New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4029531 =	39 (0.950)	3 (0.080)	3/320	NT	8.3%	coding (909/1623 nt)	PP_3553	AMP‑binding domain protein
	?	AE015451	4029566 =	29 (0.750)					coding (944/1623 nt)	PP_3553	AMP‑binding domain protein

GCGGGGTACTGGCTGAAGGGTTTGCGGGTCGGCGACCATCAGGCCGTCGAGGGTCGGGTAGCGCACGCCTTGGCGAGACTTGATCCGCGCACGCTCTTCCAGCGAAAGCGCATCCCATTCGTCATGCCAGGCACACACGGTCACCGGGCCGTAGACCTCGGTCAGGCCATAGGTGTGGGTGACCTTGATGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4029768‑4029531 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccgTGGAGCAAATGGGCATCAAGGTCACCCACACCTATGGCCTGACCGAGGTCTACGGCCCGGTGACCGTGTGTGCCTGGCATGACGAATGGGATGCGCTTTCGCTGGAAGAGCGTGCGCGGATCAAGTCTCGCCAAGGCGTGCGCTACCCGACCCTCGACGGCCTGATGGTCGCCGACCCGCAAACCCTTCAGC  >  AE015451/4029566‑4029757                                                                                                                                                                                                                                                                                                                                                                                                                                                GCGGGGTACTGGCTGAAGGGTTTGCGGGTCGGCGACCATCAGGCCGTCGAGGGTCGGGTAGCGCACGCCTTGGCGAGACTTGATCCGCGCACGCTCTTCCAGCGAAAGCGCATCCCATTCGTCATGCCAGGCACACACGGTCACCGGGCCGTAGACCTCGGTCAGGCCATAGGTGTGGGTGACCTTGATGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCG                                                                                                                                                                                                     <  1:492622/235‑1  CGGGGTACTGGCTGAAGGGTTTGCGGGTCGGCGACCATCAGGCCGTCGAGGGTCGGGTAGCGCACGCCTTGGCGAGACTTGATCCGCGCACGCTCTTCCAGCGAAAGCGCATCCCATTCGTCATGCCAGGCACACACGGTCACCGGGCCGTAGACCTCGGTCAGGCCATAGGTGTGGGTGACCTTGATGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCG                                                                                                                                                                                                     >  2:709540/1‑234   GGGGTACTGGCTGAAGGGTTTGCGGGTCGGCGACCATCAGGCCGTCGAGGGTCGGGTAGCGCACGCCTTGGCGAGACTTGATCCGCGCACGCTCTTCCAGCGAAAGCGCATCCCATTCGTCATGCCAGGCACACACGGTCACCGGGCCGTAGACCTCGGTCAGGCCATAGGTGTGGGTGACCTTGATGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCGC                                                                                                                                                                                                    <  2:637343/234‑1                            GTCGGCGACCATCAGGCCGTCGAGGGTCGGGTAGCGCACGCCTTGGCGAGACTTGATCCGCGCACGCTCTTCCAGCGAAAGCGCATCCCATTCGTCATGCCAGGCACACACGGTCACCGGGCCGTAGACCTCGGTCAGGCCATAGGTGTGGGTGACCTTGATGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCGCCGTGGAGCAAATGGGCATCAAGGTCAC                                                                                                                                                                         <  1:476184/236‑1                                    CCATCAGGCCGTCGAGGGTCGGGTAGCGCACGCCTTGGCGAGACTTGATCCGCGCACGCTCTTCCAGCGAAAGCGCATCCCATTCGTCATGCCAGGCACACACGGTCACCGGGCCGTAGACCTCGGTCAGGCCATAGGTGTGGGTGACCTTGATGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCGCC                                                                                                                                                                                                   <  2:498797/202‑1                                                                                                                                 AGGCACACACGGTCACCGGGCCGTAGACCTCGGTCAGGCCATAGGTGTGGGTGACCTTGATGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCGCCGTGGAGCAAATGGGCATCAAGGTCACCCACACCTATGGCCTGACCGAGGTCTACGGCCCGGTGACCGT                                                                                                                               >  1:99083/1‑177                                                                                                                                                                                             TGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCGCCGTGGAGCAAATGGGCATCAAGGGCACCCACACCTATGGCCTGACCGAGGTCTACG                                                                                                                                            <  2:99083/104‑1                                                                                                                                                                                                                                              GTGGAGCAAATGGGCATCAAGGTCACCCACACCTATGGCCTGACCGAGGTCTACGGCCCGGTGACCGTGTGTGCCTGGCATGACGAATGGGATGCGCTTTCGCTGGAAGAGCGTGCGCGGATCAAGTCTCGCCAAGGCGTGCGCTACCCGACCCTCGACGGCCTGATGGTCGCCGACCCGCAACCCCTTCAGC  >  2:185264/1‑193                                                                                                                                                                                                                                                                                                                                                                                                                                                GCGGGGTACTGGCTGAAGGGTTTGCGGGTCGGCGACCATCAGGCCGTCGAGGGTCGGGTAGCGCACGCCTTGGCGAGACTTGATCCGCGCACGCTCTTCCAGCGAAAGCGCATCCCATTCGTCATGCCAGGCACACACGGTCACCGGGCCGTAGACCTCGGTCAGGCCATAGGTGTGGGTGACCTTGATGCCCATTTGCTCCACGGCGCCGATAACCTTGGCCGGTGGTGCGGCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/4029768‑4029531 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgccgTGGAGCAAATGGGCATCAAGGTCACCCACACCTATGGCCTGACCGAGGTCTACGGCCCGGTGACCGTGTGTGCCTGGCATGACGAATGGGATGCGCTTTCGCTGGAAGAGCGTGCGCGGATCAAGTCTCGCCAAGGCGTGCGCTACCCGACCCTCGACGGCCTGATGGTCGCCGACCCGCAAACCCTTCAGC  >  AE015451/4029566‑4029757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.