New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2822046 =79 (1.050)4 (0.060) 4/252 NT 5.2% intergenic (‑35/+93) alaS/recX alanyl‑tRNA synthetase/regulatory protein for RecA
?NC_000913 2822080 = 70 (0.970)intergenic (‑69/+59) alaS/recX alanyl‑tRNA synthetase/regulatory protein for RecA

AACAAAGTTGGGTCGTTATGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGA  >  NC_000913/2821899‑2822193
                                                                                                                                                   |                                                                                                                                                   
agaaaaagttaagatccagcgttttctgctctatcgtggctatctgatggaagatatccaggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttAc                                                                                                                                                    <  8:110334‑M1/2‑1 (MQ=255)
agaaaaagttaagatccagcgttttctgctctatcgtggctatctgatggaagatatccaggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttAc                                                                                                                                                    <  3:297470‑M1/2‑1 (MQ=255)
aacaaAGTTGGGTCGTTATGGGGTACCAGGGAGCTGGTGGCAACTAGCTGATGTCCCTTACTTTGGATAAAGTCGTGAGGCGCCTGAGGGATCTCGGCGGTGCTCTTGCTCATAATTTTGCTGAAATGGGGCTTGCGAAGTATCGccac                                                                                                                                                    >  8:221428/1‑149 (MQ=255)
aacaaAGTTGGGTCGTTATGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGccac                                                                                                                                                    >  3:83664/1‑149 (MQ=255)
aacaaAGTTGGGTCGTTATGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGcaac                                                                                                                                                    >  5:251465/1‑149 (MQ=255)
  aaaaagttaagatccagcgttttctgctctatcgtggctatctgatggaagatatccaggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacttatcttattccgacttttcagttACCa                                                                                                                                                  >  5:252170‑M1/146‑149 (MQ=255)
  aaaaagttaagatccagcgttttctgctctatcgtggctatctgatggaagatatccaggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttAc                                                                                                                                                    <  6:259056‑M1/2‑1 (MQ=255)
  aaaaagttaagatccagcgttttctgctctatcgtggctatctgatggaagatatccaggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttACCa                                                                                                                                                  >  8:333152‑M1/146‑149 (MQ=255)
     aagttaagatccagcgttttctgctctatcgtggctatctgatggaagatatccaggagatttggcgaaattttgacgactgaacgcatacggtattttacttcccagtcaagaaaacttatctaattcccacatttcagttaccatcc                                                                                                                                               <  7:163996‑M1/7‑4 (MQ=255)
       ttGGGTCGTTATGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTc                                                                                                                                              >  8:249405/1‑148 (MQ=255)
              gTTATGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCgtgt                                                                                                                                      <  4:283236/149‑1 (MQ=255)
               ttATGGGGTACCAGGGAGCTGCAGCCAACTACCTGAAGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCATCTCCAGCGAGTc                                                                                                                                     >  2:149426/1‑149 (MQ=255)
                 aTGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCt                                                                                                                                    >  1:133705/1‑148 (MQ=255)
                  tGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCtt                                                                                                                                   >  7:117206/1‑148 (MQ=255)
                  tGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCtt                                                                                                                                   <  4:6641/148‑1 (MQ=255)
                  tGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCtt                                                                                                                                   <  7:249405/148‑1 (MQ=255)
                   ggggTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTaa                                                                                                                                 >  7:228156/1‑149 (MQ=255)
                    gggTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTaa                                                                                                                                 <  5:125563/148‑1 (MQ=255)
                          cAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGCCGGATCTCAGCGGTGCTCGTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCgg                                                                                                                          >  1:5198/1‑149 (MQ=255)
                          cAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCgg                                                                                                                          >  2:236318/1‑149 (MQ=255)
                            gggAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGc                                                                                                                        >  7:9546/1‑149 (MQ=255)
                            gggAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGc                                                                                                                        >  2:259201/1‑149 (MQ=255)
                                 tcgtggctatctgatggaagatatccaggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttACCAGCTCCAGCGTGTCTTAACCGCCGGGCTgg                                                                                                                     >  1:269568‑M1/115‑147 (MQ=255)
                                      gctatctgatggaagatatccaggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacctatcttattcccacttttcagttACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTg                                                                                                               >  7:157035‑M1/110‑148 (MQ=255)
                                         aaCTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAg                                                                                                                                           <  2:117592/117‑1 (MQ=255)
                                         aaCTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAg                                                                                                                                           >  1:117592/1‑117 (MQ=255)
                                          aCTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAAGGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAg                                                                                                          >  6:160639/1‑149 (MQ=255)
                                              ccTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTgg                                                                                                       <  1:321652/148‑1 (MQ=255)
