BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3876111	95 (1.150)	5 (0.070)	5/244	NT	5.4%	intergenic (+17/+29)	yidX/yidA	putative lipoprotein/sugar phosphate phosphatase
*	?	NC_000913	= 3876122	88 (1.160)	5 (0.070)	5/244	NT	5.4%	intergenic (+28/+18)	yidX/yidA	putative lipoprotein/sugar phosphate phosphatase

Only 100 of 119 total aligned reads displayed.

TTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCCACACCGACGCC  >  NC_000913/3875968‑3876259

  aTGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGttt                                                                                                                                                <  5:364024/148‑1 (MQ=255)

   tGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTa                                                                                                                                               <  2:119890/148‑1 (MQ=255)

   tGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTAt                                                                                                                                              <  8:143030/149‑1 (MQ=255)

   tGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTAt                                                                                                                                              <  8:14116/149‑1 (MQ=255)

     aaTACTATTCACCCAGAGGCATTCCGGATGGTGTATCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCCCTGCAATTTCTGGTTCTATATGCAGTAAACCAATAATCAGGAAGCGGGCAAACGCGTTTATGc                                                                                                                                            >  3:262559/1‑149 (MQ=255)

       tACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTg                                                                                                                                          >  3:200723‑M2/1‑148 (MQ=255)

         cTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACgcataaacgcgttt                                                                                                                                        >  3:301672‑M1/1‑135 (MQ=255)

            ttCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTgtttgc                                                                                                                                     <  2:131350‑M2/149‑7 (MQ=255)

             tCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTgtttgcc                                                                                                                                    <  2:171611‑M2/149‑8 (MQ=255)

             tCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTgtttgcc                                                                                                                                    <  4:302265‑M2/149‑8 (MQ=255)

               aCCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACagcataaacgcgtttgccc                                                                                                                                   <  5:186017‑M1/148‑20 (MQ=255)

               aCCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTgtttgcccg                                                                                                                                  <  2:346482‑M2/149‑10 (MQ=255)

                 ccAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTgcccgcc                                                                                                                                >  1:331222/1‑149 (MQ=255)

                 ccAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTgcccgcc                                                                                                                                >  4:105112/1‑149 (MQ=255)

                 ccAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTgcccgcc                                                                                                                                >  3:229135/1‑149 (MQ=255)

                 ccAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTgcccgcc                                                                                                                                >  8:34575/1‑149 (MQ=255)

                    gagGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCATTTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCAGCCca                                                                                                                              >  7:215489/1‑148 (MQ=255)

                     agGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCcaca                                                                                                                            <  8:177896/149‑1 (MQ=255)

                             cGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAAtt                                                                                                                    >  1:219223/1‑149 (MQ=255)

                             cGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAAtt                                                                                                                    <  8:262019/149‑1 (MQ=255)

                             cGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAAt                                                                                                                     <  5:55890/148‑1 (MQ=255)

                                aTGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAg                                                                                                                 >  1:276706/1‑149 (MQ=255)

                                  ggTGTTTCCGAAGCATTACTGCCAGTGACTGTTACGCTTGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGc                                                                                                                <  6:279304/148‑1 (MQ=255)

                                   gtgtTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGcac                                                                                                              <  8:87013/149‑1 (MQ=255)

                                        tCCGCAGCATTAATGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATAc                                                                                                          <  5:134549/148‑1 (MQ=255)

                                         ccGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACt                                                                                                         <  1:222328/148‑1 (MQ=255)

                                          cGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATa                                                                                                           <  2:204884/145‑1 (MQ=255)

                                          cGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAAATCAGCACATAcag                                                                                                        >  1:204884/1‑146 (MQ=255)

                                            cagcaTTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTtctc                                                                                                     <  3:302265/149‑1 (MQ=255)

                                               caTTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCaa                                                                                                   >  6:95875/1‑148 (MQ=255)

                                               caTTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTAAAGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCaa                                                                                                   >  1:146226/1‑148 (MQ=255)

                                                aTTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATa                                                                                                 <  4:297700/149‑1 (MQ=255)

                                                 ttACTGCCTGTGACTGTTACGCTGGACATCATTACTTCACCGCTGAAATTTCTGGTTGTTTATGCAGTAAACCAATAATCAGTAAGCGGGCAAACTCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAg                                                                                                <  8:215489/149‑1 (MQ=255)

                                                     tGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCaaa                                                                                            >  3:350517/1‑149 (MQ=255)

