| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 284258 = | 93 (1.020) | 3 (0.030) | 3/250 | NT | 3.9% | coding (1058/1968 nt) | yagF | CP4‑6 prophage; dehydratase family protein |
| ? | NC_000913 | 284307 = | 60 (0.690) | coding (1107/1968 nt) | yagF | CP4‑6 prophage; dehydratase family protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCGGCGCTCGGACGCCTGCCACCATTCAAGGTTCTCGCCCACCGTCTGGCCGGTCACGGTCATGGCGTCCAGATGCAGCAGGCCGAGGTCGCGCAGGTGGAGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/284409‑284258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgatGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCG > NC_000913/284307‑284454 CCGGCGCTCGGACGCCTGCCACCATTCAAGGTTCTCGCCCACCGTCTGGCCGGTCACGGTCATGGCGTCCAGATGCAGCAGGCCGAGGTCGCGCAGGTGGAGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGGT < 2:384299/149‑1CCGGCGCTCGGACGCCTGCCACCATTCAAGGTTCTCGCCCACCGTCTGGCCGGTCACGGGCATGGCGTCCAGATGCAGCAGGCCGAGGTCGCGCAGGTGGAGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGGT < 1:86785/149‑1 GGCGCTCGGACGCCTGCCACCATTCAAGGTTCTCGCCCACCGTCTGGCCGGTCACGGTCATGGCGTCCAGATGCAGCAGGCCGAGGTCGCGCAGGTGGAGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGGTGA < 5:342335/149‑1 ATTCAAGGTTCTCGCCCACCGTCTGGCCGGTCACGGTCATGGCGGCCAGATGCAGCAGGCCGAGGTCGCGCAGGTGGCGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGG > 3:323324/1‑124 GATGCAGCAGGCCGAGGTCGCGCAGGTGGAGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGG < 3:282557/77‑1 GATGCAGCAGGCCGAGGTCGCGCAGGTGGAGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGG > 4:282557/1‑77 AGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAG > 7:336262/1‑149 TCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGGTGATGCTCCACCTGCGCGACCTTGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCC > 2:357443/1‑149 GCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGGTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCT < 8:336262/149‑1 GTGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTA > 3:390330/1‑147 TGATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAG < 4:390330/149‑1 GATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGC > 1:203536/1‑149 GATGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGC > 6:16362/1‑149 TGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCG > 4:116461/1‑149 CCGGCGCTCGGACGCCTGCCACCATTCAAGGTTCTCGCCCACCGTCTGGCCGGTCACGGTCATGGCGTCCAGATGCAGCAGGCCGAGGTCGCGCAGGTGGAGCATCACCTCCGGCACGCCGCCCGCGAGGAAGGCGCGCACGGTCGGGTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/284409‑284258‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtgatGCTCCACCTGCGCGACCTCGGCCTGCTGCATCTGGACGCCATGACCGTGACCGGCCAGACGGTGGGCGAGAACCTTGAATGGTGGCAGGCGTCCGAGCGCCGGGCGCGCTTCCGCCAGTGCCTGCGCGAGCAGGACGGCGTAGAGCCG > NC_000913/284307‑284454 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |