New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3652036 =NA (NA)3 (0.040) 3/262 NT 4.4% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3838500 65 (0.960)coding (253/924 nt) yicL EamA family inner membrane putative transporter
Rejected: Frequency below/above cutoff threshold.

GCAGTTTTTGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTGCGCTATTTT  >  NC_000913/3838355‑3838648
                                                                                                                                                 |                                                                                                                                                    
gCAGTTTTTGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTg                                                                                                                                                   <  4:287279/149‑1 (MQ=255)
gCAGTTTTTGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTg                                                                                                                                                   >  4:210811/1‑149 (MQ=255)
    tttttGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTaa                                                                                                                                                      >  4:265584/1‑142 (MQ=255)
    tttttGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTaa                                                                                                                                                      <  3:265584/142‑1 (MQ=255)
    tttttGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACa                                                                                                                                               <  5:213528/149‑1 (MQ=255)
              tGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACtttt                                                                                                                                     >  7:68651/1‑149 (MQ=255)
               gACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACa                                                                                                                                               <  5:184024/138‑1 (MQ=255)
               gACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACa                                                                                                                                               >  6:184024/1‑138 (MQ=255)
                 cgcgTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGAACAGCTCACTTTTTTg                                                                                                                                  >  7:195118/1‑149 (MQ=255)
                  gcgTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGc                                                                                                                                 >  8:162596/1‑149 (MQ=255)
                  gcgTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGc                                                                                                                                 >  6:297877/1‑149 (MQ=255)
                    gTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCt                                                                                                                                >  5:57471/1‑148 (MQ=255)
                     tttGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGc                                                                                                                                 >  8:42924/1‑146 (MQ=255)
                     tttGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGc                                                                                                                                 <  7:42924/146‑1 (MQ=255)
                        gATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCa                                                                                                                           >  4:191327/1‑149 (MQ=255)
                        gATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCa                                                                                                                           >  7:393466/1‑149 (MQ=255)
                        gATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGAAGCCTTTAGCCTGCTGATTTTTTCCGTGGTTGGTGGGCTAACTGTACAGCGAAGTTTTTTGCTAAc                                                                                                                             >  6:104777/1‑147 (MQ=255)
                              cGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGaa                                                                                                                      <  2:13508/148‑1 (MQ=255)
                               gCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGaaa                                                                                                                     >  8:151555/1‑148 (MQ=255)
                                 cGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAAggaaggtgcgaataagcggggaaattcttctcggct                                                                                                                  >  2:155377‑M2/1‑113 (MQ=255)
                                   gTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATc                                                                                                                 >  8:30150/1‑148 (MQ=255)
                                      tGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGaa                                                                                                              <  7:30150/148‑1 (MQ=255)
                                         ttCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCa                                                                                                          <  5:297877/149‑1 (MQ=255)
                                              cTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACATCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCAc                                                                                                     >  7:328296/1‑149 (MQ=255)
                                              cTGACGCTGTCATTTGTTCATGGCGATAAAATATTTTCTATTATTAACAATCAAAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACttttt                                                                                                                                    >  4:168470/1‑118 (MQ=255)
                                                    cTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAAc                                                                                               <  8:310734/149‑1 (MQ=255)
                                                         aTTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACa                                                                                                                                               <  1:178556/96‑1 (MQ=255)
                                                         aTTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACa                                                                                                                                               >  2:178556/1‑96 (MQ=255)
                                                             gTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGtgctgc                                                                                       >  7:258738/1‑148 (MQ=255)
                                                             gTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGtgctgc                                                                                       <  8:393466/148‑1 (MQ=255)
                                                              ttCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCaa                                                                                     >  8:150272/1‑149 (MQ=255)
                                                                 aTGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCAGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTc                                                                                  >  5:373422/1‑149 (MQ=255)
                                                                    gCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCAAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCctc                                                                               <  7:345422/149‑1 (MQ=255)
                                                                      gATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGGGCTGCAATTCCtctc                                                                             <  8:46681/149‑1 (MQ=255)
                                                                         aaaaTCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCAcc                                                                          >  8:310535/1‑149 (MQ=255)
                                                                           aaTCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTACCCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACcga                                                                        <  3:210811/149‑1 (MQ=255)
                                                                            aTCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACcgac                                                                       <  3:191327/149‑1 (MQ=255)
                                                                                tttCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGAt                                                                    >  1:73602/1‑148 (MQ=255)
                                                                                 ttCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGAACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACcgacg                                                                      <  8:195118/145‑1 (MQ=255)
                                                                                   cTATTATTAACAATCATAAAGATGGCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTAt                                                                 <  7:110460/148‑1 (MQ=255)