                                                       ccAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacg                                                                                          >  2:149184/1‑149 (MQ=255)

                                                        cAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgc                                                                                         <  5:90235/149‑1 (MQ=255)

                                                           tGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgccac                                                                                      >  5:15978/1‑149 (MQ=255)

                                                                 ttACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATc                                                                                >  2:88065/1‑149 (MQ=255)

                                                                      cTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCaa                                                                           <  1:346482/149‑1 (MQ=255)

                                                                       gggACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAg                                                                          <  1:213295/148‑1 (MQ=255)

                                                                            atcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACagcataaacgcgtttgcccgct                                                                                                                                >  1:332258‑M1/1‑68 (MQ=255)

                                                                            atcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgatgtc                                                                      <  4:301672‑M2/149‑71 (MQ=255)

                                                                            atcatTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGt                                                                        >  2:353955/1‑146 (MQ=255)

                                                                             tcatTACTGCACCGCTGCACTTTCTGGTTGAATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGa                                                                    <  5:262203/149‑1 (MQ=255)

                                                                               atTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGAtt                                                                  >  1:209387/1‑149 (MQ=255)

                                                                               atTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGAtt                                                                  >  8:333402/1‑149 (MQ=255)

                                                                                ttACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTTATTCCGCACATACTTCTCAATAGCAAACGCGACGCCATCTTCAAGGTTAGCttt                                                                 >  4:105994/1‑149 (MQ=255)

                                                                                  aCTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTg                                                                <  7:34575/148‑1 (MQ=255)

                                                                                   cTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTgg                                                               <  2:107493/148‑1 (MQ=255)

                                                                                    tGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGt                                                              >  5:238345/1‑148 (MQ=255)

                                                                                      cACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGa                                                            >  6:309194/1‑148 (MQ=255)

                                                                                       aCCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGAc                                                           >  6:40058/1‑148 (MQ=255)

                                                                                       aCCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACa                                                          <  2:219223/149‑1 (MQ=255)

                                                                                        ccGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACaa                                                         <  1:131350/149‑1 (MQ=255)

                                                                                            tGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGtt                                                     >  2:319148/1‑149 (MQ=255)

                                                                                              cAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCg                                                   >  7:261997/1‑149 (MQ=255)

                                                                                              cAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCg                                                   >  5:205577/1‑149 (MQ=255)

                                                                                                 tttCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCa                                                >  3:220494/1‑149 (MQ=255)

                                                                                                     tGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCActtc                                            >  6:128047/1‑149 (MQ=255)

                                                                                                      ggTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCAACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGGCActtct                                           >  1:344503/1‑149 (MQ=255)

                                                                                                        ttGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCttt                                         <  1:171611/149‑1 (MQ=255)

                                                                                                        ttGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCttt                                         <  6:15978/149‑1 (MQ=255)

                                                                                                          ttttatGCAGTAAACCAATAATCAGTAATGTGGCAAACGCGTTTATGCTGTTTGCACTCCCACATATTAATTAAGCACATTCTTCTCAATAGCAAACGCATCGCCATGTTCTAGGTTAGATTTTGTGAGAAAGTTCGGCACTTCTTTc                                        <  2:29252/145‑1 (MQ=255)

                                                                                                           tataTGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCa                                       <  5:95875/148‑1 (MQ=255)

                                                                                                           tataTGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCa                                       <  7:316591/148‑1 (MQ=255)

                                                                                                              atGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTg                                    >  6:74532/1‑148 (MQ=255)

                                                                                                               tGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTg                                    >  7:79660/1‑147 (MQ=255)

                                                                                                                 cAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAg                                 <  1:98202/148‑1 (MQ=255)

                                                                                                                 cAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAg                                 <  8:261997/148‑1 (MQ=255)

                                                                                                                  aGTAACCCAATAATCAGTACCCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACCGATTAATTCAGCACATACTTCTCAATAGCAACCGCCACGCCCTCTTCAAGGTAAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGa                               <  4:35065/149‑1 (MQ=255)

                                                                                                                   gTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGaa                              <  7:324625/149‑1 (MQ=255)

                                                                                                                   gTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGaa                              <  2:276706/149‑1 (MQ=255)

                                                                                                                    tAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGaa                              >  1:141338/1‑148 (MQ=255)

                                                                                                                    tAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGaa                              >  2:111312/1‑148 (MQ=255)

                                                                                                                      aaCCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAg                           >  4:216280/1‑149 (MQ=255)

