| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 578,199 | C→T | 42.1% | I31I (ATC→ATT) | rzpD → | DLP12 prophage; putative murein endopeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 578,199 | 0 | C | T | 42.1% | 58.3 / 64.3 | 76 | I31I (ATC→ATT) | rzpD | DLP12 prophage; putative murein endopeptidase |
| Reads supporting (aligned to +/- strand): ref base C (20/23); new base T (17/14); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.53e-01 | |||||||||||
AAGGCCTGATGACTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGA > NC_000913/578052‑578345 | aaGGCCTGATGACTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCAGTCAATCATTACCGTGATAACG‑CAATCg > 7:220323/1‑149 (MQ=255) gCCTGATGACTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATAATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGcc > 4:317541/1‑148 (MQ=255) gatgaCTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGAATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACa > 6:187840/1‑148 (MQ=255) atgaCTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACaaa < 6:123472/149‑1 (MQ=255) gtcgtGAGATTGAGCGTGAAGTCTCTTTGTGGGGGCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGATCAATAATTAACTTGATAAAT‑CAATAGCCTACAAAGTCAAgc > 7:353498/1‑149 (MQ=255) ttGAGCGTGAAGTCTGTTTGTGCCGCCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTCATTATCTGCATCATCGTCAGCCTGTCATGGGCGGGCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCACCGCGACaaa > 5:4801/1‑148 (MQ=37) tGAAGTCTGTTTGTGGGGGCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGc > 3:255292/1‑146 (MQ=255) aaGTCTGTTTGTTGGGGCAACAGGGAGCAGAGTCACCGCGATTATATACGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCaga < 6:105064/148‑1 (MQ=255) gtattgttGTGGGGGCAACAGTGAGCAGAGTAACCGAGAGTATATCCGCTCTGATTATCTGCATCATCTTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGaa < 2:199497/143‑1 (MQ=25) ggggCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGc < 4:255292/149‑1 (MQ=255) gCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGaa < 5:148594/149‑1 (MQ=255) gatgtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGCTTATCTGCATCATCGTCTGCCTGTCATGGTCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAAc > 2:272482/7‑149 (MQ=11) atgtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGc < 3:203957/121‑1 (MQ=11) atgtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCa > 4:315251/6‑128 (MQ=11) atgtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCa < 3:315251/123‑1 (MQ=11) tgtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCCTCGTCTGCCTGTCATGGGCGGTTTATCATTCCCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAAcgc > 3:300436/5‑149 (MQ=11) gtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCaga > 1:183910/4‑128 (MQ=11) gtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCaga < 2:183910/125‑1 (MQ=11) gtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAAc < 1:217212/129‑1 (MQ=11) gtatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAAc > 2:217212/4‑132 (MQ=11) cAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAAcgcg > 7:344002/1‑149 (MQ=255) tatGAGCAGAGTCACCGCGATTATCTCCGCTCTGTTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATACCG‑GCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAAcgcg < 6:191777/146‑1 (MQ=11) tatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCa > 6:105395/3‑125 (MQ=11) tatGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCa < 5:105395/123‑1 (MQ=11) gTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCgg > 6:174608/1‑148 (MQ=255) tGAGCAGAGTCACCGCGATTATCTCCGCTCTGTTTATCTGCATCATCGTCTGCCTGTCATTGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGc < 6:109236/148‑1 (MQ=11) tGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCagag > 3:311728/1‑126 (MQ=11) tGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCagag < 4:311728/126‑1 (MQ=11) tGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCtg < 4:230302/137‑2 (MQ=11) tGAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCtg > 3:230302/1‑136 (MQ=11) gAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGa > 8:210068/1‑131 (MQ=11) gAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGa < 7:210068/131‑1 (MQ=11) gAGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCtg < 2:218203/136‑2 (MQ=11) aGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCagag > 5:6182/1‑124 (MQ=11) aGCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCagag < 6:6182/124‑1 (MQ=11) aGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCAGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAAt < 8:220323/149‑1 (MQ=255) gCAGAGTCACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAgcgc > 8:65908/1‑107 (MQ=11) agagTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCTGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGc < 6:91822/134‑1 (MQ=255) agagTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGc > 5:91822/1‑134 (MQ=255) ccGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATg > 2:96416/1‑149 (MQ=11) cgcgATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATg > 8:169899/1‑148 (MQ=255) ctCCGATCTGGTTATCTGCATCATCGTCTGCCTGTCATGGGCTGTTAATGATTACCGAGATAACG‑ACATTACCTACAACGCCCAGCGCGCCAAAAATGCAAGAGAACTGAAGCTGGAGCACGCGGCAATTACTGACATGAAGATGCGt > 6:236726/2‑148 (MQ=255) gCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCTAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCg < 8:103696/149‑1 (MQ=255) tGATTATCTGCATCATCGTCACCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑GATTCGCCTACAATGTCCAGCGCGACAAAAATGCCAGAGATCTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGAt < 6:4801/149‑1 (MQ=17) gtgaTCTTCATCATCGTCTGCCTGTCATGGGCGGGTAATCATTACCGTGATAACG‑CCATTACCTAAAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTGGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGt < 4:188766/146‑1 (MQ=11) aTTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGt > 1:106550/1‑149 (MQ=255) catcatCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTtgct < 5:174608/145‑1 (MQ=255) catcatCGTCAGCATGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTgcgc > 8:153312/1‑149 (MQ=255) atcatcGTCAGCCTGTCATGGGCTGTAAATCATTACCGTGATAAAG‑CCATTACATACAAAGCCCATCGCGACAAAAATGCAAGAGAACTGAACCTGGCTAACACGGCAATAACTGACATGCAGATGCGTCAGAGTGATGTTGCTGCGCt > 8:249689/1‑149 (MQ=255) tcatcGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTc > 7:305095/1‑149 (MQ=255) catcGTCTGCCTGTCATGGGCTGTTAATCATTACCGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCACAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCTGCGTGATGTTGCTGCGCTc > 6:382667/1‑148 (MQ=11) catcGTCTGCCTGTCATGGGCTGTTAATCATTAACGTGATAACG‑CCATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGATAACTGAAGCTGTCTAACTAGGCAATTACTGACATTCAGATGAGTCAGAGTGATGTTTCTGAGCTc > 6:67882/1‑148 (MQ=255) atcGGCAGCCTGTCATGGGCGGTCTATCTTTACCGTGATCTGT‑CATTCGCGTACTTAGTCCAGCGCGTGATATATGCCAGTGAACTGATGCTAGCGATCGGGGCTATTACTGACATGCATATGCGTCAGCGTGATGTTGCTGCGCTCgt < 6:71059/149‑2 (MQ=12) tcGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGAt < 6:133371/149‑1 (MQ=255) gCCTGTCATGGGCGGTCAATCATTAGCGTGATAACG‑CAATCGCCTACAAAGTCCTGCGCGACAAAACTGCCAGAGCACTGAAGCTAGCGATCGCGGCAATTACTGACCTGCAGATGCGGCAGCGTGATGTTGCTGCGCTCGATGCaaaa < 2:278439/149‑1 (MQ=17) tCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAg > 6:347098/1‑108 (MQ=255) tCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAg < 5:347098/108‑1 (MQ=255) tCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATac < 5:187840/147‑1 (MQ=255) ggatgttaaTCATTACCGTGATAACG‑CAATTACCTACAAAGCCCAGCGCGACAAAAATGCCAGAGAAATGAAGCTTGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAg < 1:97848/141‑1 (MQ=11) ggCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAg < 2:106550/148‑1 (MQ=255) gCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAg > 2:314392/1‑147 (MQ=255) ggTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGAGACAAAAATGCCAGAGACCTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGt < 5:341392/149‑1 (MQ=255) tCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTa < 7:352744/149‑1 (MQ=255) tCAATCATTACCGTGATAACG‑CAATCGACTACAAAGTCCAGCGCGAAAAAAATGCCAGAGAACTGAAGATAGCGAACGCGGCAATTACTGACATGAAGATGCGTCAGCTTGATGTTGCTGCTCTCGATGCAAAATACACGaa > 8:217084/1‑142 (MQ=14) aTTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAATCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGAt < 3:317541/149‑1 (MQ=255) aTTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGa < 7:169899/148‑1 (MQ=255) ttACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGAAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATg > 4:359584/1‑149 (MQ=255) ttACAGTGATAACGACAAT‑ACATACAAATCCCAGCGAGACAAAAAAGCCAGAGAACTGAAGCTGGCGAACGAGGCAATTACTGACAAGCAGATGCGTCAGAGAGAAGTTGCTGCGATAGATGAAAAATACACGAAGGAGTTAGCTGAt > 4:314430/1‑148 (MQ=2) tACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGc > 6:149577/1‑149 (MQ=255) gTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGaaa < 8:305095/149‑1 (MQ=255) tGATAACG‑CCATTACATACAAAGCCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTCGCGAACGCGGCAATTACTGACATGAAGATGCGTCAGCGTGATCTTCCTGCCCTCGAAGCAAAATCCACGAAGCAGTAAGCTGATGATAAAg > 4:283889/1‑149 (MQ=11) aTAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCt > 2:165247/1‑149 (MQ=255) cG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTa < 1:303938/130‑1 (MQ=255) cG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTa > 2:303938/1‑130 (MQ=255) g‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGaaaa > 7:225440/1‑149 (MQ=255) aTCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAatga < 7:153312/149‑1 (MQ=39) | AAGGCCTGATGACTCGTCGTGAGATTGAGCGTGAAGTCTGTTTGTGGGGGCAACAGTGAGCAGAGTAACCGCGATTATATCCGCTCTGATTATCTGCATCATCGTCAGCCTGTCATGGGCGGTCAATCATTACCGTGATAACG‑CAATCGCCTACAAAGTCCAGCGCGACAAAAATGCCAGAGAACTGAAGCTAGCGAACGCGGCAATTACTGACATGCAGATGCGTCAGCGTGATGTTGCTGCGCTCGATGCAAAATACACGAAGGAGTTAGCTGATGCGAAAGCTGAAAATGA > NC_000913/578052‑578345 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |