New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1417458 =79 (1.050)5 (0.070) 5/244 NT 6.8% intergenic (‑72/+30) recE/racC Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease/Rac prophage; uncharacterized protein
?NC_000913 1417483 = 65 (0.930)intergenic (‑97/+5) recE/racC Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease/Rac prophage; uncharacterized protein

CTTGCCCACAGGACGACGTCAGGTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGCACATTTTTTTGACACCTTCATCAAGT  >  NC_000913/1417310‑1417605
                                                                                                                                                    |                                                                                                                                                   
atggtccatcaggcaacgtaaaaacacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaa                                                                                                                                                     <  4:152977‑M1/1‑1 (MQ=255)
    tccatcaggcaacgtaaaaacacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgctattaaaaggtgaaatctgaaagaaATAGc                                                                                                                                                 <  4:129706‑M1/5‑1 (MQ=255)
     ccACAGGACGACGTCAGGTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGcc                                                                                                                                                >  8:285079/1‑149 (MQ=255)
     ccACAGGACGACGTCAGGTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGcc                                                                                                                                                >  3:129706/1‑149 (MQ=255)
      catcaggcaacgtaaaaacacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCt                                                                                                                                               >  8:242642‑M1/143‑149 (MQ=255)
      catcaggcaacgtaaaaacacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCt                                                                                                                                               >  3:152977‑M1/143‑149 (MQ=255)
       atcaggcaacgtaaaaacacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCt                                                                                                                                               <  8:236385‑M1/7‑1 (MQ=255)
       atcaggcaacgtaaaaacacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCt                                                                                                                                               >  7:236385‑M1/142‑148 (MQ=255)
       atcaggcaacgtaaaaacacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCTg                                                                                                                                              >  8:42382‑M1/142‑149 (MQ=255)
       acaGGACGACGTCAGGTTCACCGGATGATTTTATCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTCTTTTTTAACCTCAACTCAGATTAAAATACGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTCTTCATAGCCTg                                                                                                                                              >  3:41000/1‑149 (MQ=255)
        tcaggcaacgtaaaaacacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCTgc                                                                                                                                             <  5:67178‑M1/9‑1 (MQ=255)
          ggACGACGTCAGGTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTgcgc                                                                                                                                           >  4:52257/1‑149 (MQ=255)
          ggACGACGTCAGGTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTgcgc                                                                                                                                           <  2:259440/149‑1 (MQ=255)
                  gcaggcgcACCGGATGAGTTTTTCGCGTTCCGTACCAGGAAGAGTGGTCTTGGGCGCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGAGCTTGCCGGATACACACTGGTCATAGCCTGCGCCATACGCa                                                                                                                                   <  4:70534/142‑1 (MQ=255)
                    aGGTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTGTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAACTTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAg                                                                                                                                  <  4:291191/148‑1 (MQ=255)
                     ggTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGc                                                                                                                                >  7:168700/1‑149 (MQ=255)
                      gTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGc                                                                                                                                >  8:1163/1‑148 (MQ=255)
                      gTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTGTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTAGATTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGc                                                                                                                                >  4:102268/1‑148 (MQ=255)
                       acacttgatgaaggtgtcaaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCTGCGCCATACGCAGGCTa                                                                                                                              >  4:156302‑M1/126‑149 (MQ=255)
                          aCCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTAtt                                                                                                                            <  1:6109/148‑1 (MQ=255)
                               atgatTTTTTCGATTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTAtttctttc                                                                                                                      <  2:310177/149‑1 (MQ=255)
                                tgatTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCa                                                                                                                     <  8:168700/149‑1 (MQ=255)
                                  atTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGa                                                                                                                   <  7:1163/149‑1 (MQ=255)
                                   ttttttCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGAt                                                                                                                  >  3:72307/1‑149 (MQ=255)
                                   ttttttCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGAt                                                                                                                  >  2:166415/1‑149 (MQ=255)
                                       ttCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCa                                                                                                              >  2:41934/1‑149 (MQ=255)
                                         aaaaaaatgtgcctggtgcatatcggaaagaatctgcccgcagaaaaaaaagccgaatttctggcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCAcc                                                                                                            <  7:143136‑M1/42‑1 (MQ=255)
                                          gCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCt                                                                                                           >  3:38620/1‑149 (MQ=255)
                                                cGTAACAGGAAGAGGGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAAt                                                                                                     <  5:282498/149‑1 (MQ=255)
                                                 gTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAAtt                                                                                                    >  8:105276/1‑149 (MQ=255)
