New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2405627 =	68 (0.780)	4 (0.050)	4/242	NT	6.4%	intergenic (‑555/+76)	nuoA/lrhA	NADH:ubiquinone oxidoreductase, membrane subunit A/transcriptional repressor of flagellar, motility and chemotaxis genes
	?	NC_000913	2405659 =	55 (0.690)					intergenic (‑587/+44)	nuoA/lrhA	NADH:ubiquinone oxidoreductase, membrane subunit A/transcriptional repressor of flagellar, motility and chemotaxis genes

GATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCA  >  NC_000913/2405516‑2405806                                                                                                                                                |                                                                                                                                                    gATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                                                 <  1:66472/148‑1 (MQ=255)  aTTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttttt                                                                                                                                               <  8:250789/149‑1 (MQ=255)  aTTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttttt                                                                                                                                               >  8:365024/1‑149 (MQ=255)    ttttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGtttttt                                                                                                                                              <  8:247577/148‑1 (MQ=255)     tttttCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTa                                                                                                                                             <  7:36032/148‑1 (MQ=255)           aGGGGATTATTTGTGCTTTCGGGACGTGAAGCTCTGGTGGTTTAAAAATGAACAGTTTTGTACGTTCTGCACTATGCTATGAAGTATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAtt                                                                                                                                      <  4:6032/149‑1 (MQ=255)           aGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACAATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTAtt                                                                                                                                      <  7:149000/149‑1 (MQ=255)               gATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTAAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGtc                                                                                                                                   >  2:139758/1‑148 (MQ=255)               gATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGATGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTAAACAATTGtc                                                                                                                                   >  1:98035/1‑148 (MQ=255)                 ttattTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCa                                                                                                                                <  1:5830/149‑1 (MQ=255)                   attTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAg                                                                                                                               >  4:16753/1‑148 (MQ=255)                        tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                                                 <  6:98109/125‑1 (MQ=255)                        tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGttt                                                                                                                                                 >  5:98109/1‑125 (MQ=255)                        tgCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATta                                                                                                                         >  7:174495/1‑149 (MQ=255)                        cggaaggggatgattcattgttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATta                                                                                                                         >  8:256846‑M1/89‑149 (MQ=255)                          cGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTAAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtat                                                                                                                        <  1:139758/148‑1 (MQ=255)                           gTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatc                                                                                                                       >  1:105657/1‑148 (MQ=255)                            ttCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCTAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                                                     >  7:259202/1‑149 (MQ=255)                            ttCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                                                     <  8:359449/149‑1 (MQ=255)                                      gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACCCCCCCAGCGGCTCGTTTTTTCCACTATTGTCTCAGGAATTATCTATCGTCCGTCg                                                                                                           >  2:362621/1‑149 (MQ=255)                                      gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATcgtccgtc                                                                                                            >  4:278967/1‑148 (MQ=255)                                      gAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATcgtccgtc                                                                                                            <  3:278967/148‑1 (MQ=255)                                        aTCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACAATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAt                                                                                                         <  5:141698/149‑1 (MQ=255)                                        aTCTCTGGTGGTTGAAAAATGAACAGTGTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAt                                                                                                         <  3:2106/149‑1 (MQ=255)                                           tctGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTAc                                                                                                      >  1:396076/1‑149 (MQ=255)                                           gttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGa                                                                                                                             >  6:209757‑M1/70‑126 (MQ=255)                                           gttgattgaaagggatatcgagtaatcgacggacgatagataattcctgagacaatagtgtaaaaaacgAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGa                                                                                                                             <  5:209757‑M1/57‑1 (MQ=255)                                             tggtggTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGAtt                                                                                                        <  7:365024/145‑1 (MQ=255)                                             tggtggCTGAAAAATGAACAGCTTTGAACGTTCTGCACAATGCGATGAACGAATTTTACAAAACAACAGCCGCTGGGGTGTAAAACCCCCCCAGCGGCTCCTTTTTTACACTATTGTCTCAGGAATTAGCTATCGTCCGTCGATTAc                                                                                                      <  2:173363/147‑1 (MQ=255)                                               gtggtgGAAAAATGAACAGTCTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGa                                                                                                  <  1:285359/149‑1 (MQ=255)                                               gtggtTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTGCTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGa                                                                                                  >  8:290367/1‑149 (MQ=255)                                                     gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                                                     >  8:274173/1‑124 (MQ=255)                                                     gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                                                     >  8:267973/1‑124 (MQ=255)                                                     gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                                                     <  7:274173/124‑1 (MQ=255)                                                     gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATtatcta                                                                                                                     <  7:267973/124‑1 (MQ=255)                                                     gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCg                                                                                                   >  3:173055/1‑142 (MQ=255)                                                     gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCg                                                                                                   <  4:173055/142‑1 (MQ=255)                                                     gAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATcc                                                                                             <  5:375901/148‑1 (MQ=255)                                                      aaaaaTGAACAGTTGTTTACGTTCTGCACTCTGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTCGGGTTTAAAACACCCCCAGCGGCTCTGTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATccc                                                                                            <  1:301619/148‑1 (MQ=255)                                                       aaaaTGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCtt                                                                                          <  8:27801/149‑1 (MQ=255)                                                        