New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 2269338 =1 (0.020)55 (1.190) 45/290 0.1 98.2% coding (587/1026 nt) yejE microcin C transporter YejABEF, permease subunit; ABC family
?CP009273 = 3577555 NA (NA)intergenic (+15/‑1) insB1/yrhA IS1 transposase B/pseudogene, interrupted by IS1E

Only 100 of 104 total aligned reads displayed.

GCTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGAT  >  CP009273/2269198‑2269486
                                                                                                                                            |                                                                                                                                                    
gtcgACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGTGCGCCACAAGGCTATTACGGCGGTAAAGCCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCa                                                                                                                                                    <  2:418519/140‑1 (MQ=255)
 gcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAg                                                                                                                                                   >  2:224913‑M1/140‑143 (MQ=255)
   gACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggt                                                                                                                                           <  1:441257‑M1/149‑4 (MQ=255)
       cctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGcc                                                                                                                                       <  1:520208‑M1/16‑1 (MQ=255)
        ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCt                                                                                                                                      <  1:447790‑M1/17‑1 (MQ=255)
        ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGGCGTACGGCCt                                                                                                                                      <  1:64870‑M1/17‑1 (MQ=255)
        ctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagatggagtcgttaccCCAGCGTCGTa                                                                                                                                            <  2:205125‑M1/11‑1 (MQ=255)
         tgaatctggggtaccacctggcacggctgggacggacgaagtagtcattctcaaaatcggtggagctgcatgacaaagtcaacgcgcatttttttaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTa                                                                                                                                     >  1:461349‑M1/132‑149 (MQ=255)
          tGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCGCTGGGGACCACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCGGTTTTTGGTTATTTTACTTTCCAGCGTCGggtgatgctg                                                                                                                                    >  1:154265‑M1/1‑139 (MQ=255)
            ttCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTGGGTCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGGTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgtc                                                                                                                                  >  1:225373‑M1/1‑137 (MQ=255)
            atctgaggcagcacctggcacggctgggacggaactcgcggtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGc                                                                                                                                        >  2:334858‑M1/129‑143 (MQ=255)
                gaggcagcacctggcacggctgggacggaagtcgctgacgttcgcaaaatcggtggagctgcatgacaaagtcgtcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtg                                                                                                                              <  1:190112‑M1/25‑1 (MQ=255)
                  cGTGCTGGGCGTGCCGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaactta                                                                                                                            <  1:325325‑M1/149‑19 (MQ=255)
                    cagcacctggcacggctgggacggaagtcgctgtctttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaatgagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggtgg                                                                                                                          >  1:536622‑M1/121‑149 (MQ=255)
                    cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggtgctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggtgg                                                                                                                          >  1:567706‑M1/121‑149 (MQ=255)
                    cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggtgg                                                                                                                          >  1:322741‑M1/121‑149 (MQ=255)
                      aTGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTTCAGGGTCGggtgatgctgccaact                                                                                                                              >  2:204337‑M1/1‑127 (MQ=255)
                        cggggggcgggcgggggcgcTACGAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaactta                                                                                                                            <  2:224889‑M1/134‑19 (MQ=255)
                        acctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGgctgc                                                                                                                      <  1:312313‑M1/33‑1 (MQ=255)
                          ctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTGAAGCCTAACTTCtggtgg                                                                                                                          <  2:554829‑M1/29‑1 (MQ=255)
                           cGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGCAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgcccacttaccg                                                                                                                         >  2:194327‑M1/1‑122 (MQ=255)
                              gCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgctttagtgt                                                                                                                >  1:463956‑M1/1‑119 (MQ=255)
                                cgggttggacggaagtggctgtctttctcaaaatcggtggggctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggaggcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGctgctg                                                                                                                    >  2:209884‑M1/109‑143 (MQ=255)
                                  gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattacgCCGGCGTCGTACAGCCTAACTTCTGGTGGCTGTTGGTAGTTAc                                                                                                            <  1:299256‑M1/43‑1 (MQ=255)
                                  gctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGc                                                                                                                  <  2:197175‑M1/37‑1 (MQ=255)
                                   ctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgcacataaaacactatcaatcagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTAGCa                                                                                                                 <  2:682935‑M1/38‑1 (MQ=255)
                                    gggggCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGCTTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatg                                                                                                          <  1:420849‑M1/149‑37 (MQ=255)
                                     gggacggaagtcggtgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattctctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCtggccat                                                                                                               <  2:430078‑M1/40‑4 (MQ=255)
                                     gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAt                                                                                                               >  2:601888‑M1/104‑143 (MQ=255)
                                      gggCGCTGCAAGGCTATTACGGCGGCAACGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGTCGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgattttgtgtat                                                                                                              <  2:243431‑M1/143‑33 (MQ=255)
                                      gggCGCTACACGGCTACTGCGGCGGTAATGTCGACCTCCGGGGACAACGCTTTATTGCAGTGTGGTCTGGGTGGCCTACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtat                                                                                                              <  2:24084‑M1/143‑33 (MQ=255)
                                      ggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcatgaactgaacataaaacacaatcaataagttggagacattaccCCAGCGTCGTACAGCCTAACTCCTGGTGGCTGCTGCCAAtt                                                                                                              <  2:340033‑M1/41‑1 (MQ=255)
                                       gacggaagtcgctggcgttctcaaaatcggtggagctgcatgacaaagtcatcggacattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTCACTTCTGGTGGCTGCTGGCAGTTa                                                                                                             <  2:210571‑M1/42‑1 (MQ=255)
                                          ggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCAGCGTCGTCCAGCCTACCTTTTGGTGGCTGCTGGCAATTACTGTCTTGt                                                                                                    <  1:106722‑M1/51‑1 (MQ=255)
                                          ggaagccgctgccgttctcaaaatcggtggagtcgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGt                                                                                                    >  1:414554‑M1/99‑149 (MQ=255)
                                            tACCAGGCCATTACGGCGGTACAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCTACGCTGTTTTTGACTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggt                                                                                                        <  2:194577‑M1/143‑39 (MQ=255)
                                            tACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttattgatttagtgtatgatggtgttttt                                                                                                  <  1:407680‑M1/149‑45 (MQ=255)
                                              gtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACGGTCtt                                                                                                      <  2:265635‑M1/49‑1 (MQ=255)
                                                  ctgccgtcctcaaaatccgtgaagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGttt                                                                                                  >  2:209792‑M1/91‑143 (MQ=255)
                                                   tgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGa                                                                                           <  1:164420‑M1/60‑1 (MQ=255)
                                                         gctcaaaatcggtggagctgcatgacaaagtcatcgggcatgatctgaacataattcacgatcaataagttgtagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGa                                                                                           >  2:423847‑M1/84‑143 (MQ=255)
                                                         cggcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc                                                                                           >  2:630183‑M1/1‑92 (MQ=255)
                                                           tcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTg                                                                                   <  1:86165‑M1/68‑1 (MQ=255)
                                                           gcggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTCCTTTGCCGCGCCGggtgatgctgccaacttactgatgtagtctttgatggtgtttttgaggtgctc                                                                                         <  2:709081‑M1/143‑54 (MQ=255)
                                                            cggTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttcgtgtacgatggtgtttttgaggtgctcc                                                                                        >  2:100260‑M1/1‑89 (MQ=255)
                                                                  acctgatctCTGGGGACAACGCTTTATTGTAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggc                                                                                  <  2:680944‑M1/139‑61 (MQ=255)
                                                                   gTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt                                                                           >  1:701137‑M1/1‑82 (MQ=255)
                                                                        tctcTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                                                                      <  1:463634‑M1/149‑73 (MQ=255)
                                                                          ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCgtg                                                                          <  2:237030‑M1/77‑1 (MQ=255)
                                                                           ctGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttc                                                                         >  2:621229‑M1/1‑74 (MQ=255)
                                                                           ctGGGGACAACGACTTATCGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccatcttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag                                                                   <  1:199883‑M1/149‑76 (MQ=255)
                                                                              gggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg                                                                >  1:356940‑M1/1‑71 (MQ=255)
                                                                              gggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctg                                                                >  1:389095‑M1/1‑71 (MQ=255)
                                                                               ggccaatcttttatttaggtatggttGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgttgctgccaacttactgatttagtgtatgatggtgtttttgaggggccccagtggcttctgtttctatcagctgt                                                               <  1:58146‑M1/140‑80 (MQ=255)
                                                                               ggACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                                                               <  1:770028‑M1/149‑80 (MQ=255)
                                                                                 acaaagtcatcgggcagtatctgaacataaaacactatcagtaagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGTTgcggg                                                                   >  2:432873‑M1/60‑143 (MQ=255)
                                                                                 aCAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagcggcttctgtttctatcagatgtcc                                                             >  1:67205‑M1/1‑68 (MQ=255)
                                                                                 aCAACGCTTTATTGAAGGATGGCCGGGGGTGCCGACGTTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacctactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag                                                                   <  2:397635‑M1/143‑76 (MQ=255)
                                                                                  caaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGtt                                                            <  1:564064‑M1/91‑1 (MQ=255)
                                                                                   aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGGGttt                                                           <  1:766175‑M1/92‑1 (MQ=255)
                                                                                     agtcctcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGttttt                                                         >  1:719740‑M1/56‑149 (MQ=255)
                                                                                     agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGa                                                               >  2:462217‑M1/56‑143 (MQ=255)
                                                                                       cTTTATTGAAGTATGGTCGGGGATGCCGACGCTTGTCTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg                                                       <  1:598800‑M1/149‑88 (MQ=255)
                                                                                        tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccc                                                            >  2:398247‑M1/1‑61 (MQ=255)
                                                                                        tttATTGAAGTATGGTCGGGGATGCCGACGATGTTTTTGATGAGTTTACTTTCCAGCGTCGggtgatgctgccaacttactggtttagtgtatgatggtgtttttgaggtgctccagtggcgtctgtttctatgagctgtctctcctgt                                                      >  1:190431‑M1/1‑61 (MQ=255)
                                                                                          tATTGAAGTATGGTCGGGGATGCCGACGCTGTGTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                    <  1:709005‑M1/149‑91 (MQ=255)
                                                                                           aTTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctccttttca                                                   >  1:620372‑M1/1‑58 (MQ=255)
                                                                                             ggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTc                                                 >  1:301693‑M1/48‑149 (MQ=255)
                                                                                              gAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggggtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt                                                      >  2:208102‑M1/1‑55 (MQ=255)
                                                                                               cattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAGTTACTGTCTTGTTGGCCTGGATGGGTCTGGTCGGCGTGGTTCGGGCGGAGCTTTTACGt                                                     <  2:651829‑M1/98‑1 (MQ=255)
                                                                                                aGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                    <  2:341040‑M1/143‑91 (MQ=255)
                                                                                                 gTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcaccaactggtgttttctatcagctgtccctcctgttca                                                   <  2:690341‑M1/143‑92 (MQ=255)
                                                                                                 gTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGACGggtgatgctgccaacttactggtttagtgtatgatggtgtttttgagttgctccagtggcttgtgtttctatcagctgtcccgcctttcacgctact                                             >  1:307216‑M1/1‑52 (MQ=255)
                                                                                                     ggTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacg                                         <  1:757872‑M1/149‑102 (MQ=255)
                                                                                                     ctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTc                                         <  1:505649‑M1/110‑1 (MQ=255)
                                                                                                       gaacataaaacactatgaataagttggagacattaccCCAGCGTCGTACCGCCGAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGCCTGGGTGAGTCTGGTCGGCGTGGTGCGGGCGGAGATTTTACGTACTCGTAATTTCGa                                       <  1:500769‑M1/112‑1 (MQ=255)
                                                                                                       gaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAAATTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGGTGAGTCTGGTCGGCGTGGTGCGGGCGGGGTTTTTACGTACTCGTaa                                             <  2:4636‑M1/106‑1 (MQ=255)
                                                                                                        aacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGAc                                      <  1:51701‑M1/113‑1 (MQ=255)
                                                                                                           ataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTc                                         >  2:37669‑M1/34‑143 (MQ=255)
                                                                                                             aaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTAGCTGGATGAGTCTGGTCGGCGGGGTGCGGGCGGCGTTTTTACGTCATCGTAATTTcgg                                       <  2:540357‑M1/112‑2 (MQ=255)
                                                                                                                    tatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCg                          <  1:402529‑M1/125‑1 (MQ=255)
                                                                                                                    tatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCg                          <  1:26017‑M1/125‑1 (MQ=255)
                                                                                                                     gCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacgg                         <  1:302004‑M1/149‑118 (MQ=255)
                                                                                                                       tGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtggagctactgccggggtggttggtatcggca                       >  1:171395‑M1/1‑30 (MQ=255)
                                                                                                                        aataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGcac                      <  1:661001‑M1/129‑1 (MQ=255)
                                                                                                                          ttttGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacg                          <  2:313392‑M1/143‑117 (MQ=255)
                                                                                                                          caagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGATGCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAg                    >  1:480160‑M1/19‑149 (MQ=255)
                                                                                                                              ttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTGCGTACTCGTAATTTCGACTACATTCGTGCGGcac                      <  2:476916‑M1/129‑1 (MQ=255)
                                                                                                                              ttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTCTTTACGTACTCGTCATTTCGACTACATTCGTGCGGcac                      <  2:389993‑M1/129‑1 (MQ=255)
                                                                                                                                 tattTTACGTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgc             <  1:732966‑M1/149‑130 (MQ=255)
                                                                                                                                  attTTACTTTCCAGCGTCCggttatgcggccaacttaccgatgtagtgtacgatggtgtttttgaggtgctccagtggcttctgtttcgatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgcc            <  1:54179‑M1/149‑131 (MQ=255)
                                                                                                                                  agtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTgg            >  1:196042‑M1/11‑149 (MQ=255)
                                                                                                                                   ttttACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtggatgacggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgctgcgtaacggcaaaagcaccgccg           <  1:585997‑M1/149‑132 (MQ=255)
                                                                                                                                    tttACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctttttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac                >  2:251513‑M1/1‑17 (MQ=255)
                                                                                                                                    tcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCGTGGCg          <  1:299122‑M1/141‑1 (MQ=255)
                                                                                                                                       ttaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTg             <  2:431348‑M1/138‑1 (MQ=255)
                                                                                                                                       ttaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCAGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTg             <  2:229875‑M1/138‑1 (MQ=255)
                                                                                                                                        taccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAg      >  1:725402‑M1/5‑149 (MQ=255)
                                                                                                                                        cTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacat      <  1:268912‑M1/149‑137 (MQ=255)
                                                                                                                                          ttCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatca    <  1:699382‑M1/149‑139 (MQ=255)
                                                                                                                                            |                                                                                                                                                    
GCTGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACGCTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGAT  >  CP009273/2269198‑2269486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.