Predicted mutation
evidence seq id position mutation freq annotation gene description
MC JC NC_000913 3,366,751 Δ1,271 bp 100% IS5‑mediated [yhcE]–[yhcG] [yhcE], yhcF, [yhcG]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3365662–3366754 3368021 1268–2360 29 [26] [0] 118 insH1–[yhcG] insH1,yhcE,yhcF,[yhcG]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3366750NA (NA)114 (1.320) 85/264 NT 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3368022 = 0 (0.000)coding (196/1128 nt) yhcG DUF1016 family protein in the PD‑(D/E)XK nuclease superfamily

Only 100 of 118 total aligned reads displayed.

CGACGGTATTATTCATCTGGTCGATAGCGCCCGGACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAAT  >  NC_000913/3367874‑3368170
                                                                                                                                                    |                                                                                                                                                    
cgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccc                                                                                                                                                      >  7:347199‑M2/149‑149 (MQ=255)
    acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAt                                                                                                                                                  <  5:226733‑M2/5‑1 (MQ=255)
     caagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAAt                                                                                                                                                  >  8:230065‑M2/144‑148 (MQ=255)
       agaaaatctcttttctggtctgacggcgcttactgctgaattcactggcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCaa                                                                                                                                               <  7:140327‑M2/8‑1 (MQ=255)
              ctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTa                                                                                                                                        >  5:124536‑M2/135‑149 (MQ=255)
               tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTAt                                                                                                                                       >  5:323557‑M2/134‑149 (MQ=255)
                cttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTAt                                                                                                                                       >  5:175715‑M2/133‑148 (MQ=255)
                        gtctgactgagcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaacactgttctatggctccagatgacaaacatgatctcatatcagggactagttcgcaccttccCTAATCAAGCGACTATCAAAgg                                                                                                                                 <  5:305339‑M2/22‑1 (MQ=255)
                        gtctgacgggggttactgctgaattcactgtcggctaagggaagttgttgactcatgatgaaccctgttctatggctccagaagacaaacatgttctcatatcagggacttgttcgcaccttccCTAATCCAGCGACTATCAAAGGAt                                                                                                                               <  4:312062‑M2/24‑1 (MQ=255)
                        gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGa                                                                                                                                <  4:183148‑M2/23‑1 (MQ=255)
                            gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATg                                                                                                                          >  7:207279‑M2/121‑149 (MQ=255)
                             acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatgagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                           <  7:22061‑M2/28‑1 (MQ=255)
                             acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                           <  5:124864‑M2/28‑1 (MQ=255)
                             acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                           <  5:285137‑M2/28‑1 (MQ=255)
                             acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                           <  2:233607‑M2/28‑1 (MQ=255)
                             acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTAt                                                                                                                           <  8:347199‑M2/28‑1 (MQ=255)
                             acggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatataagggacttgttcgccccttccCTAATCAAGCGACTATCAAAGGATTTATGt                                                                                                                         >  7:87595‑M2/120‑149 (MQ=255)
                                       ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGtat                                                                                                                <  1:54170‑M2/39‑1 (MQ=255)
                                        tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGtat                                                                                                                >  5:102841‑M2/109‑147 (MQ=255)
                                        tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGtat                                                                                                                >  3:348523‑M2/109‑147 (MQ=255)
                                          ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGc                                                                                                            <  3:61496‑M2/43‑1 (MQ=255)
                                             aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGt                                                                                                          <  6:250610‑M2/45‑1 (MQ=255)
                                             aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTg                                                                                                         >  5:279942‑M2/104‑149 (MQ=255)
                                             aattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTg                                                                                                         >  1:196911‑M2/104‑149 (MQ=255)
                                              attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcaggggcttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTgg                                                                                                        <  4:172723‑M2/47‑1 (MQ=255)
                                                  actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAgg                                                                                                                                 <  2:92060‑M2/22‑1 (MQ=255)
                                                  actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTaa                                                                                                                     <  5:98783‑M2/34‑1 (MQ=255)
                                                  actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTaa                                                                                                                     >  6:98783‑M2/99‑132 (MQ=255)
                                                  actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTtc                                                                                                    >  2:313180‑M2/99‑149 (MQ=255)
                                                    tgtcggcgaaggaaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGCTATAAGCGTGGGTtctc                                                                                                  >  4:129951‑M2/97‑149 (MQ=255)
                                                      tcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTg                                                                                                <  7:207225‑M2/55‑1 (MQ=255)
                                                            aaggtaagttgatgactcatgatgatccctgttctatggctccagatgacaaacatgatctcatatcagggccttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCGAAGGTATAAGCGTGGGTTCTCTgcaatc                                                                                           >  4:210593‑M2/89‑146 (MQ=255)
                                                              ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAAc                                                                                        <  8:207279‑M2/63‑1 (MQ=255)
                                                                   gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAc                                                                                    <  2:281449‑M2/67‑1 (MQ=255)
                                                                   gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTAc                                                                                    >  1:281449‑M2/82‑148 (MQ=255)
                                                                    ttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGc                                                                                  >  7:280863‑M2/81‑149 (MQ=255)
                                                                      gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGcc                                                                                 >  5:283982‑M2/79‑148 (MQ=255)
                                                                      gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGcc                                                                                 >  8:6889‑M2/79‑148 (MQ=255)
                                                                       atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCa                                                                                >  1:386052‑M2/78‑148 (MQ=255)
                                                                        tgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCaaa                                                                              >  1:54523‑M2/77‑149 (MQ=255)
                                                                           ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGa                                                                           <  4:32817‑M2/76‑1 (MQ=255)
                                                                            tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAg                                                                          >  4:26683‑M2/73‑149 (MQ=255)
                                                                            tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAg                                                                          >  3:90147‑M2/73‑149 (MQ=255)
                                                                              atgatgaaccctgttctatggctccctatgccaaacatgatctcagatcagggacttgttcgcaccttccCTAATCAAGCGCCTATCCGAGGATTTATGTCTAAGGTTTAAGCGTGGGTTCGCGGCAAAACACTTAAGCCAAATGAGGc                                                                        >  2:113812‑M2/71‑149 (MQ=255)
                                                                              atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAgg                                                                         <  7:6889‑M2/78‑1 (MQ=255)
                                                                              atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAg                                                                          <  7:105188‑M2/77‑1 (MQ=255)
                                                                              atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGc                                                                        >  2:198210‑M2/71‑149 (MQ=255)
                                                                                  tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCtttt                                                                    <  7:133286‑M2/83‑1 (MQ=255)
                                                                                   gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCttttt                                                                   >  5:9314‑M2/66‑149 (MQ=255)
                                                                                    aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCtttttt                                                                  <  5:304488‑M2/85‑1 (MQ=255)
                                                                                     accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCtttttt                                                                  <  6:175715‑M2/85‑1 (MQ=255)
                                                                                     accctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTa                                                                 >  7:83161‑M2/64‑149 (MQ=255)
                                                                                        ctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACct                                                              <  1:313180‑M2/89‑1 (MQ=255)
                                                                                          gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACctct                                                            >  8:288812‑M2/59‑149 (MQ=255)
                                                                                           ttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGGGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCtt                                                           >  8:108770‑M2/58‑149 (MQ=255)
                                                                                            tctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGCTTTAGGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCttt                                                          >  2:334202‑M2/57‑149 (MQ=255)
                                                                                              tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCttttt                                                        >  7:297324‑M2/55‑149 (MQ=255)
                                                                                              tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCttttt                                                        >  8:226981‑M2/55‑149 (MQ=255)
                                                                                              tatggctccagatgacaaacatgaactcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTATAAGGTATAATCGTAGGTTCTCTTCAAAAAACTTAAGCCAAATGAGGATTTATTACCTCttttt                                                        >  6:332860‑M2/55‑149 (MQ=255)
                                                                                                tggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTc                                                      <  3:236818‑M2/97‑1 (MQ=255)
                                                                                                 ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTc                                                      >  8:140230‑M2/52‑148 (MQ=255)
                                                                                                  gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCaa                                                    <  6:102841‑M2/99‑1 (MQ=255)
                                                                                                  gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCaa                                                    <  7:108770‑M2/99‑1 (MQ=255)
                                                                                                      cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACAt                                                 <  3:209119‑M2/102‑1 (MQ=255)
                                                                                                      cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATg                                                >  7:209215‑M2/47‑149 (MQ=255)
                                                                                                      cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATg                                                <  8:131685‑M2/103‑1 (MQ=255)
                                                                                                      cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATg                                                <  8:280863‑M2/103‑1 (MQ=255)
                                                                                                        gatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGtt                                              >  4:47857‑M2/45‑149 (MQ=255)
                                                                                                        gatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGtt                                              >  2:322638‑M2/45‑149 (MQ=255)
                                                                                                          tgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGa                                            <  6:279942‑M2/107‑1 (MQ=255)
                                                                                                           gacaaacatgatctcatatcagggacttgttctcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGa                                            >  1:385569‑M2/42‑148 (MQ=255)
                                                                                                           gacaaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGa                                            >  1:402231‑M2/42‑148 (MQ=255)
                                                                                                            acatacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGaa                                           <  6:9314‑M2/108‑1 (MQ=255)
                                                                                                            acaaacatgatctcatatcagggacctgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGaaa                                          <  7:188146‑M2/109‑1 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCaaa                                                                              <  7:308846‑M2/73‑1 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGaaa                                          >  4:131761‑M2/39‑147 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGaaa                                          <  3:131761‑M2/109‑1 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAAtt                                        >  1:267705‑M2/39‑149 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAAtt                                        >  1:94189‑M2/39‑149 (MQ=255)
                                                                                                              aaacatgatctcatatcagggacttgttcgcaccttccCAAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCaaa                                                                              >  8:308846‑M2/39‑111 (MQ=255)
                                                                                                               aacatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTc                                       <  3:26683‑M2/112‑1 (MQ=255)
                                                                                                                acatgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCa                                      >  5:1914‑M2/37‑149 (MQ=255)
                                                                                                                 catgatctaatatcagtgacttgttcgccacttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCAc                                     <  4:90147‑M2/114‑1 (MQ=255)
                                                                                                                   tgatctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCa                                   <  7:288812‑M2/116‑1 (MQ=255)
                                                                                                                     atctcatatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGa                                 >  8:139341‑M2/32‑149 (MQ=255)
                                                                                                                          atatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGa                                 <  2:94189‑M2/118‑1 (MQ=255)
                                                                                                                          atatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATg                            >  1:371143‑M2/27‑149 (MQ=255)
                                                                                                                           tatcagggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGGTTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGt                           <  2:372965‑M2/124‑1 (MQ=255)
                                                                                                                               agggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACaa                              <  1:88887‑M2/121‑1 (MQ=255)
                                                                                                                               agggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACaa                              >  2:88887‑M2/22‑142 (MQ=255)
                                                                                                                               agggacttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTgg                       <  8:209215‑M2/128‑1 (MQ=255)
                                                                                                                                    cttgttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAAt                  <  1:322638‑M2/133‑1 (MQ=255)
                                                                                                                                        ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCTAATTAac              >  2:109717‑M2/13‑149 (MQ=255)
                                                                                                                                        ttcgcaccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTaa               <  2:386052‑M2/136‑1 (MQ=255)
                                                                                                                                            caccttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCa          <  7:230065‑M2/141‑1 (MQ=255)
                                                                                                                                             accttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCAt         <  3:47857‑M2/142‑1 (MQ=255)
                                                                                                                                             accttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCAt         <  4:348523‑M2/142‑1 (MQ=255)
                                                                                                                                             accttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCAt         <  6:1914‑M2/142‑1 (MQ=255)
                                                                                                                                             accttccCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCCTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCAt         >  3:292297‑M2/8‑149 (MQ=255)
                                                                                                                                                    cTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAAt  >  5:276568/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CGACGGTATTATTCATCTGGTCGATAGCGCCCGGACGGAAACGGTACGTAGCGTTAACGCGTTAATGACCGCGACGTACCAGGAAATTGGCCGACGAATTGTCGAATTTGAACAAGGTGGCGAGGCCAGGGCTGCGTATGGTGCGCAGCTAATCAAGCGACTATCAAAGGATTTATGTCTAAGGTATAAGCGTGGGTTCTCTGCAAAAAACTTACGCCAAATGAGGCTTTTTTACCTCTTTTTTCAACATGTTGAAATTCACCAGACAATGTCTGGCGAATTAACACCATTGGGAAT  >  NC_000913/3367874‑3368170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