aaaTGAACAGTTATGTACGTTCTGCACTCTGCGATGAAGGATTTTTACAAAAAATCAGCCGCTGGGGGTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTCTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCttt                                                                                         <  6:329686/149‑1 (MQ=255)                                                             aaCAGTTTTGTACGTTCTGCACTATGAGATGCAGGATTTTTACTAAAAAAAAGCCTCTGGTGTTTAAAACACCCCCAGCGGCTCGTTATTAACACTATTGTCTCAGGACTTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaat                                                                                     <  1:254491/148‑1 (MQ=255)                                                              aCAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatc                                                                                    >  8:152065/1‑148 (MQ=255)                                                               cAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTGCTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatcaa                                                                                  <  7:290367/149‑1 (MQ=255)                                                               cAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTtcaatcaa                                                                                  <  1:367814/149‑1 (MQ=255)                                                                     tGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGACTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATg                                                                             <  2:387698/148‑1 (MQ=255)                                                                       tACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCTAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGaa                                                                           <  8:259202/148‑1 (MQ=255)                                                                       tACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGaa                                                                           <  8:1491/148‑1 (MQ=255)                                                                          gTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCCATGGGGTTTAAAACCCCCCCAGCGGCTCGTTTTTTAAACTATTGTATCAGGAATTAGATATGTTCCGTCGATTACTGGATATCCATTAAAAACAAAAATGAaacaa                                                                       >  4:371510/1‑148 (MQ=255)                                                                              tGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATcccc                                                                   >  5:296582/1‑149 (MQ=255)                                                                                 aatATGCGATTAAGGATTTTTACTAAATATAATCCGCTTGGGTTTTAAACAACCCCAGCGGCTCTTTTTTTACTCTATTGTCTCAGGAATTATCTATCGTCCGTCGATTAGTCGATATGCCTTTCAATCAACAATTAATCATCCCCTTc                                                                <  2:98035/147‑1 (MQ=255)                                                                                   taattcctgagacaatagtgtaaaaaacgagccgctgggggtgttttaaaccccagcggctCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCg                                                              >  8:256846‑M2/62‑149 (MQ=255)                                                                                   tATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCg                                                              >  1:362976/1‑149 (MQ=255)                                                                                       tcctgagacaatagtgtaaaaaacgagccgctgggggtgttttaaaccccagcggctCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATcaac                                                                                 >  6:209757‑M2/58‑126 (MQ=255)                                                                                       tcctgagacaatagtgtaaaaaacgagccgctgggggtgttttaaaccccagcggctCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATcaac                                                                                 <  5:209757‑M2/69‑1 (MQ=255)                                                                                        gATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAg                                                           >  5:1233/1‑147 (MQ=255)                                                                                           gAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGa                                                       >  7:319662/1‑148 (MQ=255)                                                                                            aaGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACa                                                     >  4:151529/1‑149 (MQ=255)                                                                                            aaGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACa                                                     >  5:120715/1‑149 (MQ=255)                                                                                             aGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACAt                                                    >  3:7765/1‑149 (MQ=255)                                                                                              ggATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACAtt                                                   <  3:16753/149‑1 (MQ=255)                                                                                                        tAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTAtt                                         <  2:362976/149‑1 (MQ=255)                                                                                                        tAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTAtt                                         >  7:373901/1‑149 (MQ=255)                                                                                                            aaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCa                                     >  1:119105/1‑149 (MQ=255)                                                                                                                AGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGa                                 >  3:151529‑M1/1‑149 (MQ=255)                                                                                                                 gccgctgggggtgttttaaaccccagcggctCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAt                                <  7:256846‑M2/118‑1 (MQ=255)                                                                                                                  CCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGAtt                               >  4:338917‑M1/1‑149 (MQ=255)                                                                                                                    GCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCTATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTAt                             >  3:94167‑M1/1‑149 (MQ=255)                                                                                                                    GCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTAt                             <  4:28213‑M1/149‑1 (MQ=255)                                                                                                                     CTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCttt                                                                                         >  7:64000‑M1/1‑88 (MQ=255)                                                                                                                     CTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCttt                                                                                         <  8:64000‑M1/88‑1 (MQ=255)                                                                                                                       GGGGTGAAAAACAGCCCCAGCGGCTCGTTTTTTACACTATAGTCTCAGGAATTATCTATGGTCCGTCGATTACTCGATATCACTTTCAATCAACACTGAATCATACCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGt                          >  2:292077‑M1/1‑149 (MQ=255)                                                                                                                        GGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATgg                           >  3:371510‑M1/1‑147 (MQ=255)                                                                                                                         GGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAg                        <  7:276024‑M1/149‑1 (MQ=255)                                                                                                                                  cacCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATc               <  2:396076/149‑1 (MQ=255)                                                                                                                                         agcggctCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGAt        <  8:276024‑M2/142‑1 (MQ=255)                                                                                                                                         agcggctCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGAt        <  8:373901‑M2/142‑1 (MQ=255)                                                                                                                                          gcggctCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATa       <  7:254762‑M2/143‑1 (MQ=255)                                                                                                                                              ctCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATc   <  7:58803‑M2/147‑1 (MQ=255)                                                                                                                                               tCGTTTTTTACACGATTGTCTCAGGATTTATCTATCGTCCGTCGAGTTCTCGATAGCCCTTTCAATCAACAATGAATCATCCCCTTCAGGAGCAGACAGTGGGCTGGATGGCAACGGTGGATGGTGGCTGTGCATCGCCTGTTAGATCa  >  2:324348/1‑149 (MQ=255)                                                                                                                                                |                                                                                                                                                    GATTTTTTTCAGGCGATTATTTGTGCGTTCGGGACGTGAATCTCTGGTGGTTGAAAAATGAACAGTTTTGTACGTTCTGCACTATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCA  >  NC_000913/2405516‑2405806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.