Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092733,208,0190AG20.8% 151.2 / 17.2 79E538E (GAA→GAG) rpoDRNA polymerase, sigma 70 (sigma D) factor
Reads supporting (aligned to +/- strand):  ref base A (33/28);  new base G (0/16);  total (33/46)
Fisher's exact test for biased strand distribution p-value = 3.39e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CCGGAAGACAAGATCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTAT  >  CP009273/3207873‑3208165
                                                                                                                                                  |                                                                                                                                                  
ccGGAAGACAAGATCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGaagg                                                                                                                                                  >  2:375263/1‑147 (MQ=255)
   gAAGACAAGATCCGCAAAGTGCTGAAGATCGCAAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCCAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCt                                                                                                                                               <  2:436730/149‑1 (MQ=255)
       aCAAGCACCCCAAGGTTCTGAAGACCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGTGTTGTTTCATGATACGGCGACCACCGAGAGCCtgcgt                                                                                                                                           <  1:803080/149‑1 (MQ=255)
       aCAAGATCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCtgcgt                                                                                                                                           >  2:58162/1‑149 (MQ=255)
         aagtgccGCAAAGTGCTGAAGAGCGCCAAAGAGCCCATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCTCATCTGGGGGATTTCATCGAGGATACCACCCTTTTTTTTTTTAATGATTCGGCGACCACCGAGAGCCtgcgtgc                                                                                                                                         <  1:741383/144‑1 (MQ=255)
         aaGATCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGCTTTCATCGAGGATACCACCCTCGACCTGCCGCTGGATTCTGCGACCACCGAAAGCCggcgtgc                                                                                                                                         >  1:689608/1‑149 (MQ=255)
           gATCCGCAAAGTGCTGAAGGTCGCCAAAGGGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCgg                                                                                                                                       <  2:454186/149‑1 (MQ=255)
           gATCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGCTACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCgg                                                                                                                                       >  1:805594/1‑149 (MQ=255)
            aTCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGc                                                                                                                                      >  2:382592/1‑149 (MQ=255)
            aTCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGc                                                                                                                                      >  2:722338/1‑149 (MQ=255)
              ccGCAAAGTCGCGAAGATCGCCAAAGCGCCAATCTCCATGGAACCGCCGATCGGTTATGATGAAGATTCGCATCTGGGGGATTTCACCGAGGATACCACCCTCGTTCTTTCTCATGATTCTGCGACCACCGAGAGCCTGCGTGCGGCaa                                                                                                                                    <  1:166413/149‑1 (MQ=255)
                     gTGCTGATGGTCGCCAAGGGGCCAAGCTCGTTGGTGACGCCGATCGGTGATGTTGAAGTTTCGCATCTGGGGGATTTCATCGAGGATACCACCGTTTTGCTGTTGCATGATTCGGCGACCACCGAGAGCCTGCGTGCGGCAACGCacga                                                                                                                             <  1:6341/149‑1 (MQ=255)
                     gTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGCTTCGCATCTGGGGGATTTCATCGAGGATACCACCCTTTTTTTGTTTAAGGATTCGGCGACCACCGAGAGCCTGCGTGCGGCAACGCacga                                                                                                                             <  1:714882/149‑1 (MQ=255)
                           aaGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTgct                                                                                                                       <  2:884762/149‑1 (MQ=255)
                               tCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGTTGCCGCAGGATTCGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTgctggct                                                                                                                   <  1:352726/149‑1 (MQ=255)
                                 gCCAAAGCGCCAATCCCCATGGAACCGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGTGTTTCCTCATGATTCGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGctggctgg                                                                                                                 <  1:755556/149‑1 (MQ=255)
                                  ccAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCtggctggc                                                                                                                <  2:76785/149‑1 (MQ=255)
                                   cAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCCCATCTGGGGGATTTCATCGAGGATACCACCCTCGAACTGCCGCTGGATTCTGCGACCACCGCAAGCCTGCGTGCGGCAACCCACGACGTGCTGGCTGGcc                                                                                                               >  2:363392/1‑149 (MQ=255)
                                             aTCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGCCcgcgcg                                                                                                     >  2:158488/1‑149 (MQ=255)
                                               ccccAGGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTCGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTg                                                                                                   <  2:540597/147‑1 (MQ=255)
                                               ccccAAGGAACCGCCAAACGGCGAGTGTGGAGATGCGCATCTGGGGGATTCCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTg                                                                                                   <  2:825413/147‑1 (MQ=255)
                                                tcCATGGAACCGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTTTTGTTTTTTAATGATACGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGa                                                                                                  <  1:719480/149‑1 (MQ=255)
                                                 gcATGGCTACGCCGTTTGGCGATGTTGCAGTTTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCTTTTTTTTTATTGATACGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGaa                                                                                                 <  1:11790/148‑1 (MQ=255)
                                                 ccATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCTTGCTAGTTCGTGCTGGCTGGCCTGACCGCGCGTGaa                                                                                                 <  2:436961/149‑1 (MQ=255)
