New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	972559 =	35 (0.920)	4 (0.110)	4/246	4.4	11.2%	coding (808/894 nt)	ycbJ	protein kinase‑like domain protein
	?	NC_000913	972607 =	31 (0.880)					coding (856/894 nt)	ycbJ	protein kinase‑like domain protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGGACTAATGCTTTGGGCACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATACGGCCAAGCGTTTCATAGCCAACACGATCGCTAT  >  NC_000913/972411‑972704                                                                                                                                                     |                                                                                                                                                  gggACTAATGCTTTGGGCACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATg                                                                                                                                                   <  5:39301/149‑1 (MQ=255)      tAATGCTTTGGGCACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGtt                                                                                                                                              >  3:11652/1‑149 (MQ=255)      tAATGCTTTGGGCACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGCAGTCGTTCATCTGGCGGCGTTGCTTGTATGTGTTATCGGATGAAGtt                                                                                                                                              >  2:179223/1‑149 (MQ=255)            tttGGGCACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTgcgcc                                                                                                                                         >  2:77519/1‑147 (MQ=255)                 gctccGCGAGAATACGAACTGTTCCGACTATTGGATAATTCTCTGGGGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCTGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGt                                                                                                                                   <  1:179223/146‑1 (MQ=255)                  cACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGtt                                                                                                                                  <  2:156130/149‑1 (MQ=255)                                        ccGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCgg                                                                                                             <  4:11652/148‑1 (MQ=255)                                         cGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGgcg                                                                                                           >  7:12512/1‑149 (MQ=255)                                         cGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGgcg                                                                                                           >  7:10253/1‑149 (MQ=255)                                                  gATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGa                                                                                                  >  1:165356/1‑149 (MQ=255)                                                    tAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGtt                                                                                                                                  >  6:15373/1‑115 (MQ=255)                                                    tAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGtt                                                                                                                                  <  5:15373/115‑1 (MQ=255)                                                         ctctGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATAc                                                                                                                             <  2:50915/115‑1 (MQ=255)                                                         ctctGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATAc                                                                                                                             >  1:50915/1‑115 (MQ=255)                                                              gCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTgg                                                                                                                                    >  8:148797/1‑103 (MQ=255)                                                              gCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTgg                                                                                                                                    <  7:148797/103‑1 (MQ=255)                                                                    gATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGCCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGGTGCGCAACGGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCAct                                                                                <  4:47347/149‑1 (MQ=255)                                                                         gCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTgg                                                                                             >  4:78483/1‑131 (MQ=255)                                                                                  ttACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCg                                                                  >  7:30243/1‑149 (MQ=255)                                                                                          aaCGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACg                                                           >  2:171349/1‑148 (MQ=255)                                                                                           aCGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGaa                                                         <  2:165356/149‑1 (MQ=255)                                                                                                 gcCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCtttt                                                   <  8:10253/149‑1 (MQ=255)                                                                                                 gcCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCtttt                                                   <  8:12512/149‑1 (MQ=255)                                                                                                 gcCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCttt                                                    >  3:132061/1‑148 (MQ=255)                                                                                                          ggAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGAtt                                                                                                                    <  4:102142/75‑1 (MQ=255)                                                                                                                            gcgTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATACGGCCAAGCGtt                        <  8:30243/149‑1 (MQ=255)                                                                                                                                  gttgTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATACGGCCAAGCGTTTCATa                   <  4:132061/148‑1 (MQ=255)                                                                                                                                         gtgtTATGGGATGAAGTTGCGCAACTGGTTAATAACGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCTAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATACGGCCAAGCGTTTCAGAGCCAacac           >  3:136692/1‑149 (MQ=255)                                                                                                                                          tgtTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATACGGCCAAGCGTTTCATAGCCAacac           >  7:112486/1‑148 (MQ=255)                                                                                                                                                 ggATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAACATCACTCTTGCCGTGGCTCGCCTGACGCACCTTTTAGCCACTGCCAGATCAGGCCCAGCGGTTCATAGCCAACACGATCGCTa   >  8:68296/1‑149 (MQ=255)                                                                                                                                                 ggATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATACGGCCAAGCGTTTCATAGCCAACACGATCGCTa   >  1:43617/1‑149 (MQ=255)                                                                                                                                                  gATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTGGCCACTGCCAGATACGGCCAAGCGTTTCATAGCCAACACGATCGCTAt  >  4:40267/1‑149 (MQ=255)                                                                                                                                                  gATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATAc                                   >  2:92395/1‑116 (MQ=255)                                                                                                                                                  gATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATAc                                   <  1:92395/116‑1 (MQ=255)                                                                                                                                                  gATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATACGGCCAAGCGTTTCATAGCCAACACGATCGCTAt  <  1:171349/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                  GGGACTAATGCTTTGGGCACCGCGAGAATACGAACTGTTCCGACTAATGGATAATTCTCTGGCGGAAGATTTGCTCTGGAGTTACCTGCAACGCGCGCCAGTGGCGGAGTCGTTCATCTGGCGGCGTTGGTTGTATGTGTTATGGGATGAAGTTGCGCAACTGGTTAATACCGGACGATTTAGTCGGCGCAACTTCGATCTGGCATCAAAATCACTCTTGCCGTGGCTCGCCTGACGAACCTTTTAGCCACTGCCAGATACGGCCAAGCGTTTCATAGCCAACACGATCGCTAT  >  NC_000913/972411‑972704

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.