                                                 gTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGAGCCATACGCAGGCTATTTCTTTAAGATTTCACCTTTTAAtt                                                                                                    >  3:65349/1‑149 (MQ=255)
                                                  tAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAAttt                                                                                                   <  7:303064/149‑1 (MQ=255)
                                                   aaCAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAAttt                                                                                                   >  5:128998/1‑148 (MQ=255)
                                                      atgAAGAGTGGTTTTGTGCGCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCAtt                                                                                               <  2:37029/147‑1 (MQ=255)
                                                      aGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCAtt                                                                                               <  1:166415/149‑1 (MQ=255)
                                                      aGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCAtt                                                                                               >  2:256302/1‑149 (MQ=255)
                                                      aGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCAtt                                                                                               >  8:95191/1‑149 (MQ=255)
                                                      aGGAAGAGTGGTTTTGTGCTCATTGTTATTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTCCGCCATACGCAGGCTATATCGTTCACATTTCACCTTTTAATTTCAtt                                                                                               >  3:101297/1‑149 (MQ=255)
                                                      aGGAAGAGTGGGTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCAtt                                                                                               <  6:58186/149‑1 (MQ=255)
                                                       ggAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTg                                                                                              >  4:14824/1‑149 (MQ=255)
                                                        gAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGTCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTg                                                                                              >  6:67178/1‑148 (MQ=255)
                                                        gAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTg                                                                                              >  3:185312/1‑148 (MQ=255)
                                                             gTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTa                                                                                        <  7:285079/149‑1 (MQ=255)
                                                             gTGGTTTAGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGCTACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTa                                                                                        <  4:41000/149‑1 (MQ=255)
                                                                gTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTaga                                                                                      <  3:14824/148‑1 (MQ=255)
                                                                      tgCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCa                                                                               <  4:185312/149‑1 (MQ=255)
                                                                        cTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGTATGGCGCAGGCTAt                                                                                                                             >  7:11029/1‑101 (MQ=255)
                                                                        cTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGTATGGCGCAGGCTAt                                                                                                                             <  8:11029/101‑1 (MQ=255)
                                                                         tCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCa                                                                                                                                   >  1:186254/1‑94 (MQ=255)
                                                                         tCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCa                                                                                                                                   <  2:186254/94‑1 (MQ=255)
                                                                           aTTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGaaa                                                                           <  3:79595/148‑1 (MQ=255)
                                                                            ttGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGCTCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAAtt                                                                         >  2:288501/1‑149 (MQ=255)
                                                                              ccgcagaaaaaaaagccgaatatcttgcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCg                                                                       >  6:156151‑M1/71‑149 (MQ=255)
                                                                               ttttttAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCgg                                                                      >  4:217871/1‑149 (MQ=255)
                                                                               ttttttAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCgg                                                                      <  1:41934/149‑1 (MQ=255)
                                                                                     aaCCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCtttt                                                                 <  7:86794/148‑1 (MQ=255)
                                                                                      aaaaaagccgaatttctggctactctaattgcaatgaaataaataggtgaaatctcaaagaaATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTATTTTCATTGCAATTAGAGTTGCCAGAAATTCGGCtttttt                                                               >  8:143136‑M1/63‑149 (MQ=255)
                                                                                        cTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCtttttttt                                                             >  2:30772/1‑149 (MQ=255)
                                                                                        cTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCtttttttt                                                             <  2:102782/149‑1 (MQ=255)
                                                                                        cTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCttttttt                                                              >  4:90144/1‑148 (MQ=255)
                                                                                           aaCTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTc                                                            <  3:48152/147‑1 (MQ=255)
                                                                                           aaCTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTg                                                          >  8:152409/1‑149 (MQ=255)
                                                                                            aCTCAGATTAAAATTCGTTCTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACTCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGc                                                         <  2:86118/149‑1 (MQ=255)
                                                                                             cTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCg                                                        >  8:256241/1‑149 (MQ=255)