                                                  cATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGGCGTGCTGGCTGGCCTGCCCGCGCGCGAAg                                                                                                >  1:843393/1‑149 (MQ=255)
                                                     gtaaccgctgcacGGTGATGAGGAAGACTCGCATCGGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCAACGACGCCCCGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCaa                                                                                             <  2:175417/137‑1 (MQ=255)
                                                      caaaCGCCGCTCGGTGAGGATCAACATCTGCATCTGGGGGATTTCATTGAAGCTACCCCCCTTTTTTTTTTGAATGATACGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCaaa                                                                                            <  1:270257/148‑1 (MQ=255)
                                                       aaaCGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCaaaa                                                                                           <  2:237136/149‑1 (MQ=255)
                                                            ccGGTCGGGGATGAGGGGGATTCGCATCTCGGGGATTGCATCGAGGAGACCACGCTTTTTTTTTTTCATGATACGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCt                                                                                      <  1:168441/149‑1 (MQ=255)
                                                             cGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTg                                                                                     <  2:56942/149‑1 (MQ=255)
                                                               aTCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCg                                                                                   <  2:522562/149‑1 (MQ=255)
                                                               aTCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCg                                                                                   <  2:79575/149‑1 (MQ=255)
                                                                    tgatgatgaAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGc                                                                              <  2:391165/149‑1 (MQ=255)
                                                                        gatgaAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGttt                                                                          <  2:845711/149‑1 (MQ=255)
                                                                        gatgaAGACTCGTCTTTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGTCGAATGATTCGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGttt                                                                          <  1:361235/149‑1 (MQ=255)
                                                                         atgaAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTc                                                                         >  2:96544/1‑149 (MQ=255)
                                                                         atgaAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGGGCTGGCGCGCCTGACCGCGCGTGAAACAACAGGTCCGCGGATGCGTGTc                                                                         >  1:572272/1‑149 (MQ=255)
                                                                          tgaAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCg                                                                        <  2:220308/149‑1 (MQ=255)
                                                                            aaGCTTCGCATCTGGGGGCTTTCATCGAGGCTACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGt                                                                      <  2:741943/149‑1 (MQ=255)
                                                                             aGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGATGAATTCTGCGCCCACCGAAAGCCTGCGTGCGGCCACGGGCGACGTGCTGGCTGGCCTGACCGCGGGTGACGCAAGAGGTCTGCGTGTGCGTTTCGGTa                                                                     >  2:237495/1‑149 (MQ=255)
                                                                              gATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTAt                                                                    >  2:887568/1‑149 (MQ=255)
                                                                              gATTCGCATCTGGGGCATTTCATCGAGGATACCACCCGCGAGCTGCCGCTGGATTCGGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTAt                                                                    <  1:631965/149‑1 (MQ=255)
                                                                               aTTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATc                                                                   >  2:597629/1‑149 (MQ=255)
                                                                                    cATCTGGGGGATTTCATCGAGGATACCACCCTCGGGTTGCCGCTGGATTCGGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGatat                                                              <  1:219838/149‑1 (MQ=255)
                                                                                    cATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGGGTGTGCGTTTTGGTATCgttgt                                                              >  2:15982/1‑145 (MQ=255)
                                                                                      tCTGGGGGACTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGa                                                            <  2:295343/149‑1 (MQ=255)
                                                                                       cTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGaa                                                           <  2:681568/149‑1 (MQ=255)
                                                                                        tGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATCCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGCCGTCCTGGCCGGCCGGACCGCGCGTGAAGCAAAAGTCCTGCACACGCGGTACGGTGTCGGTAGGagc                                                          >  1:258363/1‑147 (MQ=255)
                                                                                          ggggCTTTCATGGAGGATACCACCCTCGCGCTGTTGCAGGATACGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAacac                                                        <  1:115872/149‑1 (MQ=255)
                                                                                              aTTTTATCGAGGATACTACCCTCGTGTTGCCGCTGGATTCGGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGAc                                                    <  1:214652/149‑1 (MQ=255)
                                                                                               tttCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGAACCGGCTGGCCTGACCGCGCGTGAAGCAAAAGAACTGCGTATGCGTTCCGGAACCGATCTGCACACCGACt                                                   >  1:346253/1‑149 (MQ=255)
                                                                                                 tCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCAGGACGTGCTGGCTGGCCTGACCACGCGTGAAGCAAAAGTACTGCGGATGCGTTTCGCTAGCGATAGGAACACCGCCtgc                                                 >  1:1238/1‑147 (MQ=255)
                                                                                                  cATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTaca                                                >  2:112722/1‑149 (MQ=255)
