291708/1‑143 (MQ=255)

                                                                             aaaTAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAc                                                                     >  1:925776/1‑149 (MQ=255)

                                                                              aaTAACAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGTCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGAGTCGCATCCGACAACCGATGCCTGATGcgccg                                                                          <  2:814747/143‑1 (MQ=255)

                                                                               acacaacgcGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGACGCGTCGCTGGCGCGACGTAGCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                                                         <  2:920843/135‑1 (MQ=18)

                                                                               aTAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGAGAAGACGGACGGGGTGGCAAACGGCGTTCGATGCCTGATGgaccgc                                                                         >  2:439456/1‑143 (MQ=18)

                                                                               aTAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                                                                         <  2:932736/143‑1 (MQ=255)

                                                                               aTAAAAAACGCCCGTAGATTGTATTCGAC‑AGCCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGGCGGGTAAGACGGACGGCGAGGCAGCCGACATCCGATGCCTGATGcgccgc                                                                         >  2:623207/1‑143 (MQ=17)

                                                                                tcacaaaCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCCCATCCGACAACCGATGCCTGATGCGCCGCt                                                                        <  2:467827/139‑1 (MQ=255)

                                                                                tAAAAAACGCCCGTTGATTGTATTCGACAAGCAGACTGGT‑ATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                                                                  >  1:314412/1‑149 (MQ=17)

                                                                                  aaaaaCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTCAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                                                                <  1:1142859/149‑1 (MQ=255)

                                                                                   aaaaCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGGCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAc                                                                     <  2:541369/143‑1 (MQ=255)

                                                                                     aaCGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAAGCATGGCGTCGCATCCGACCACCGATGCCTGATGCGCCGCTGCCGTGACTTa                                                             >  1:298461/1‑149 (MQ=255)

                                                                                       cGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGa                                                                 <  2:65101/143‑1 (MQ=255)

                                                                                          ccGTTGATTGGATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACtt                                                              <  2:302741/143‑1 (MQ=255)

                                                                                           cGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGc                                                       <  1:856158/149‑1 (MQ=255)

                                                                                            gttggttgTATTCGAC‑GGCCGGTGCGTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTAt                                                            <  2:628816/143‑1 (MQ=255)

                                                                                               acagttcagtgcaccccgtaggcctgataagtcgcgtcagcggcgcatcaggcCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCCGACGAGACCTATCa                                                          >  2:208996‑M2/54‑143 (MQ=255)

                                                                                                  tGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAGGTGGGTGATGAGGCCTTCggg                                                >  1:321914/1‑149 (MQ=17)

                                                                                                  tGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGcc                                                      >  2:963969/1‑143 (MQ=255)

                                                                                                      tccGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGc                                            <  1:104325/147‑1 (MQ=255)

                                                                                                      agtgcacctcgtagGCCTGATAAGTCGCGTCAGCGACGCATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTg                                             <  1:250327‑M1/135‑1 (MQ=255)

                                                                                                        tgcacctcgtagGCCTGATAAGTCGCGTCAGCGACGCATCAGGCATACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGgtgac                                           <  1:191139‑M1/137‑3 (MQ=255)

                                                                                                         gAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACgggg                                               >  2:570149/1‑143 (MQ=255)

                                                                                                             aGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATGGCGTCGCATCCGACAACCGATGCCTGACGCGCCGCTGACGCGGCTTGTCAGGCCTACGGGGTGc                                            >  2:229643/1‑143 (MQ=11)

                                                                                                             aGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGGGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGaa                                      <  1:760782/149‑1 (MQ=255)

                                                                                                              gCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAAc                                     <  1:1200919/149‑1 (MQ=255)

                                                                                                                   tGCCTGATGCGTCGCTGACGCGACTTATCGGGCCTACGAGGGGCACTGGACTGGAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGaa                                      <  2:397826/143‑1 (MQ=255)

                                                                                                                    gcctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAAc                                     >  2:389849‑M2/33‑143 (MQ=255)

                                                                                                                      CTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGaaccg                                   <  2:647625‑M1/143‑3 (MQ=255)

                                                                                                                      CTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACGGACCTg                                   <  2:1128419‑M1/143‑1 (MQ=255)

                                                                                                                         aggCGTCGCTGGTGCGAGTGGGCAGGCCTGGGCGGGGCACTGAACTGTAGGTCGGAGAAGACGGAGGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTGATCAGGCCTACGGGGTGCACTGAACTGTAg                                <  2:780468/141‑1 (MQ=14)

                                                                                                                          TGCGTCGCTGATGCGACTTTTCGGGCCTACTAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGAt                         >  1:1205386‑M1/1‑149 (MQ=255)

                                                                                                                           gCGTCGGTGAGGCGACTTATCAGGACTACGAGGTGCACTGAACTGAAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATa                        <  1:231838/149‑1 (MQ=255)

                                                                                                                            cGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTGATCAGGCCTACGGGGTGCACGGAACGGTAGGTc                             >  2:1112831/1‑143 (MQ=255)

                                                                                                                             gTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGCCGGATagg                      >  1:1077135/1‑147 (MQ=255)

                                                                                                                                    aCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATAGCGGCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACCTATCGGGCCTACGGGGGGCACCGAACCGTAGGCCGGacacga                     >  2:398617/1‑138 (MQ=11)

                                                                                                                                      gcgACTTATCAGGCCTACGAGGTGCACTGAACTGTGGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAAGTGTAGGTCGGATAAGACg                   >  2:295283/1‑143 (MQ=255)

                                                                                                                                       cgacgtcgcagccCCACGCGGTGCACTGAACTGTAGGTCGGAGAATACGGAGGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGc                  <  2:43512‑M2/130‑1 (MQ=255)

                                                                                                                                       cgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACCACCGATGCCTGATGCGCCGCTGACGTGGCTTTTCAAGCCAGGGGGGGCCCCTGAACTGTAGGTCGGACAAGACGc                  >  2:165791/1‑143 (MQ=14)

                                                                                                                                       caaCTTATCGGCCCTACGGGGGGCGCGGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGc                  <  2:18773/141‑1 (MQ=11)

                                                                                                                                         aCTTATCAGGCCTACGAGGTGCACGGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTc          <  1:614584/149‑1 (MQ=255)

                                                                                                                                          cTTATCAGGCGTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATa               <  2:546678/143‑1 (MQ=255)

                                                                                                                                           ttATCAGGCCTACGAGGGGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGTTCGGATAAGACGCATAg              <  2:841398/143‑1 (MQ=255)

                                                                                                                                             atcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATTCCTGATGCGCCGCTGACGTGGCTTATCAGGCCTACGGGGTGCACTGAACTGTAAGTCGGATAAGACGCATAGCGGCGCAt      >  1:155263‑M2/8‑149 (MQ=255)

                                                                                                                                              tcaggaCTACGAGGTGCACTAGACTGTAGGGCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATc     <  1:115050‑M2/143‑1 (MQ=255)

                                                                                                                                                aggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCCTCCg   >  1:485052‑M2/5‑149 (MQ=255)

                                                                                                                                                 ggcCTACGAGGTGCACTGAACTGCAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGa  >  1:718930‑M2/4‑149 (MQ=255)

GCAACGAGCTGTACGAAAGCATCAACTACTACCAGTACGAAGAGAAGCTCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGAC‑AGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGA  >  CP009273/345201‑345493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 8 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.