New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3688674 =	0 (0.000)	29 (0.920)	26/268	0.3	60.4%	coding (500/3474 nt)	bcsC	cellulose synthase subunit
	?	NC_000913	= 4506221	38 (1.210)					coding (935/1119 nt)	yjhC	GFO/IDH/MOCA family putative oxidoreductase. NAD(P)‑dependent

GGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3688808‑3688674 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTTTGTCTGAC  <  NC_000913/4506221‑4506077                                                                                                                                                                                                                                                                                          GGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGC                                                                                                                                     <  2:136752/149‑1     ACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGC                                                                                                                                 <  3:98005/149‑1          CGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAA                                                                                                                            >  2:13522/1‑149            GTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATG                                                                                                                          >  8:88989/1‑149                         AGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCTGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCC                                                                                                             <  3:96301/149‑1                          GCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTagatcgg                                                                                                            >  1:3340/1‑142                          GCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCT                                                                                                            >  2:119131/1‑149                          GCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTT                                                                                                                    <  2:3340/141‑1                                GCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGA                                                                                                      >  3:33209/1‑149                                          ACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCT                                                                                             >  7:99608/1‑148                                           CAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTAT                                                                                           <  4:33209/149‑1                                                  TTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCC                                                                                     <  8:99608/148‑1                                                     AACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATC                                                                                  >  3:81949/1‑148                                                        GGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATT                                                                              <  4:81949/149‑1                                                               CGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGG                                                                       >  1:114981/1‑149                                                                          GACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAG                                                                        >  7:15208/1‑137                                                                          GACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAG                                                                        <  8:15208/137‑1                                                                              TTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGACATAATGGTGGTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTTCCTTTCC                                                        >  3:10465/1‑149                                                                                      GAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATC                                                 <  1:13522/148‑1                                                                                      GAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCT                                                                           >  5:31052/1‑122                                                                                      GAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCT                                                                           <  6:31052/122‑1                                                                                        GTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATC                                              <  2:114981/149‑1                                                                                                     GTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGT                                 >  7:16314/1‑149                                                                                                                 CCGGCTCGCCGTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGAC                      >  8:89884/1‑148                                                                                                                           GTGGCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCT           <  7:89884/149‑1                                                                                                                              GCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTTT         <  8:16314/148‑1                                                                                                                              GCGAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTTT         <  1:119131/148‑1                                                                                                                                GAAGCGATCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTTTGTC      >  1:70062/1‑149                                                                                                                                    CGATCTTATTAAACTGGCAAGCCATTATGGTGTTTTTTTTCCTGGATCACCATATGCTATATCGCCATCCATTTCTGAGGGCATATTGCCTTTCCGACGATCATCATCTTCTTGATGTGTTTCATCGACCAAAAAATGCTTTGTCTGAa  <  4:10465/149‑2                                                                                                                                                                                                                                                                                          GGCGACGACCGGTCATGCAGAAGAAGCTGTGGCGAGTTACAACAAACTGTTCAACGGTGCGCCGCCGGAAGGTGACATTGCTGTCGAGTACTGGAGTACGGTGGCGAAAATTCCGGCTCGCCGTGGCGAAGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3688808‑3688674 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tCTTATTAAACTGGCAAGCCATAATGGTGTTTTTTTTCCTGGATGACCATATGCTATAGCGCCATCCATTTCTGAGGTCATATTGCCTTTCCGACGATCATCATCTTCTTCTTGTGTTTCATGGACCAAAAAATGCTTTGTCTGAC  <  NC_000913/4506221‑4506077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.