New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2086557 =	NA (NA)	3 (0.080)	3/320	NT	NA	coding (672/1302 nt)	PP_1865	transposase
	?	AE015451	2086620 =	NA (NA)					coding (735/1302 nt)	PP_1865	transposase

GGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2086794‑2086557 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgacgTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACG  >  AE015451/2086620‑2086852                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCG                                                                                                                                                                                                                                              <  1:298395/235‑1         TTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGc                                                                                                                                                                                                                                             >  2:203681/1‑227                 TCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCGCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTG                                                                                                                                                                                                                                                 <  1:761987/216‑1                                  CCGCTGGAACATCCCTTCAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGTGTCGAG                                                                                                                                                                                                                                    <  1:124992/212‑1                                           CATCCCTTCAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCG                                                                                                                                                                                                                                              <  2:154109/193‑1                                                   CAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGG                                                                                                                                                                                                                                                <  2:715266/183‑1                                                   CAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGG                                                                                                                                                                                                                                                >  1:715267/1‑183                                                                 CGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGG                                                                                                                                                                                                                                                >  1:18445/1‑169                                                                                                    GCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCT                                                                                                                                                                                            <  1:242483/186‑1                                                                                                             CAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGG                                                                                                                                                                                                       >  2:242482/1‑166                                                                                                                                                                                                                                        GGCGACGTGTCGAGTTAACGCTTCATTCACCAATCGACTCAGGTGATAACA                                                                                                                                                                                               <  2:285149/51‑1                                                                                                                                                                                                                                         GCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACA     >  1:562635/1‑236                                                                                                                                                                                                                                         GCGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACA     >  1:539285/1‑236                                                                                                                                                                                                                                          CGACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTG                    <  2:481824/220‑1                                                                                                                                                                                                                                            ACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACG  >  1:299716/1‑236                                                                                                                                                                                                                                            ACGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGAGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGCAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAAC   <  1:401089/235‑1                                                                                                                                                                                                                                             CGTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCC                  <  2:481377/219‑1                                                                                                                                                                                                                                              GTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAGCCCTCGGCAGTCCGCGAGCCGCCTTGCTT                                 <  1:154110/203‑1                                                                                                                                                                                                                                              GTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGATCTGGAGCTACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCTCGAGCCGCCTTGCTTGGATTCACCACTGCC                  <  1:421018/218‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTTTCAATTTCACTTTCCAGAATTGCTTCCAACCGCTGGAACATCCCTTCAATGCTCCAGCGGCGCCGATAGAAGTCTGCGATCTGTTGCGCACTGATGCTCTCGGGCAGGTTGCTCCAGAACATCAAGCTGTTATCACCTGAGTCGTTTGGTGAATGAAGCGTTAACTCGACACGTCGCCAGCGGTGCCCGCCTTTTACTTCGATGGATTGCTCGCGCACAGTGCCTGTGGCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/2086794‑2086557 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgacgTGTCGAGTTAACGCTTCATTCACCAAACGACTCAGGTGATAACAGCTTGATGTTCTGGAGCAACCTGCCCGAGAGCATCAGTGCGCAACAGATCGCAGACTTCTATCGGCGCCGCTGGAGCATTGAAGGGATGTTCCAGCGGTTGGAAGCAATTCTGGAAAGTGAAATTGAAACCCTCGGCAGTCCGCGAGCCGCCTTGCTTGGATTCACCACTGCCGTGCTGGCATACAACG  >  AE015451/2086620‑2086852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.