                                                                                                    tCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAGCGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCCAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACg                                              >  2:150406/1‑149 (MQ=255)
                                                                                                       aGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGCCTACACGCTg                                           >  2:237202/1‑149 (MQ=255)
                                                                                                       aGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTg                                           <  2:744967/149‑1 (MQ=255)
                                                                                                        ggATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTgg                                          <  2:805594/149‑1 (MQ=255)
                                                                                                         gATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGGAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACCACACGCTGga                                         >  2:385705/1‑149 (MQ=255)
                                                                                                            accaccCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCGGGCCTGACCGCGCGTGAAGCAAAAGTTATGCGGATGAGTTTCGGTATCGATACGAAGACCGCCTAAGCGCCGgacaa                                      >  1:174399/1‑146 (MQ=255)
                                                                                                              caccCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTCTGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGaagaag                                    >  2:634453/1‑149 (MQ=255)
                                                                                                              caccCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGaagaag                                    <  2:146452/149‑1 (MQ=255)
                                                                                                               accCTCGAGCCGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGt                                   <  2:113459/149‑1 (MQ=255)
                                                                                                                 ccTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCCACCCACGGCGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTgg                                 <  2:249693/149‑1 (MQ=255)
                                                                                                                  cccGAGCTGCCGCTGGATTCTGCAACCACCGACAGCCTGTGGGCGGCAACGCACGACGTGCTGGCCGGCCTGCCCGCGCGTGAAGCAAAAGTTCTGCTTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTggg                                <  2:361623/147‑1 (MQ=255)
                                                                                                                   ttggggttccGCTGGATGCGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGt                               <  1:224250/141‑1 (MQ=255)
                                                                                                                           ccGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGtt                       <  2:769925/149‑1 (MQ=255)
                                                                                                                           ccGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGtt                       >  2:680250/1‑149 (MQ=255)
                                                                                                                               tGGATTCGGCGCCCCCCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGAc                   <  1:722338/149‑1 (MQ=255)
                                                                                                                               gtgATTCGGCGACCACCGAGAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGACCACCTGGTACTCGCTGGAAGAAGTGGGTAAACAGTTCGAc                   <  1:414408/147‑1 (MQ=255)
                                                                                                                                   ttCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTa               >  2:154515/1‑149 (MQ=255)
                                                                                                                                     cTGCGACCCCCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTAcc             <  1:382592/149‑1 (MQ=255)
                                                                                                                                      tGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTTGCCGCGCGTGAAGCAAAAGTTCTGCGTAAGCGTCTCGGTACCGCTATGAACACCCACTACACGCGGGAGGCAGTGGGTGAACAGCTCAACGTTAccc            >  1:111490/1‑149 (MQ=255)
                                                                                                                                      tGCGACCACCGAAAGCCTGCGTGCGGCAAAGCACAACGTGCTGGCAGGCCTTGCGGCAGGTGACGCAAAACTTAAACGCATGCGATTCCGGATCGATAGGAACACGGACAACACGCTGGCATAAGCGGGTAAGCAGTCGGACGCCAccc            >  1:442443/1‑149 (MQ=255)
                                                                                                                                       ccgcccaccGAAACCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACCCCGGGCGTGGAGAAGTGGGTAAACAGTTCGACGTTACCcg           <  2:436376/145‑1 (MQ=255)
                                                                                                                                         gACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCGGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTGTGCGTTTCGGTATCGATATGAACACCGGCTACACGCTGGAAGAAGTGGGTAAACAGTTTGACGTTACCcgag         >  1:220771/1‑147 (MQ=255)
                                                                                                                                           ccaccGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGGTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTGCACGCTGGACGAAGTGGGTGACCACTTCGACGGTACCcgccga       >  1:381430/1‑146 (MQ=255)
                                                                                                                                            caccGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACCGTTCGACGTTACCCGAGAAc      >  1:782367/1‑149 (MQ=255)
                                                                                                                                             accGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAGGAAGTGGGTACACAGTTCGCCGTGACCcgcgcccg     >  1:441968/1‑145 (MQ=255)
                                                                                                                                                gAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTAt  >  1:256329/1‑149 (MQ=255)
                                                                                                                                                gAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTAAGCGTTTCGGTATCGATATGAACACCGACTCCACGCTGGAAGCAGTGGGTAAACATTTCAAAGTTACCCGAGAACGTAt  >  1:621281/1‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CCGGAAGACAAGATCCGCAAAGTGCTGAAGATCGCCAAAGAGCCAATCTCCATGGAAACGCCGATCGGTGATGATGAAGATTCGCATCTGGGGGATTTCATCGAGGATACCACCCTCGAGCTGCCGCTGGATTCTGCGACCACCGAAAGCCTGCGTGCGGCAACGCACGACGTGCTGGCTGGCCTGACCGCGCGTGAAGCAAAAGTTCTGCGTATGCGTTTCGGTATCGATATGAACACCGACTACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTAT  >  CP009273/3207873‑3208165

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