                                              acTGATGTCACTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATATCAGCGGTGCTCTTGCTCATAATTATCCTTAAATCAAGCTAACGAAATATCGACACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTACTGAAAAGTgg                                                                                                       <  6:251465/146‑1 (MQ=255)
                                               cTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAAc                                                                                                                                <  7:304565/122‑1 (MQ=255)
                                               cTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAAc                                                                                                                                >  8:304565/1‑122 (MQ=255)
                                                tGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGaa                                                                                                    >  3:79822/1‑149 (MQ=255)
                                                 gATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGaa                                                                                                    >  2:331230/1‑148 (MQ=255)
                                                  aTGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGaa                                                                                                    <  5:177421/147‑1 (MQ=255)
                                                  aTGGCCCTTACTATTGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATCTCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAat                                                                                                   <  4:223316/148‑1 (MQ=255)
                                                    gTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataa                                                                                                 <  8:60679/148‑1 (MQ=255)
                                                    gTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataa                                                                                                 <  4:11076/148‑1 (MQ=255)
                                                     tCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGAGCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataag                                                                                                <  3:285969/148‑1 (MQ=255)
                                                        cTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataagat                                                                                              >  1:154897/1‑147 (MQ=255)
                                                           aggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAAc                                                                                                                 >  8:20763‑M1/89‑125 (MQ=255)
                                                           aggagatttggcgaaattttgccgactgaacgcatacggtattttacttcccagtcaagaaaacttatcttattcccacttttcagttACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAAc                                                                                                                 <  7:20763‑M1/37‑1 (MQ=255)
                                                             tATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataaga                                                                                               <  8:34612/141‑1 (MQ=255)
                                                             tATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAataaga                                                                                               >  7:34612/1‑141 (MQ=255)
                                                              aTGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTc                                                                                      >  7:8500/1‑149 (MQ=255)
                                                               tGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAGCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTc                                                                                      <  7:221428/148‑1 (MQ=255)
                                                               tGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGtttt                                                                                       <  8:117206/147‑1 (MQ=255)
                                                                  aaaaaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGa                                                                                  <  8:9546/149‑1 (MQ=255)
                                                                   aaaaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGAc                                                                                 <  1:236318/149‑1 (MQ=255)
                                                                     aaGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTg                                                                               <  2:133705/149‑1 (MQ=255)
                                                                           agaAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGt                                                                         <  3:225062/149‑1 (MQ=255)
                                                                                     gACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCg                                                                >  2:313784/1‑148 (MQ=255)
                                                                                      aCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTaaaa                                                                     >  8:121960/1‑142 (MQ=255)
                                                                                      aCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTaaaa                                                                     <  7:121960/142‑1 (MQ=255)
                                                                                      aCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGt                                                               <  1:314992/148‑1 (MQ=255)
                                                                                      aCGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTa                                                              <  4:79822/149‑1 (MQ=255)
                                                                                       cGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTAt                                                             >  6:104424/1‑149 (MQ=255)
                                                                                        ggATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATg                                                            >  5:259056/1‑149 (MQ=255)
                                                                                            ctcAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGtt                                                        >  2:49740/1‑149 (MQ=255)
                                                                                             tcAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGtt                                                        >  7:107546/1‑148 (MQ=255)
                                                                                               aGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGtt                                                        <  5:38550/146‑1 (MQ=255)
                                                                                               aGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAg                                                     >  8:44193/1‑149 (MQ=255)
                                                                                               aGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAg                                                     <  1:331230/149‑1 (MQ=255)
