New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 345066828 (0.770)7 (0.200) 7/228 2.1 20.4% coding (697/822 nt) rplB 50S ribosomal subunit protein L2
?NC_000913 = 3450673 28 (0.810)coding (692/822 nt) rplB 50S ribosomal subunit protein L2

ACGTGGCATGGCTTATCCTCTAAAATTATTTGCTACGGCGACGTACGATGAATTTATCAGTACGCTTGTTGCTGCGGGTCTTCTTACCTTTGGTCTGAACGCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTTCACCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3450518‑3450668
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaccCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGACCAAAGGTAAGAAGACCCGCA  <  NC_000913/3450673‑3450590
                                                                                                                                                                                                                                           
ACGTGGCATGGCTTATCCTCTAAAATTATTTGCTACGGCGACGTACGATGAATTTATCAGTACGCTTGTTGCTGCGGGTCTTCTTACCTTTGGTCTGAACGCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTTCACCACCA                                                                                        <  7:20077/149‑1
    GGCATGGCTTATCCTCTAAAATTATTTGCTACGGCGACGTACGATGAATTTATCAGTACGCTTGTTGCTGCGGGTCTTCTTACCTTTGGTCTGAACGCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTTCACCACCcacat                                                                                    >  7:166170/1‑144
                 CTCTAAAATTATTTGCTACGGCGACGTACGATGAATTTATCAGTACGCTTGTTGCTGCGGGTCTTCTTACCTTTGGTCTGAACGCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTT‑‑‑CACCACCCACATGGTGGTGGTGAAG                                                                    <  8:166170/149‑1
                                                                                     ACCTTTGGTCTGAACGCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTTCACCACCACCCACATGGTGGTGGTGAA                                                                     <  5:116393/83‑1
                                                                                     ACCTTTGGTCTGAACGCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTTCACCACCACCCACATGGTGGTGGTGAA                                                                     >  6:116393/1‑83
                                                                                                    GCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTTCACCACCACCCACATGGTGGTGG                                                                         >  7:102720/1‑64
                                                                                                    GCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTTCACCACCACCCACATGGTGGTGG                                                                         <  8:102720/64‑1
                                                                                                                                       GACCTTCACCACCACCCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGACCAAAGGTAAGAAGACCCGCA  >  7:124463/1‑100
                                                                                                                                       GACCTTCACCACCACCCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGACCAAAGGTAAGAAGACCCGCA  <  8:124463/100‑1
                                                                                                                                                   CACCCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGAC                      <  3:155367/68‑1
                                                                                                                                                   CACCCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGAC                      >  4:155367/1‑68
                                                                                                                                                      CCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGACCAAAGGTAAGAA          <  7:45882/77‑1
                                                                                                                                                      CCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGACCAAAGGTAAGAA          >  8:45882/1‑77
                                                                                                                                                                                                                                           
ACGTGGCATGGCTTATCCTCTAAAATTATTTGCTACGGCGACGTACGATGAATTTATCAGTACGCTTGTTGCTGCGGGTCTTCTTACCTTTGGTCTGAACGCCCCACGGAGTTACCGGGTGCTTACCAAAGTTACGACCTTCACCACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3450518‑3450668
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accaccCACATGGTGGTGGTGAAGGTCGTAACTTTGGTAAGCACCCGGTAACTCCGTGGGGCGTTCAGACCAAAGGTAAGAAGACCCGCA  <  NC_000913/3450673‑3450590

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.