Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,543,608 Δ1 bp :: IS186 (+) +6 bp :: Δ1 bp coding (494‑499/549 nt) fimA → major type 1 subunit fimbrin (pilin)

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2514274 =NA (NA)31 (0.880) 28/248 0.4 93.7% noncoding (2/1345 nt) IS186 repeat region
?NC_000913 = 4543613 2 (0.060)coding (499/549 nt) fimA major type 1 subunit fimbrin (pilin)
* ? NC_000913 = 2515616NA (NA)46 (1.310) 38/248 0.1 95.6% noncoding (1344/1345 nt) IS186 repeat region
?NC_000913 4543608 = 2 (0.060)coding (494/549 nt) fimA major type 1 subunit fimbrin (pilin)

GTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCTATTAGC  >  NC_000913/4543464‑4543756
                                                                                                                                                |                                                                                                                                                    
gTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGc                                                                                                                                                   >  1:130230/1‑148 (MQ=255)
    gagcttacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAAccc                                                                                                                                              >  3:105884‑M2/141‑149 (MQ=255)
    cgcAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcc                                                                                                                                               <  8:18200‑M2/148‑3 (MQ=255)
        acaaACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataa                                                                                                                                          >  2:130230‑M2/1‑142 (MQ=255)
         tacaggtggccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGt                                                                                                                                         >  5:88521‑M2/136‑149 (MQ=255)
                 gccattcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTaa                                                                                                                                 >  8:42232‑M2/128‑149 (MQ=255)
                     ttcgtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCg                                                                                                                             <  3:27869‑M2/26‑1 (MQ=255)
                       cAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCACCCCCGGGTGCTGCTAATGCGGa                                                                                                                           >  3:26465/1‑149 (MQ=255)
                        gtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGa                                                                                                                           <  7:95476‑M2/28‑1 (MQ=255)
                        gtgggacagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGa                                                                                                                           <  5:68380‑M2/28‑1 (MQ=255)
                          aTCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttg                                                                                                                        <  3:38206‑M2/149‑26 (MQ=255)
                              cagtatccctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGAcc                                                                                                                    <  6:120002‑M2/35‑1 (MQ=255)
                                     cctgacagcctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAg                                                                                                              <  6:88521‑M2/41‑1 (MQ=255)
                                     aaCGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgc                                                                                                             <  6:58457‑M2/149‑37 (MQ=255)
                                              ctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTAt                                                                                                     >  5:78875‑M2/99‑148 (MQ=255)
                                              ctacaaaacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATc                                                                                                    <  4:105884‑M2/51‑1 (MQ=255)
                                                  cTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgattt                                                                                                 <  1:173362‑M2/148‑49 (MQ=255)
                                                    aacgcaattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAAc                                                                                              >  6:5154‑M2/93‑149 (MQ=255)
                                                         aattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTAcc                                                                                         <  7:42232‑M2/62‑1 (MQ=255)
                                                         aattgaagaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTAcc                                                                                         <  8:146438‑M2/62‑1 (MQ=255)
                                                               gTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatga                                                                                    >  4:38206‑M2/1‑87 (MQ=255)
                                                               agaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCaa                                                                                                               <  6:37922‑M2/40‑1 (MQ=255)
                                                               agaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCaa                                                                                                               >  5:37922‑M2/82‑121 (MQ=255)
                                                               agaacgcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGtt                                                                                   >  4:132551‑M2/82‑149 (MQ=255)
                                                                  cGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaatta                                                                                <  1:43147‑M2/149‑66 (MQ=255)
                                                                    gcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAg                                                                                                              <  2:116119‑M2/41‑1 (MQ=255)
                                                                    gcgaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAg                                                                                                              >  1:116119‑M2/77‑117 (MQ=255)
                                                                      gaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGa                                                                             <  1:130167‑M2/74‑1 (MQ=255)
                                                                      gaggcatcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGa                                                                             >  2:130167‑M2/75‑148 (MQ=255)
                                                                         tAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctca                                                                          >  5:58457‑M2/1‑77 (MQ=255)
                                                                          catcgtcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCa                                                                        <  2:180651‑M2/79‑1 (MQ=255)
                                                                               tcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCa                                                                                                                <  8:16439‑M2/39‑1 (MQ=255)
                                                                               tcttaacgaggcaccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCa                                                                                                                >  7:16439‑M2/66‑104 (MQ=255)
                                                                                        ccTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatg                                                                                                     <  3:77062‑M2/106‑45 (MQ=255)
                                                                                        ccTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatg                                                                                                     >  4:77062‑M2/1‑62 (MQ=255)
                                                                                         cTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaa                                                         >  7:18200‑M2/1‑61 (MQ=255)
                                                                                          caccgaggcgtcgcattcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGc                                                        <  3:132551‑M2/95‑1 (MQ=255)
                                                                                                   gAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggccca                                               <  6:165816‑M2/149‑99 (MQ=255)
                                                                                                    aaCCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataa                                                                                                                                          <  5:46728‑M2/57‑8 (MQ=255)