                                                                                              cgaatttcttgcaactctaattgcaatgaaattaaaaggtgaaatctgaaagaaATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCgg                                                       >  6:186857‑M1/55‑149 (MQ=255)
                                                                                                aGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCgg                                                       <  3:52257/147‑1 (MQ=255)
                                                                                                     aaaaTTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGAt                                                 <  5:219021/148‑1 (MQ=255)
                                                                                                           cGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTc                                           <  4:38620/148‑1 (MQ=255)
                                                                                                           cGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTc                                           <  7:105276/148‑1 (MQ=255)
                                                                                                             ttttGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCa                                                                               <  6:289707/110‑1 (MQ=255)
                                                                                                             ttttGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGa                                        <  8:270214/149‑1 (MQ=255)
                                                                                                               ttGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGata                                      >  4:212564/1‑149 (MQ=255)
                                                                                                                  ttCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCg                                                                       >  3:246440/1‑113 (MQ=255)
                                                                                                                  ttCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCg                                                                       <  4:246440/113‑1 (MQ=255)
                                                                                                                  ttCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTAAGATTTCACCTTTTAATTTCATTGCAATTATAGTTGCCACAAATTAGTCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATg                                    >  5:44/1‑148 (MQ=255)
                                                                                                                     aGTGAATGATCTTGCCGGAAACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTGTTTTTTCTGCGGGCAGATTCTTTCCGATATGCAc                                 >  6:91122/1‑148 (MQ=255)
                                                                                                                      gTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCAc                                 >  7:22906/1‑147 (MQ=255)
                                                                                                                      gTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCa                               <  5:186294/149‑1 (MQ=255)
                                                                                                                       tGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTc                                           >  1:27266/1‑136 (MQ=255)
                                                                                                                       tGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTc                                           <  2:27266/136‑1 (MQ=255)
                                                                                                                         aaTGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAgg                             >  3:113263/1‑148 (MQ=255)
                                                                                                                         aaTGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGc                            <  6:19468/149‑1 (MQ=255)
                                                                                                                         aaTGATCTTGCCGGAAACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTATTTCAGATTTCACATTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCCGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAgg                             >  5:101735/1‑148 (MQ=255)
                                                                                                                             ctCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTATGCGGGCAGATTCTTTCCGATATGCACCAGGCACAt                        >  1:19510/2‑149 (MQ=255)
                                                                                                                                    cGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGCACAttttttt                  >  8:305048/1‑148 (MQ=255)
                                                                                                                                     ggATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGCACATTTTTTTGa                <  7:152409/149‑1 (MQ=255)
                                                                                                                                           acacTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAAtt                                                                                         <  3:58829/70‑1 (MQ=255)
                                                                                                                                           acacTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAAtt                                                                                         >  4:58829/1‑70 (MQ=255)
                                                                                                                                             acTGTTCATAGCCTGCGCCATACGCGGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTCGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGCACATTTTTTTGACACCTtca        >  3:182244/1‑149 (MQ=255)
                                                                                                                                             acTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCa                                  <  2:261078/123‑1 (MQ=255)
                                                                                                                                             acTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCa                                  >  1:261078/1‑123 (MQ=255)
                                                                                                                                             acTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGCACATTTTTTTGACACCTtca        <  1:30772/149‑1 (MQ=255)
                                                                                                                                                   cATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGCGCATTTTTTTGACACCTTCATCAAgt  >  7:22834/1‑149 (MQ=255)
                                                                                                                                                    ATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGCACATTTTTTTGACACCTTCATCAAgt  >  3:217871‑M1/1‑148 (MQ=255)
                                                                                                                                                    ATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCCTTCCGATATGCACCAGGCACATTTTTTTGACACCTTCATCAAgt  >  3:90144‑M1/1‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CTTGCCCACAGGACGACGTCAGGTTCACCGGATGATTTTTTCGCTTTCCGTAACAGGAAGAGTGGTTTTGTGCTCATTGTTTTTTAACCTCAACTCAGATTAAAATTCGTTTTGTTCAGTGAATGATCTTGCCGGATACACACTGTTCATAGCCTGCGCCATACGCAGGCTATTTCTTTCAGATTTCACCTTTTAATTTCATTGCAATTAGAGTTGCCAGAAATTCGGCTTTTTTTTCTGCGGGCAGATTCTTTCCGATATGCACCAGGCACATTTTTTTGACACCTTCATCAAGT  >  NC_000913/1417310‑1417605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.