Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 1,945,340 | C→T | 6.6% | R6H (CGT→CAT) | ruvB ← | ATP‑dependent DNA helicase, component of RuvABC resolvasome |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,945,340 | 0 | C | T | 6.6% | 186.1 / 2.7 | 60 | R6H (CGT→CAT) | ruvB | ATP‑dependent DNA helicase, component of RuvABC resolvasome |
Reads supporting (aligned to +/- strand): ref base C (30/26); new base T (2/2); total (32/28) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.23e-01 |
GAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAGCGCCACCAGCGCGG > NC_000913/1945192‑1945483 | gAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGAc < 2:245346/149‑1 (MQ=255) aGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACg < 4:294507/149‑1 (MQ=255) tCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCtt > 2:61326/1‑149 (MQ=255) gctgctTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCttt < 4:232477/148‑1 (MQ=255) gctTTGATGAATATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAAATTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTCCCGGCAGAAGTCAGACGGTCTGCTTCAATCATCCTTTACCt > 2:155486/1‑149 (MQ=255) cATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAg > 5:143573/1‑149 (MQ=255) aTCTGTGAACGAAACTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAgg < 2:228766/149‑1 (MQ=255) tgAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCt < 2:20690/147‑1 (MQ=255) aacgaacCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGCCGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTcgc > 1:214835/1‑149 (MQ=255) ccTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAAtt > 2:225583/1‑148 (MQ=255) tGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTa > 4:94991/1‑147 (MQ=255) ggCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGtt > 7:322909/1‑149 (MQ=255) gCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGttt < 8:322909/149‑1 (MQ=255) aCCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCa < 3:355246/147‑1 (MQ=255) cAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAg > 8:376947/1‑123 (MQ=255) cAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAg < 7:376947/123‑1 (MQ=255) aaCATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCActgct < 1:65838/149‑1 (MQ=255) aCATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCActgctg > 8:100642/1‑149 (MQ=255) aCTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGt > 3:287452/1‑149 (MQ=255) aCTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGt > 3:198266/1‑149 (MQ=255) aCTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGt > 7:214360/1‑149 (MQ=255) ctctTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTc < 8:214360/149‑1 (MQ=255) tctTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGt > 3:193456/1‑147 (MQ=255) ttCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAgg > 2:263780/1‑149 (MQ=255) ttCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCCCGTAGGCCTTCGCGAATTAAAGATTCACTGCTTGCGTCAgt > 2:185335/1‑148 (MQ=255) ccAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAg < 7:186547/146‑1 (MQ=255) ccAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGgc > 4:348898/1‑149 (MQ=255) cAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGgc > 1:114457/1‑148 (MQ=255) aGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGgcga < 4:198266/149‑1 (MQ=255) aGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGgc > 3:331086/1‑147 (MQ=255) gTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGATGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCa > 1:22138/1‑130 (MQ=255) gTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGATGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCa > 1:307227/1‑130 (MQ=255) gTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGATGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCa < 2:307227/130‑1 (MQ=255) gTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGATGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCa < 2:22138/130‑1 (MQ=255) ggggCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGAttt < 2:114457/148‑1 (MQ=255) gggCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTg < 4:193456/149‑1 (MQ=255) gCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCt < 1:280868/149‑1 (MQ=255) cGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTc < 3:348898/149‑1 (MQ=255) cgcgATCTTGTTCATGTTACGTCAAAGTGGTACAGGCATATATCTGACGGTCTTCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGTCTTCGCGAATTAAAGTTTCACTGCTGGCGTCATGGCGAGCGATTTTGCTCACCATGc < 1:185335/149‑1 (MQ=255) cgcgATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGc < 1:61326/149‑1 (MQ=255) cTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGgcttgctt > 4:276687/1‑149 (MQ=255) cTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGgc < 4:331086/143‑1 (MQ=255) aTCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTtg > 4:112910/1‑149 (MQ=255) aTCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTtg > 3:335228/1‑149 (MQ=255) ccGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTtgtg < 7:261681/146‑1 (MQ=255) ccGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTtgtg < 7:291293/146‑1 (MQ=255) ccGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTgg < 4:335228/147‑1 (MQ=255) ccGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTgg < 7:100642/147‑1 (MQ=255) cGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGATTTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGtt > 2:374088/1‑148 (MQ=255) ggCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTta < 4:287452/149‑1 (MQ=255) aCCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAgcgc > 2:364539/1‑149 (MQ=255) gCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAGCGccacc > 8:216970/1‑149 (MQ=255) gCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAGCGccac > 8:153832/1‑148 (MQ=255) gAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAGCGCCACCAgc < 4:28621/149‑1 (MQ=255) aaaTCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGgcgagc < 3:11201/93‑1 (MQ=255) aaaTCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGgcgagc > 4:11201/1‑93 (MQ=255) aaaTCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGgcttg < 6:134436/116‑1 (MQ=255) aaaTCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAGCGCCACCAgcg > 4:161695/1‑149 (MQ=255) aaaTCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGAGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGgcttg > 5:134436/1‑116 (MQ=255) tCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAGCGCCACCAGCGCgg > 3:174609/1‑149 (MQ=255) cAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAGCGCCACCAGCGCgg > 3:333164/1‑148 (MQ=255) | GAGGGCATCGCCGCGCAGTTTCGCTGCTTTGATGAAAATCTCCATCTGTGAACGAACCTGCGGCTGACCAACATACTCTTCCAGTAATTTGGGGCGAATGGCGCGATCTGCTACATCTTCCGGCAAAGTGGTACCGGCAGAAATCAGACGGTCTGCTTCAATCATCCTTTACCTCATAACGCGGCGCGTAGGGCTTCGCGAATTAAAGTTTCACTGCTGGCGTCAGGGCGAGCGATTTTGCTCACCATGCGGCTTGCTTCTTGTGGTTTATAGCCCAGCGCCACCAGCGCGG > NC_000913/1945192‑1945483 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |