New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	225456 =	14 (0.150)	5 (0.060) +AAGAGGTTTTAACTACATGTTA	4/230	10.5	18.9%	noncoding (76/77 nt)	ileV	tRNA‑Ile
	?	NC_000913	= 2518117	37 (0.380)					intergenic (‑1/+39)	alaX/alaW	tRNA‑Ala/tRNA‑Ala
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TATTACAAAAGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGG  >  NC_000913/2517978‑2518262                                                                                                                                            |                                                                                                                                                  tATTACAAAAGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGtt                                                                                                                                          <  8:412520/149‑1 (MQ=255) tATTACAAAAGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGGGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGt                                                                                                                                           <  5:332071/148‑1 (MQ=255)   ttACAAATGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGttt                                                                                                                                         <  6:170162/148‑1 (MQ=255)   ttACAAAAGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGttt                                                                                                                                         <  4:288042/148‑1 (MQ=255)   ttACAAAAGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTa                                                                                                                                        >  5:152520/1‑149 (MQ=255)     aCAAAAGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACg                                                                                                                                      >  3:92036/1‑149 (MQ=255)      cAAAAGCGGCAAAAAGCAGAGACAAAAAACCCCCGATTTGCAGCGAGGGTTGGAAATATGCTGGAGCTAAGCGCGATCGAACCGCTGACCTCTAGCATGCCATGCAAGCCCTCTCCCACCTGAGCTAAAGCCCCACGATGCGTTTAcc                                                                                                                                      >  8:166407/1‑147 (MQ=255)         aaGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTAc                                                                                                                                   >  8:80326/1‑148 (MQ=255)              gCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGCACCGCAGCCCTCGTGCATGCCAGGCACGCGCGCGGCCAGCTGAGCGATTGGCCGCCGAGGCGTTTACGTACCAAGtt                                                                                                                             >  5:392352/1‑149 (MQ=25)                aaaaaGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGttt                                                                                                                                         <  5:239340/135‑1 (MQ=255)                aaaaaGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGttt                                                                                                                                         >  6:239340/1‑135 (MQ=255)                    aGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTgg                                                                                                                       <  6:11838/149‑1 (MQ=255)                      cAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGt                                                                                                                     <  2:95834/149‑1 (MQ=255)                                aaccccccTCTTTGCAGCGAGGGTTGGAAATTTGTTGGAGCTAAGCTGGATCGAACCGCTGACCTATTGCATGCCATGCAAGAGCTCTCCAAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCATAATTtg                                                                                                           <  7:166407/146‑1 (MQ=25)                                 aaCCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTtgg                                                                                                          <  7:80326/149‑1 (MQ=255)                                   cccccGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGAGCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCGCGCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTtggtt                                                                                                        <  5:109546/149‑2 (MQ=255)                                    ccccGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTtggtgg                                                                                                       >  3:161269/1‑149 (MQ=255)                                     cccGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGa                                                                                                      <  4:92036/149‑1 (MQ=255)                                                    gggTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGt                                                                                                                                     >  3:167746/1‑103 (MQ=255)                                                    gggTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGt                                                                                                                                     <  4:167746/103‑1 (MQ=255)                                                           aaaTTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTTCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTg                                                                                <  6:152520/149‑1 (MQ=255)                                                            aaTTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGa                                                                               <  7:100386/149‑1 (MQ=255)                                                                           aGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCGACCTCAGCTATAGCCCGACGATGCGTTTACGTACCAAGGTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGAt                                                                                          <  5:361810/123‑1 (MQ=25)                                                                           aGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGCGCTGGGTTTACGTACAAAGTTTGCTGGGGGCAAAATTTGGTGGAGCTAAGCGGGAt                                                                                          >  6:361810/1‑123 (MQ=21)                                                                           aGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGAt                                                                                          >  2:402791/1‑123 (MQ=255)                                                                           aGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGAt                                                                                          <  1:402791/123‑1 (MQ=255)                                                                                               ctctTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGAt                                                                                          >  2:365416/1‑103 (MQ=255)                                                                                                      atgccatgcAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGa                                                                               <  4:79819/107‑1 (MQ=255)                                                                                                                       tcCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTACAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCaa                                                            <  1:157822/109‑1 (MQ=255)                                                                                                                       tcCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTACAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCaa                                                            >  2:157822/1‑109 (MQ=255)                                                                                                                                aGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGTGTGCAAAATTTGGTTGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCtt                   <  1:403214/141‑1 (MQ=255)                                                                                                                                  cTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCt                                              >  3:199061/1‑112 (MQ=255)                                                                                                                                  cTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCt                                              <  4:199061/112‑1 (MQ=255)                                                                                                                                    ataGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACg       >  8:279633/1‑149 (MQ=255)                                                                                                                                       gCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGggc    >  8:25638/1‑149 (MQ=255)                                                                                                                                          ccACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTAGTCGAGTTGACGggcgg  >  8:29233/1‑148 (MQ=255)                                                                                                                                          ccACGATGAGTTTACGTACAAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGACATGAAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTAACGTAAAGATGGTCGAGTTGACggcctg  >  7:174992/1‑144 (MQ=21)                                                                                                                                            |                                                                                                                                                  TATTACAAAAGCGGCAAAAAGCAGAGACAAAAAACCCCCGCTTTGCAGCGAGGGTTGGAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCACGATGCGTTTACGTACCAAGTTTGCTGGGTGCAAAATTTGGTGGAGCTAAGCGGGATCGAACCGCTGACCTCTTGCATGCCATGCAAGCGCTCTCCCAGCTGAGCTATAGCCCCGTCACGTAAAGCTTGTCGAGTTGACGGGCGG  >  NC_000913/2517978‑2518262

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.