                                                                                                                       aCCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCATACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGc                          <  8:207132/149‑1 (MQ=255)

                                                                                                                       aCCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGc                          <  6:343819/149‑1 (MQ=255)

                                                                                                                         cAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTTAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGt                        >  5:68592/1‑149 (MQ=255)

                                                                                                                         cAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGt                        >  8:378291/1‑149 (MQ=255)

                                                                                                                          aataatCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGt                        >  4:133516/1‑148 (MQ=255)

                                                                                                                          aataatCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGt                        >  2:178519/1‑148 (MQ=255)

                                                                                                                           ataatCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCa                                                                                                                  >  1:14028/1‑57 (MQ=255)

                                                                                                                           ataatCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGca                                                                                                               >  6:1212/1‑60 (MQ=255)

                                                                                                                           ataatCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGAGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTa                      <  7:106437/149‑1 (MQ=255)

                                                                                                                            taatCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTAt                     >  3:237388/1‑149 (MQ=255)

                                                                                                                              atCAGTAAGCGGGCAAACGCTTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgcca                                                                                       <  7:61825/81‑1 (MQ=255)

                                                                                                                              atCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAacgcca                                                                                       >  8:61825/1‑81 (MQ=255)

                                                                                                                                   tAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGc              <  2:331222/149‑1 (MQ=255)

                                                                                                                                     aGCGGGCAAACGCGTTTATGCTgtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgat                                                                       >  1:332258‑M2/1‑22 (MQ=255)

                                                                                                                                     aGCGGGCAAACGCGTTTATGCTgtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgat                                                                       <  2:332258‑M2/90‑69 (MQ=255)

                                                                                                                                       cGGGCAAACagcataaacgcgtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgatgtccagcgtaacagtcactggcagtaatgctgcggaaacaccatccggaatgcctctgggt          <  2:346482‑M1/149‑141 (MQ=255)

                                                                                                                                        gggCAAACGCGTTTATGCTgtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgatgtccagcgtaacagtcactggcagtaatgctgcggaaacaccatccggaatgcctctgggt          <  5:186017‑M2/148‑130 (MQ=255)

                                                                                                                                         ggCAAACagcataaacgcgtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgatgtccagcgtaacagtcactggcagtaatgctgcggaaacaccatccggaatgcctctgggtga        <  2:171611‑M1/149‑143 (MQ=255)

                                                                                                                                         ggCAAACagcataaacgcgtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgatgtccagcgtaacagtcactggcagtaatgctgcggaaacaccatccggaatgcctctgggtga        <  4:302265‑M1/149‑143 (MQ=255)

                                                                                                                                          gCAAACagcataaacgcgtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgatgtccagcgtaacagtcactggcagtaatgctgcggaaacaccatccggaatgcctctgggtgaa       <  2:131350‑M1/149‑144 (MQ=255)

                                                                                                                                            aaaCGCGTTTATGCtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgatgtccagcgtaacagtcactggcagtaatgctgcggaaacaccatccggaatgcctctgggtgaatag      >  3:301672‑M2/1‑15 (MQ=255)

                                                                                                                                             aaCGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCttt                                         >  3:332200/1‑112 (MQ=255)

                                                                                                                                             aaCGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCttt                                         <  4:332200/112‑1 (MQ=255)

                                                                                                                                              aCGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCCAGGTTAGCTTTGGTGACAAAGTTCGACACTTCTTTAACTGATGGAATAGCGTTATCCATCGCCACACcgccgc   >  5:307925/1‑149 (MQ=255)

                                                                                                                                               cagcataaacgcgtttgcccgcttactgattattggtttactgcatatacaaccagaaattgcagcggtgcagtaatgatgtccagcgtaacagtcactggcagtaatgctgcggaaacaccatccggaatgcctctgggtgaatagta  >  3:200723‑M1/1‑1 (MQ=255)

TTATGAATACTATTCACCCAGAGGCATTCCGGATGGTGTTTCCGCAGCATTACTGCCAGTGACTGTTACGCTGGACATCATTACTGCACCGCTGCAATTTCTGGTTGTATATGCAGTAAACCAATAATCAGTAAGCGGGCAAACGCGTTTATGCTGTTTGCCCGCCCACAGATTAATTCAGCACATACTTCTCAATAGCAAACGCCACGCCATCTTCAAGGTTAGATTTGGTGACAAAGTTCGCCACTTCTTTCACTGAAGGAATAGCGTTATCCATCGCCACACCGACGCC  >  NC_000913/3875968‑3876259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.