Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 911,086 IS2 (–) +5 bp intergenic (‑37/+92) poxB ← / ← hcr pyruvate dehydrogenase, thiamine triphosphate‑binding, FAD‑binding/HCP oxidoreductase, NADH‑dependent

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 381260 =NA (NA)21 (0.660) 20/270 0.7 91.0% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 911086 = 2 (0.070)intergenic (‑37/+96) poxB/hcr pyruvate dehydrogenase, thiamine triphosphate‑binding, FAD‑binding/HCP oxidoreductase, NADH‑dependent
* ? NC_000913 = 382590NA (NA)35 (1.110) 31/268 0.2 94.4% noncoding (1331/1331 nt) IS2 repeat region
?NC_000913 = 911090 2 (0.070)intergenic (‑41/+92) poxB/hcr pyruvate dehydrogenase, thiamine triphosphate‑binding, FAD‑binding/HCP oxidoreductase, NADH‑dependent

CAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/382443‑382590
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGTCTTAGTGACAGTCT  <  NC_000913/911090‑910943
                                                                                                                                                                                                                                                                                                        
CAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCAC                                                                                                                                                     <  5:27571/149‑1
             AGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA                                                                                                                                                      >  1:156746/1‑135
             AGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA                                                                                                                                                      <  2:156746/135‑1
               AGGCGTTCGAGCATTATAACGCATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATCACAGATGGCGGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGT                                                                                                                                      <  8:91023/149‑1
                    TTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTT                                                                                                                                     >  1:52517/1‑145
                    TTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTT                                                                                                                                     <  2:52517/145‑1
                    TTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA                                                                                                                                                      >  3:120966/1‑128
                    TTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA                                                                                                                                                      <  4:120966/128‑1
                    TTCGAGCATTATAACGAAAGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCA                                                                                                                                 >  2:119261/1‑149
                       GAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCACGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGCTAACAGATGGCTGGAAATATAGGGGCACATCCACTAACCATGTTACCGTTATCccct                                                                                                                              >  7:103714/1‑145
                                             CGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGA                                                                                                         <  4:53974/148‑1
                                             CGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGA                                                                                                         >  3:53974/1‑148
                                              GCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAA                                                                                                       <  7:105016/149‑1
                                              GCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAA                                                                                                       >  2:85280/1‑149
                                                      CGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGT                                                                                               <  4:6850/149‑1
                                                       GCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTT                                                                                              <  1:119261/149‑1
                                                            GTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGC                                                                                         <  6:138738/149‑1
                                                             TTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCT                                                                                        >  4:66939/1‑149
                                                               ATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTT                                                                                       <  3:66939/148‑1
                                                                        CACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAA                                                                             <  1:85280/149‑1
                                                                        CACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCA                                                                              >  4:94519/1‑148
                                                                            GGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCA                                                                                           >  3:80839/1‑131
                                                                            GGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCA                                                                                           <  4:80839/131‑1
                                                                             GAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAG                                                                                                                          >  1:131424/1‑99
                                                                             GAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAG                                                                                                                          <  2:131424/99‑1
                                                                                    TGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATC                                                                 >  3:24936/1‑149
                                                                                    TGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATC                                                                 >  8:121965/1‑149
                                                                                            ctGGCTTGTAATGGGTTAAGTGCTAACAGATGTCTTGAAATATTGGGGCAACTCCACTAAACTTGTTACCGTTATCAAATTCTGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACCCTCGAATCGGCAGGGG                                                         <  8:103714/147‑1
                                                                                                               GTGATAACAGATGTCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGT                                      >  2:55591/1‑149
                                                                                                                            TCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTC                                                                      <  4:125199/104‑1
                                                                                                                            TCTGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTC                                                                      >  3:125199/1‑104
                                                                                                                              TGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAA                                                                                                       <  7:21165/69‑1
                                                                                                                              TGGAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAA                                                                                                       >  8:21165/1‑69
                                                                                                                                GAAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGG                                                          >  4:47501/1‑112
                                                                                                                                 AAATATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAA                    <  7:121965/149‑1
                                                                                                                                     ATAGGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGT                >  3:86666/1‑149
                                                                                                                                        GGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGTCTT             <  4:86666/149‑1
                                                                                                                                        GGGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGTCT              <  3:94519/148‑1
                                                                                                                                         GGGCAAATCCACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGTCT              >  7:32920/1‑147
                                                                                                                                                   ACTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGTCTTAGTGACAGTCT  >  6:54746/1‑149
                                                                                                                                                                                                                                                                                                        
CAAAGAACCTTGCAGAGGCGTTCGAGCATTATAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAAGTGATAACAGATGTCTGGAAATATAGGGGCAAATCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/382443‑382590
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCTAAACTTGTTACCGTTATCACATTCAGGAGATGGAGAACCATGAAACAAACGGTTGCAGCTTATATCGCCAAAACACTCGAATCGGCAGGGGTGAAACGCATCTGGGGAGTCACAGGCGACTCTCTGAACGGTCTTAGTGACAGTCT  <  NC_000913/911090‑910943

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.