                                                                                                    aaCCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataa                                                                                                                                          >  6:46728‑M2/1‑50 (MQ=255)
                                                                                                      ccAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgc                                                                                                                                      <  1:61189‑M2/59‑12 (MQ=255)
                                                                                                      ccAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgc                                                                                                                                      >  2:61189‑M2/1‑48 (MQ=255)
                                                                                                         ttcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAgg                                                                               <  8:40603‑M2/72‑1 (MQ=255)
                                                                                                         ttcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCa                                                                        >  5:141690‑M2/40‑118 (MQ=255)
                                                                                                         ttcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCa                                                                        <  6:141690‑M2/79‑1 (MQ=255)
                                                                                                         ttcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGa                                          >  3:76378‑M2/40‑148 (MQ=255)
                                                                                                         ttcttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATAAATAACCTACCCAGGTTCAgg                                                                               >  7:40603‑M2/40‑111 (MQ=255)
                                                                                                         aTACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattgg                                         <  7:5694‑M2/149‑105 (MQ=255)
                                                                                                          tACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtg                                                                                                                      <  4:14354‑M2/71‑28 (MQ=255)
                                                                                                            ttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGt                                                                                                                                         >  2:26278‑M2/37‑50 (MQ=255)
                                                                                                            ttcagatggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGt                                                                                                                                         <  1:26278‑M2/14‑1 (MQ=255)
                                                                                                            ccATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATaa                                       <  4:26465/148‑1 (MQ=255)
                                                                                                             cATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtca                                                             <  4:137694‑M2/125‑85 (MQ=255)
                                                                                                             cATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtca                                                             >  3:137694‑M2/1‑41 (MQ=255)
                                                                                                                 atggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGAt                                         >  6:95360‑M2/32‑141 (MQ=255)
                                                                                                                 atggttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGAt                                         <  5:95360‑M2/110‑1 (MQ=255)
                                                                                                                   gTTCCAGGCGGGTTATTTTGCAACCGGGGCCGCAAcgcagatgcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccg                                 <  4:42286‑M2/147‑113 (MQ=255)
                                                                                                                     ttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGAt                             <  4:76378‑M2/122‑1 (MQ=255)
                                                                                                                     ttcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGAt                             >  4:3128‑M2/28‑149 (MQ=255)
                                                                                                                      tcaacccttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATaa                                 >  1:196376‑M2/27‑144 (MQ=255)
                                                                                                                          gcgcGTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgg                        >  8:5694‑M2/1‑28 (MQ=255)
                                                                                                                           cgcgTTATTTTGCAACCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactgga                       >  2:173362‑M2/1‑27 (MQ=255)
                                                                                                                            cttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATaaaa                                     <  7:99726‑M2/114‑1 (MQ=255)
                                                                                                                            cttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATaaaa                                     >  8:99726‑M2/21‑134 (MQ=255)
                                                                                                                             ttaagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAgg                      >  8:74485‑M2/20‑148 (MQ=255)
                                                                                                                              taagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCTGGGATGCCCACCCTTGTGCGATaaa                                      <  7:93776‑M2/113‑1 (MQ=255)
                                                                                                                              taagttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATaaa                                      >  8:93776‑M2/19‑131 (MQ=255)
                                                                                                                                agttagcgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAag                   <  6:78875‑M2/132‑1 (MQ=255)
                                                                                                                                      cgcttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGattat            <  5:5154‑M2/139‑1 (MQ=255)
                                                                                                                                        cttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGat               <  1:34555‑M2/136‑1 (MQ=255)
                                                                                                                                        cttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGat               >  2:34555‑M2/9‑144 (MQ=255)
                                                                                                                                        cttatgggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTAttt          >  8:40755‑M2/9‑149 (MQ=255)
                                                                                                                                        aaCCGGGGCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacg           <  2:92329‑M2/148‑135 (MQ=255)
                                                                                                                                              ggCCGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgcc    <  1:197007‑M2/149‑142 (MQ=255)
                                                                                                                                              ggCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCTATTa    <  6:20946‑M2/147‑1 (MQ=255)
                                                                                                                                               gCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGt                                                                                    >  7:138148‑M2/2‑68 (MQ=255)
                                                                                                                                               gCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGt                                                                                    <  8:138148‑M2/67‑1 (MQ=255)
                                                                                                                                                ccGCAAcccataagcgctaacttaagggttgtggtattacgcctgatatgatttaacgtgccgatgaattactctcacgataactggtcagcaattctggcccatattggtaagcccgaagaactggatacttcggcacgtaatgccgg  >  2:197007‑M2/1‑6 (MQ=255)
                                                                                                                                                ccGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCTATTAGc  <  7:40755/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
GTAGCGCAACAAACGTTGGTGTGCAGATCCTGGACAGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAGGGACGTCATTACGGGCAGGGATGCCCACCCTTGTGCGATAAAAATAACGATGAAAAGGAAGAGATTATTTCTATTAGC  >  NC_000913/4543464‑4543756

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.