New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 940750 | 102 (1.200) | 4 (0.050) | 4/264 | 8.7 | 4.1% | intergenic (+30/‑209) | serS/dmsA | seryl‑tRNA synthetase/dimethyl sulfoxide reductase, anaerobic, subunit A |
? | NC_000913 | = 940754 | 93 (1.170) | intergenic (+34/‑205) | serS/dmsA | seryl‑tRNA synthetase/dimethyl sulfoxide reductase, anaerobic, subunit A | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GGTTCTGGTCTGGCTGTTGGTCGTACGCTGGTTGCAGTAATGGAAAACTATCAGCAGGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAAAAAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/940595‑940750 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagcgccCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTCCAGTCCGTTCATATACGGACGCAGAACTTCTGGTACTTCAATACGACCATCAGCCTGCTGATAGTTTTCCATTACTGCAACCAGCGTACGACCAACAGC < NC_000913/940754‑940607 GGTTCTGGTCTGGCTGTTGGTCGTACGCTGGTTGCAGTAATGGAAAACTATCAGCAGGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAA > 8:168015/1‑148 GTTCTGGTCTGGCTGTTGGTCGTACGCTGGTTGCAGTAATGGAAAACTATCAGCAGGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAAA > 5:164485/1‑148 GTCTGGCTGTTGGTCGTACGCTGGTTGCAGTAATGGAAAACTATCAGCAGGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAAAAAGCGCC > 3:20090/1‑149 TCGTACGCTGGTTGCAGTAATGGAAAACTATCAGCAGGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAAAAAGCGCCCGCAGGCGCTTTT < 2:194641/149‑1 GGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAAAAAGCGCCCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTC < 8:117037/149‑1 GTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAAAAAGCGCCCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATT > 3:243734/1‑108 GTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAAAAAGCGCCCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATT < 4:243734/108‑1 GCGCCCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTCCAGTCCGTTCATATACGGACGCAGAACTTCTGGTACTTCAATACGACCATCAGCCTGCTGATAGTTTTCCATTACTGCAACCAGCGTACG < 5:173750/144‑1 GCGCCCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTCCAGTCCGTTCATATACGGACGCAGAACTTCTGGTACTTCAATACGACCATCAGCCTGCTGATAGTTTTCCATTACTGCAACCAGCGTACG > 6:173750/1‑144 CCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTCCAGTCCGTTCATATACGGACGCAGAACTTCTGGTACTTCAATACGACCATCAGCCTGCTGATAGTTTTCCATTACTGCAACCAGCGTACGACCAACAGC < 2:126900/149‑1 CCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTCCAGTCCGTTCATATACGGACGCAGAACTTCTGGTACTTCAATACGACCATCAGCCTGCTGATAGTTTTCCATTACTGCAACCAGCGTACGACCAACAGC < 2:127443/149‑1 CCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTCCAGTCCGTTCATATACGGACGCAGAACTTCTGGTACTTCAATACGACCATCAGCCTGCTGATAGTTTTCCATTACTGCAACCAGCGTACGACCAACAGC > 3:237208/1‑149 CCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTCCAGTCCGTTCATATACGGACGCAGAACTTCTGGTACTTCAATACGACCATCAGCCTGCTGATAGTTTTCCATTACTGCAACCAGCGTACGACCAACAGC < 6:290943/149‑1 GGTTCTGGTCTGGCTGTTGGTCGTACGCTGGTTGCAGTAATGGAAAACTATCAGCAGGCTGATGGTCGTATTGAAGTACCAGAAGTTCTGCGTCCGTATATGAACGGACTGGAATATATTGGCTAATACCCAATTTTTCTGAATCTAAAAAGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/940595‑940750 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaagcgccCGCAGGCGCTTTTTAGATTCAGAAAAATTGGGTATTAGCCAATATATTCCAGTCCGTTCATATACGGACGCAGAACTTCTGGTACTTCAATACGACCATCAGCCTGCTGATAGTTTTCCATTACTGCAACCAGCGTACGACCAACAGC < NC_000913/940754‑940607 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |