| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 894,627 | A→G | 5.2% | M282V (ATG→GTG) | potF → | putrescine ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 894,627 | 0 | A | G | 5.2% | 240.5 / 2.7 | 77 | M282V (ATG→GTG) | potF | putrescine ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base A (33/40); new base G (2/2); total (35/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
CCTGGCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCGGAAGTCCGTGA > NC_000913/894479‑894775 | ccTGGCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCa < 6:179760/149‑1 (MQ=255)ccTGGCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCa < 2:272132/149‑1 (MQ=255) cTGGCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCGGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCAt < 8:379918/149‑1 (MQ=255) cTGGCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCAt > 1:169942/1‑149 (MQ=255) gCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGcc > 1:118292/1‑149 (MQ=255) aaCGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGc < 7:371258/149‑1 (MQ=255) cGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCAt > 6:194916/1‑141 (MQ=255) cGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCAt < 5:194916/141‑1 (MQ=255) atTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCa > 3:178026/1‑148 (MQ=255) attGCGGCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGGCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCaa < 7:162594/147‑1 (MQ=255) gCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCaaaaa < 1:156896/148‑1 (MQ=255) gTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACa > 7:246470/1‑148 (MQ=255) tCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCa > 8:58693/1‑126 (MQ=255) tCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCa < 7:58693/126‑1 (MQ=255) tCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACaaa < 2:169942/149‑1 (MQ=255) gCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGa < 5:129508/149‑1 (MQ=255) gCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCAGATGCCAAAAACAAAGa < 2:277371/149‑1 (MQ=255) tCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCTCGAATGAATCGAAGAATTGAGTGAATGTCTCGATCTCGATTCCAAAATAAGGGGCGATGGAGTTCTTTGATGTATTAGCCATGCCTGCGGATGCCAAAAACAAAGACGaa < 6:291343/149‑1 (MQ=255) tCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGa < 6:25385/148‑1 (MQ=255) cGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGc < 1:102479/126‑1 (MQ=255) cGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGc > 2:102479/1‑126 (MQ=255) ggCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGc < 1:345724/149‑1 (MQ=255) ggCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTAt < 8:246470/148‑1 (MQ=255) gTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGTCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTc < 1:234660/149‑1 (MQ=255) gTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTc > 4:83651/1‑149 (MQ=255) gTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGGTCTTTGATGTATTCGACATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTc > 3:305005/1‑149 (MQ=255) tGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTcc > 1:149692/1‑149 (MQ=255) tGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGAGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTATTTGATGTATTCGCCATGCCTGCCGATGCAAAAAACAAATACGAATCCTATCATTTCCTGAAtt > 4:24649/1‑148 (MQ=255) gCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTAcc > 5:146130/1‑149 (MQ=255) gCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACctgct > 8:250436/1‑149 (MQ=255) tCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTgcg > 3:186249/1‑149 (MQ=255) ccGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCGATCAGTTCCTGAATTACCTGCTGCGCCCg > 1:294611/1‑148 (MQ=255) ggaagCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGtagtag < 4:281429/149‑1 (MQ=255) gaagCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAgc < 4:132122/149‑1 (MQ=255) gaagaaTGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCata < 7:250436/149‑1 (MQ=255) gaagaaTGGCGTGAATGTCTCGTTATCGATTCAAAAAGAAGTGGCGATGGCGTTCTTTGATGTATTCGCCATGCATGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTACTGAATTACCTGATGCGCCAGGATGTAGTAGCGCata > 6:109142/1‑149 (MQ=255) agaaTGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCGTGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATAtt > 3:223078/1‑149 (MQ=255) agaaTGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCGTGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATAtt > 3:227864/1‑149 (MQ=255) aaTGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTc < 2:149692/149‑1 (MQ=255) tcgggAATGTCTCGTTCTCGATTACAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCGTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGa < 6:321712/144‑1 (MQ=255) gCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGa < 6:157423/148‑1 (MQ=255) gTGAAGGTCTCTTTCTCTATTACAAAAGCAGGTGCGCCGCCTTTAATTGATTTATTCGCAATTCTTTCGTATTCGAAAATCATAGTCTATGCCTATAACTTTCTGATTTTCAAGATGCGCCCGGATGTAGTAGCGCATATTTCCGACCa < 2:78882/149‑1 (MQ=255) tGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCAt < 4:178026/149‑1 (MQ=255) aaTGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTAc < 3:142827/108‑1 (MQ=255) aaTGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTAc > 4:142827/1‑108 (MQ=255) aaTGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGGTCTTTGATGTATTCGCCGTGCCGGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCAtgt < 4:227864/149‑1 (MQ=255) aTGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCGTGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCAtgt < 4:223078/148‑1 (MQ=255) aTGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCAtgtg < 3:83651/149‑1 (MQ=255) tGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCAGTCCTGCGGATGCCAAAAACAAAGCCGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGAcccttggt > 5:100649/1‑143 (MQ=255) tctcGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGTAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGTATGTAGTAGCGCATATTTCCGACCATGTGTTc < 6:316977/149‑1 (MQ=255) tctcGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGtt < 4:186249/148‑1 (MQ=255) gtgctcGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGACGCCTATCAGTTCCTGAATTACCTGCGGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTGCTa < 1:236975/144‑1 (MQ=255) ctcGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGcc > 4:205447/1‑148 (MQ=255) tcGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGtt > 4:262622/1‑140 (MQ=255) tcGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGtt < 3:262622/140‑1 (MQ=255) gATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATgtagta > 4:58472/1‑115 (MQ=255) gATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATgtagta < 3:58472/115‑1 (MQ=255) gATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGAcc > 7:213087/1‑131 (MQ=255) gATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGAcc < 8:213087/131‑1 (MQ=255) gATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACg > 5:198459/1‑149 (MQ=255) cAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCaa < 1:348036/148‑1 (MQ=255) cAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCaa > 1:68979/1‑148 (MQ=255) cAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAAt < 2:118292/149‑1 (MQ=255) aaaaGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGACGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAAt > 8:189015/1‑148 (MQ=255) aaaaGAAGGGGCGATGGCGTTCTTTGATGAATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACAATGTGTTCTATGCCAACGCCAAt > 4:103535/1‑148 (MQ=255) aaaGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGtt < 1:38256/131‑1 (MQ=255) aaaGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGtt > 2:38256/1‑131 (MQ=255) aattggCTATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGTATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAagca < 3:24649/145‑1 (MQ=255) aagGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAagca < 6:146130/149‑1 (MQ=255) gggCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAATACCAAAGACGAAGCGGATCAGTTCCTGAATTACCTGCAGAGCCCCGAGGTAGTAGAGCATATTTCCGAACATGTGTTCTAGGCACAAGCCAATAACTCAGcc > 6:189767/1‑149 (MQ=255) aTGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATTCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTATATGCCAACGCCAATAAAGCGGCCAcgcc > 4:187645/1‑149 (MQ=255) aTGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCAcgcc > 3:266848/1‑149 (MQ=255) tctttCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATTACAACGCCAATAAAGCAGCCACGCCGCt < 5:109142/146‑1 (MQ=255) gTTCTTTGATGTATTCGCCATGCCTGATGATGCCAAAAACAAAGACGAAGCATATCAGTTACTGACTTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCAGGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTgg < 6:100649/149‑1 (MQ=255) tttGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATgtgt < 1:81044/109‑1 (MQ=255) tttGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATgtgt > 2:81044/1‑109 (MQ=255) aTTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCAAACTCCAATAAAGCAGCCACGCCGCTGGTGAGTGCGGAAg > 6:134680/1‑149 (MQ=255) ttCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCg > 5:182279/1‑144 (MQ=255) ttCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCg < 6:182279/144‑1 (MQ=255) ttCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCGGAAGt > 2:321378/1‑149 (MQ=255) gCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCGGAAGTcc < 6:198459/148‑1 (MQ=255) aTGCCTGCGGATGCCAAAAACAAAGACTAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCGGAAGTCCGTga < 3:205447/149‑1 (MQ=255) | CCTGGCAAACGGCGATATTTGCGTCGCTATCGGCTGGGCAGGTGATGTCTGGCAGGCGTCAAACCGCGCGAAGGAAGCGAAGAATGGCGTGAATGTCTCGTTCTCGATTCCAAAAGAAGGGGCGATGGCGTTCTTTGATGTATTCGCCATGCCTGCGGATGCCAAAAACAAAGACGAAGCCTATCAGTTCCTGAATTACCTGCTGCGCCCGGATGTAGTAGCGCATATTTCCGACCATGTGTTCTATGCCAACGCCAATAAAGCAGCCACGCCGCTGGTGAGTGCGGAAGTCCGTGA > NC_000913/894479‑894775 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |