Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,002,530	G→A	G729D (GGT→GAT)	xdhA →	xanthine dehydrogenase, molybdenum binding subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,002,530	0	G	A	100.0%	93.0 / NA	28	G729D (GGT→GAT)	xdhA	xanthine dehydrogenase, molybdenum binding subunit
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (12/16);  total (12/16)

CGACCATGCCGGATCTGCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGGTGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGATTTTGCTTCTTACCATCGCGCAGCAACCCTTGCCGATGCCATCAAC  >  NC_000913/3002386‑3002667                                                                                                                                                 |                                                                                                                                          cGACCATGCCGGATCTGCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGtt                                                                                                                                       <  1:190268/149‑1 (MQ=255)  gACCATGCCGGATCTGCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTg                                                                                                                                      <  4:7852/149‑1 (MQ=255)           ggATCTGCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTg                                                                                                                                      <  5:133023/140‑1 (MQ=255)           ggATCTGCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTg                                                                                                                                      >  6:133023/1‑140 (MQ=255)                 gCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTCGGTGAGCCACCAATAATTCCTGATTCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGc                                                                                                                       >  5:107287/1‑149 (MQ=255)                  ccACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATacac                                                                                                                          <  6:164015/145‑1 (MQ=255)                  ccACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGcc                                                                                                                      <  7:162922/149‑1 (MQ=255)                              aGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCaa                                                                                                           >  8:26925/1‑148 (MQ=255)                                           aaaTCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGaa                                                                                             <  7:26925/149‑1 (MQ=255)                                             aTCATTGAGCCGCAATCCGCTTACGGACATAAGTCACTGGGTTAGCCACCAATAATTCCTGTTGCCTCTTCTATTCGTATCGCGGTGAAGATGGCTACGGATGTTGCAATCATTACACTGCCGCTGACGCCAAAACGGTTATATGAaga                                                                                           <  6:107287/149‑1 (MQ=255)                                                     gCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGa                                                                                                                 <  7:16605/119‑1 (MQ=255)                                                     gCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGa                                                                                                                 >  8:16605/1‑119 (MQ=255)                                                     gCCGCAATCCGCATAAGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACg                                                                                                       <  3:99362/129‑1 (MQ=255)                                                     gCCGCAATCCGCATAAGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACg                                                                                                       >  4:99362/1‑129 (MQ=255)                                                        gCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGAc                                                                                                                >  3:34230/1‑117 (MQ=255)                                                        gCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGAc                                                                                                                <  4:34230/117‑1 (MQ=255)                                                         cAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCAACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTgg                                                                                >  8:3395/1‑148 (MQ=255)                                                                     ggACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGtt                                                                                                    >  8:30929/1‑116 (MQ=255)                                                                      gACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGa                                                                  <  2:15284/149‑1 (MQ=255)                                                                       aCATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAg                                                                 <  7:3395/149‑1 (MQ=255)                                                                                        aGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGa                                                >  2:179265/1‑149 (MQ=255)                                                                                           caccaATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGAttt                                             <  3:72277/149‑1 (MQ=255)                                                                                                   atTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGATTTTGcttct                                      <  1:179265/148‑1 (MQ=255)                                                                                                        tGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGATTTTGCTTCTTACCAt                                >  6:112518/1‑149 (MQ=255)                                                                                                             ccGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGATTTTGCTTCTTACCATcgcg                            <  5:112518/148‑1 (MQ=255)                                                                                                               gctgctATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGATTTTGCTTCTTACCATCGCgcag                         >  7:80796/1‑149 (MQ=255)                                                                                                                ctgctATTCGTAACGCGGTGAAGATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGATTTTGCTTCTTACCATCGCgcagc                        <  8:80796/149‑1 (MQ=255)                                                                                                                                      gATGGCTACCGATGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGATTTTGCTTCTTACCATCGCGCAGCAACCCTTGCCGATGCCATCAAc  >  8:120722/1‑149 (MQ=255)                                                                                                                                                 |                                                                                                                                          CGACCATGCCGGATCTGCCACAACTGGAAAGCGCGTTCGTCGAAATCAATGAGCCGCAATCCGCATACGGACATAAGTCACTGGGTGAGCCACCAATAATTCCTGTTGCCGCTGCTATTCGTAACGCGGTGAAGATGGCTACCGGTGTTGCAATCAATACACTGCCGCTGACGCCAAAACGGTTATATGAAGAGTTCCATCTGGCAGGATTGATTTGAGGATAACATCATGTTTGATTTTGCTTCTTACCATCGCGCAGCAACCCTTGCCGATGCCATCAAC  >  NC_000913/3002386‑3002667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