                                                                                    tattatTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTAtcg                                                               >  8:151329/1‑149 (MQ=255)
                                                                                      ttattaACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTAtcgt                                                              <  7:310535/148‑1 (MQ=255)
                                                                                       tattaACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTAtcgtcg                                                            >  5:343296/1‑149 (MQ=255)
                                                                                         ttaACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGc                                                           <  7:162596/148‑1 (MQ=255)
                                                                                            aCAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTgg                                                       >  4:145385/1‑149 (MQ=255)
                                                                                            aCAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTg                                                        <  7:150272/148‑1 (MQ=255)
                                                                                               aTCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTtc                                                    >  8:309110/1‑149 (MQ=255)
                                                                                                   tAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAAggaaggtgcgaataagcgggga                                                                                                                                >  3:297565‑M2/1‑47 (MQ=255)
                                                                                                   tAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAAggaaggtgcgaataagcgggga                                                                                                                                <  4:297565‑M2/69‑23 (MQ=255)
                                                                                                       gATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGt                                            <  5:283155/149‑1 (MQ=255)
                                                                                                         tGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGc                                          <  8:68651/149‑1 (MQ=255)
                                                                                                              ttAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCaa                                                                                     <  8:4710/101‑1 (MQ=255)
                                                                                                              ttAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCaa                                                                                     >  7:4710/1‑101 (MQ=255)
                                                                                                              ttAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTaa                                      >  4:363733/1‑148 (MQ=255)
                                                                                                                aGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAAt                                    <  8:258738/148‑1 (MQ=255)
                                                                                                                 gCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACATCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATc                                   <  8:328296/148‑1 (MQ=255)
                                                                                                                 gCCTGCTGATGTTTTCCGTGGTTGGCGCGCTAACTGAACAGATCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCTTCGCCTGGTTCTCACTGGTGCGTAAATcg                                  >  6:360489/1‑149 (MQ=255)
                                                                                                                    tgctgATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCgcgc                               >  8:99473/1‑149 (MQ=255)
                                                                                                                     gctgATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGcc                              >  3:170301/1‑149 (MQ=255)
                                                                                                                      ctgATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGccc                             <  7:99473/149‑1 (MQ=255)
                                                                                                                      ctgATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGccc                             >  2:61529/1‑149 (MQ=255)
                                                                                                                       tgATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCg                            >  5:218965/1‑149 (MQ=255)
                                                                                                                        gATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCgg                           >  7:42675/1‑149 (MQ=255)
                                                                                                                         aTTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCggg                          <  7:309110/149‑1 (MQ=255)
                                                                                                                         aTTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCgg                           <  6:343296/148‑1 (MQ=255)
                                                                                                                           tttttCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCa                        >  5:201896/1‑149 (MQ=255)
                                                                                                                                 cGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTgg                  <  6:218965/149‑1 (MQ=255)
                                                                                                                                      ttGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTc             <  3:363733/149‑1 (MQ=255)
                                                                                                                                      ttGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTc             <  4:170301/149‑1 (MQ=255)
                                                                                                                                        ggCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCt            <  2:73602/148‑1 (MQ=255)
                                                                                                                                           gcgcTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTgcgc        >  4:209714/1‑149 (MQ=255)
                                                                                                                                           gcgcTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTgcgc        >  4:214746/1‑149 (MQ=255)
                                                                                                                                              cTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTGCGCTAt     >  1:393143/1‑149 (MQ=255)
                                                                                                                                               tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtt     >  7:46480‑M2/1‑3 (MQ=255)
                                                                                                                                               tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                                      <  8:398676‑M2/99‑97 (MQ=255)
                                                                                                                                                aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt   <  7:177807‑M2/149‑148 (MQ=255)
                                                                                                                                                 aggaaggtgcgaataagcggggaatttcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                           >  6:86554‑M2/1‑1 (MQ=255)
                                                                                                                                                 aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt   <  8:12121‑M2/148‑148 (MQ=255)
                                                                                                                                                 aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgca                           <  5:86554‑M2/124‑124 (MQ=255)
                                                                                                                                                 aCTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTGCGCTAtttt  <  7:151329/149‑1 (MQ=255)
                                                                                                                                                 aCTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTGCGCTAttt   <  6:57471/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
GCAGTTTTTGACTATGACGCGTTTGATATTCGCCGGTTTGATTCTACTGACGCTGTCATTTGTTCATGGCGATAAAATCTTTTCTATTATTAACAATCATAAAGATGCCATTAGCCTGCTGATTTTTTCCGTGGTTGGCGCGCTAACTGTACAGCTCACTTTTTTGCTAACCATCGAAAAATCGAACGCAGCCACGGCAACGGTGCTGCAATTCCTCTCACCGACGATTATCGTCGCCTGGTTCTCACTGGTGCGTAAATCGCGCCCGGGCATTCTGGTTTTCTGCGCTATTTT  >  NC_000913/3838355‑3838648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.