                                                                                               aGCGGTGATCTTGCTCATAATTATCGTGACTTCAAGCTAACGAAATATCGCCACCAGCTCAAGCGTGTCTTAACCGCCGGGATGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGtt                                                        <  1:149426/146‑1 (MQ=255)
                                                                                                        ctTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCaaaa                                            >  5:215839/1‑149 (MQ=255)
                                                                                                         ttGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCTTATGCGTTCAGTCGGCTAAAt                                           >  4:27572/1‑149 (MQ=255)
                                                                                                         ttGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAAt                                           >  6:67835/1‑149 (MQ=255)
                                                                                                             tCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCg                                       >  5:5008/1‑149 (MQ=255)
                                                                                                             tCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCg                                       >  2:168183/1‑149 (MQ=255)
                                                                                                              cATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCTGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGc                                      >  1:96529/1‑149 (MQ=255)
                                                                                                               aTAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTa                                                                        >  3:322236/1‑114 (MQ=255)
                                                                                                               aTAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTa                                                                        <  4:322236/114‑1 (MQ=255)
                                                                                                               aTAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGc                                      <  5:104424/148‑1 (MQ=255)
                                                                                                               aTAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGc                                      >  4:16932/1‑148 (MQ=255)
                                                                                                                        cTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTcc                             <  8:228156/148‑1 (MQ=255)
                                                                                                                        cTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCt                            <  5:160639/149‑1 (MQ=255)
                                                                                                                           aaaTCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTg                           <  6:215839/147‑1 (MQ=255)
                                                                                                                               cAAGCTAACGAAATATCGCCACCAGCTCCAGCGTCTATAAACCGCCCGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGACAAATCTCCTGGATATc                     >  2:9054/1‑149 (MQ=255)
                                                                                                                                aaGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACTGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCt                    >  4:212391/1‑149 (MQ=255)
                                                                                                                                 aGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCtt                   >  8:286306/1‑149 (MQ=255)
                                                                                                                                  gCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc                  <  1:259201/149‑1 (MQ=255)
                                                                                                                                  gCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc                  >  2:66976/1‑149 (MQ=255)
                                                                                                                                  gCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTc                  <  1:313784/149‑1 (MQ=255)
                                                                                                                                      aCGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATc              <  4:83664/149‑1 (MQ=255)
                                                                                                                                       cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                        <  2:26358/122‑1 (MQ=255)
                                                                                                                                       cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                        <  5:119616/122‑1 (MQ=255)
                                                                                                                                       cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                        >  6:119616/1‑122 (MQ=255)
                                                                                                                                       cGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTc                                        >  1:26358/1‑122 (MQ=255)
                                                                                                                                        gAACTATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGaa                                                                           <  4:44370/86‑1 (MQ=255)
                                                                                                                                        gAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCAt               >  1:302383/1‑146 (MQ=255)
                                                                                                                                        gAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCGGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGAAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCATGGATATCTTCAAt               >  8:163996/1‑146 (MQ=255)
                                                                                                                                            tatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg        <  1:66976/149‑1 (MQ=255)
                                                                                                                                            tatCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAg        >  5:86763/1‑149 (MQ=255)
                                                                                                                                                  caccaGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGa  <  5:67835/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
AACAAAGTTGGGTCGTTATGGGGTACCAGGGAGCTGCTGGCAACTACCTGATGTCCCTTACTATGGAAAAAGTCGAGAAACGCCTGACGGATCTCAGCGGTGCTCTTGCTCATAATTATCCTGAAATCAAGCTAACGAAATATCGCCACCAGCTCCAGCGTGTCTTAACCGCCGGGCTGGTAACTGAAAAGTGGGAATAAGATAAGTTTTCTTGACTGGGAAGTAAAATACCGTATGCGTTCAGTCGGCAAAATTTCGCCAAATCTCCTGGATATCTTCCATCAGATAGCCACGA  >  NC_000913/2821899‑2822193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.