New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4447212	107 (1.360)	3 (0.040)	3/494	NT	3.0%	coding (3101/3780 nt)	tamB	translocation and assembly module for autotransporter export, inner membrane subunit
	?	NC_000913	= 4447554	93 (1.230)					coding (3443/3780 nt)	tamB	translocation and assembly module for autotransporter export, inner membrane subunit
Rejected: Frequency below/above cutoff threshold.

ACTGGAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4446915‑4447212 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtccacgtAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCGCCCTTCAGGGATGTTGATCTGCCCGTTCAGACCCAGCCCTTGTTTGTCCTGAACGAC  <  NC_000913/4447554‑4447274                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACTGGAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGAT                                                                                                                                                                                                                                                                                                    >  2:102350/1‑289   TGGAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG                                                                                                                                                                                                                                                                                                  <  1:503313/289‑1   TGGAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG                                                                                                                                                                                                                                                                                                  >  1:527417/1‑289   TGGAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTG                                                                                                                                                                                                                                                                                                  >  2:25246/1‑289     GAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAACGCGCAGTAGGCGTCTCCAGCGCTGTGGTGATGCTTAACGATAACCTGCACCCGGAAGAGCCGCACCAGGCGTCGATTCCGATTAACAGTAACCTGATTGT                                                                                                                                                                                                                                                                                                 >  2:515902/1‑288     GAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGT                                                                                                                                                                                                                                                                                                 >  1:529224/1‑288        CCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAATGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTCGGCGTCTCCTGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCca                                                                                                                                                                                                                                                                                             >  1:568705/1‑287          AAATTGGAAACTGGGGGGGGCGGGTAACGGCGAAAGGCAGTAAAGGGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGT                                                                                                                                                                                                                                                                                           <  1:198030/289‑1          AAATTGAAAGCTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGT                                                                                                                                                                                                                                                                                           <  1:135999/289‑1                                                   AAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGT                                                                                                                                                                                                                                                   <  1:372687/288‑1                                                                                                                    TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCG                                                                                                                                                                                                                                    <  2:58180/238‑1                                                                                                                    TACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCG                                                                                                                                                                                                                                    >  1:58180/1‑238                                                                                                                                                                                                                                                CAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGT                                                                                                                                                                                                                                                                                           >  2:8043/1‑59                                                                                                                                                                                                                                                CAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGT                                                                                                                                                                                                                                                                                           <  1:8043/59‑1                                                                                                                                                                                                                                                                                                 TTGTCCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCGCCCTTCAGGGATGTTGATCTGCCCGTTCAGACCCAGCCCTTGTTTGTCCTGAACG    >  1:135198/1‑289                                                                                                                                                                                                                                                                                                   GTCCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGCAGCGCCCTTCAGGGATGTTGATCTTCCCGTTCCGACCCAGCCCTTGTTTGTCCTGAACGAC  >  2:124279/1‑289                                                                                                                                                                                                                                                                                                   GTCCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCG                                                           >  2:175499/1‑232                                                                                                                                                                                                                                                                                                   GTCCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCG                                                           <  1:175499/232‑1                                                                                                                                                                                                                                                                                                     CCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCG                                                           >  2:361876/1‑230                                                                                                                                                                                                                                                                                                     CCACGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCG                                                           <  1:361876/230‑1                                                                                                                                                                                                                                                                                                        CGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCGCCCTTCAGGGATGTTGATCTGCCCGTTCAGACCCAGCCCTTGTTTGTCCTGA       <  1:686917/279‑1                                                                                                                                                                                                                                                                                                        CGTAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCGCCCTTCAGGGATGTTGATCTGCCCGTTCAGACCCAGCCCTTGTTTGTCCTGA       >  2:686917/1‑279                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACTGGAGCCAAATTGAAAACTGGCGGGCGCGGGTAACGGCGAAAGGCAGTAAAGTGCGGATCACCGTGCCGCCGATGGTACGAATGGATGTATCGCCAGATGTTGTATTCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGATTGTCCACGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/4446915‑4447212 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttgtccacgtAGCAAATAAGACAAGGCAGCTTGTTGCGACATCGCCGGGTCAGAGAAGATCTCCGCTTTCGGTTCGTCCGCCAGACCAGTGACGCGAACTCCGGCGATTACGTCGTCTTCTGTAGCATCCGGGTTACGAATAGCTTCAATATTAAGATACGGTTGATCTGGCGGACCAGAGAACAGTAACTCACCTTTACGCACAATCAGATCCTGACCATAGGCATGGAAGCGCCCTTCAGGGATGTTGATCTGCCCGTTCAGACCCAGCCCTTGTTTGTCCTGAACGAC  <  NC_000913/4447554‑4447274

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.