New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2729443 =	37 (0.400)	3 (0.030)	3/244	NT	8.0%	noncoding (2/76 nt)	gltW	tRNA‑Glu
	?	NC_000913	2729485 =	35 (0.410)					intergenic (‑41/+131)	gltW/rrsG	tRNA‑Glu/16S ribosomal RNA of rrnG operon

TCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAAC  >  NC_000913/2729340‑2729632                                                                                                                                                  |                                                                                                                                                    acacagattgtctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgttcgctttctattaatgaaagctcaccctACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAgg                                                                                                                                                   >  8:73919‑M1/104‑148 (MQ=255)    cagattgtctgatagaacgggaaacgcaaggcgtttccgcgttgggagtgaggcggaagagaataaggccgttcgctgtctattaatgaacgctcaccctACACGAATATTGCTGATCACGCGTTGCGTGATATTTTCGTGTAGGGTGa                                                                                                                                               >  4:271182‑M1/101‑149 (MQ=255)           tctgatagaaagtgaaaagcaaggcgtttacgcgttgggagtgaggctgaagagaataaggccgtgcgctttctattaatgaaacctcaccctACACGAAAAT‑‑‑‑‑ATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTaa                                                                                                                                    >  1:257155‑M1/94‑148 (MQ=255)           tctctcacAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGTGACACGAAAATTGCGTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTc                                                                                                                                         <  8:104956/145‑1 (MQ=0)                                                                          ggCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTa                                                                         <  4:392032/149‑1 (MQ=11)                                                                               tgtCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGATGCGGGATATTTTCTTGTAGGGTGAGATTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCAc                                                                    >  6:68395/1‑149 (MQ=255)                                                                               tgtCCTGGGCCTCTAGAAGAAGGGGACACGAAAATTGCTTATCACACGTTGCGTGATATTTTCGTGTAGGGTGAGATTTCATTAATAGAAAGCGAACGTCCTTATTCTCTTCAGCCTCACTCACAAAGCGTAAACGACTTGCTATTCa                                                                     >  5:97857/1‑148 (MQ=11)                                                                                   cTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtttt                                                                >  8:401312/1‑149 (MQ=32)                                                                                    tGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACtttt                                                                >  5:77142/1‑148 (MQ=32)                                                                                      ggCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcat                                                             <  5:156785/149‑1 (MQ=35)                                                                                      ggCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtca                                                              <  6:77142/148‑1 (MQ=34)                                                                                      cgCCTCTAGCCGACGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTtcat                                                             <  6:406357/148‑1 (MQ=25)                                                                                          tctAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGa                                                         >  8:396147/1‑149 (MQ=37)                                                                                           ttaatgaaagctcaccctacacgaaaatatcacgcaacgcgtgatattttcgtgtAGGGTGAGGTTTCATTAATAGAAAGCGCACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTTTTCACTTTCTATCAGa                                                         >  1:257155‑M2/56‑148 (MQ=255)                                                                                            tAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGAc                                                        >  8:324540/1‑148 (MQ=37)                                                                                              gACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAAt                                                     <  2:197668/149‑1 (MQ=37)                                                                                                cGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCt                                                   >  4:396075/1‑149 (MQ=37)                                                                                                cGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCt                                                   <  4:301736/149‑1 (MQ=37)                                                                                                 tcaccctacacgaaaatatcacgcaacgcgtgatcagcaatattcgtgtAGGGTGAGCGTTCATTAATAGACAGCGAACGGCCTTATTCTCTTCCGCCTCACTCCCAACGCGGAAACGCCTTGCGTTTCCCGTTCTATCAGACAATCtg                                                  >  4:271182‑M2/50‑149 (MQ=255)                                                                                                  aaGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgt                                                 <  7:92615/149‑1 (MQ=37)                                                                                                   aGGTGACACGAAAATTGCTTTTCACGCGTTGCGTTATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTTTTCTCTTCAGCCTCACTCACAACGCTTAAACGCCTTGCTATTCACTTTTCATCTGACAATCtgt                                                 <  8:384564/148‑1 (MQ=11)                                                                                                     cctacacgaaaatatcacgcaacgcgtgataagcaattttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTTTTCACTTTCTATCAGACAATCtgtgt                                               >  8:73919‑M2/46‑148 (MQ=255)                                                                                                      ggACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGa                                             <  5:40236/149‑1 (MQ=37)                                                                                                      ggACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGa                                             <  7:121152/149‑1 (MQ=37)                                                                                                       gACACGAAAATTGCTTATCACGCGTTGCTTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtgt                                               <  4:99864/146‑1 (MQ=37)                                                                                                       gACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAg                                            >  1:397905/1‑149 (MQ=37)                                                                                                       acCACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCtgtgt                                               <  3:99864‑M1/144‑1 (MQ=255)                                                                                                          ACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTaa                                                                                                                                    >  1:189199‑M1/1‑58 (MQ=255)                                                                                                          ACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTaa                                                                                                                                    <  2:189199‑M1/58‑1 (MQ=255)                                                                                                          ACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACttt                                                                 >  2:81059‑M1/1‑125 (MQ=255)                                                                                                          ACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACttt                                                                 <  1:81059‑M1/125‑1 (MQ=255)                                                                                                          ACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCAc                                         <  1:101782‑M1/149‑1 (MQ=255)                                                                                                          ACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCAc                                         <  4:38123‑M1/149‑1 (MQ=255)                                                                                                           CGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACt                                        >  1:140385‑M1/1‑149 (MQ=255)                                                                                                            GAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTTAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTg                                       <  5:250254‑M1/149‑1 (MQ=255)                                                                                                            GAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTg                                       <  3:270439‑M1/149‑1 (MQ=255)                                                                                                            GAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTg                                       <  5:244735‑M1/149‑1 (MQ=255)                                                                                                            GAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTg                                       <  1:199581‑M1/149‑1 (MQ=255)                                                                                                               AATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCa                                     <  1:19581‑M1/148‑1 (MQ=255)                                                                                                               AATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCa                                     <  8:273585‑M1/148‑1 (MQ=255)                                                                                                                ATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCaaa                                   >  7:264004‑M1/1‑149 (MQ=255)                                                                                                                ATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATACACTTTTCATCAGACAATCTGTGTGAGCACTGCaaa                                   >  8:194323‑M1/1‑149 (MQ=255)                                                                                                                 TTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAATCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAg                                  >  6:35191‑M1/1‑149 (MQ=255)                                                                                                                 TTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAg                                  <  7:349130‑M1/149‑1 (MQ=255)                                                                                                                 TTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAg                                  >  3:310780‑M1/1‑149 (MQ=255)                                                                                                                 TTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAg                                  >  4:127652‑M1/1‑149 (MQ=255)                                                                                                                  tGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCCCTGCAAAg                                  >  2:127139/1‑148 (MQ=255)                                                                                                                   gCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGt                                 <  8:134584/148‑1 (MQ=39)                                                                                                                    cTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTa                                <  5:221551/148‑1 (MQ=39)                                                                                                                        tCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTACACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCATAGTACGctt                           <  4:135962/149‑1 (MQ=255)                                                                                                                        tCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGctt                           >  4:88383/1‑149 (MQ=39)                                                                                                                        tCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGctt                           >  2:111412/1‑149 (MQ=39)                                                                                                                        tCACGCGGTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTCCGctt                           >  7:417054/1‑149 (MQ=255)                                                                                                                          aCGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTGTCTTCAGCCTCACTCCCAACGCGTATACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTTAGCACTGCAAAGTACGattct                         >  3:114683/1‑149 (MQ=255)                                                                                                                          aCGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGCCAATCTGTGTGAGCACTGCAAAGTACGcttct                         >  2:340208/1‑149 (MQ=255)                                                                                                                          aCGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGcttc                          <  8:3380/148‑1 (MQ=39)                                                                                                                           cgcgTTGCGTGATATTTTCGTGTATGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGcttctt                        <  6:94962/149‑1 (MQ=255)                                                                                                                               ttGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaag                    <  3:88383/149‑1 (MQ=39)                                                                                                                                 gCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaagg                   <  4:270439/148‑1 (MQ=39)                                                                                                                                  cGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaaggt                  <  8:120754/148‑1 (MQ=39)                                                                                                                                  cGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaaggt                  <  8:401570/148‑1 (MQ=39)                                                                                                                                   gTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaaggt                  >  3:39850/1‑147 (MQ=39)                                                                                                                                   gTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCGTGCTATTCACTTTTCATCAGACATTCTGTGTGAGCACTGCAAAGTAAGATTATTtaaggt                  >  6:23156/1‑147 (MQ=14)                                                                                                                                    tGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaaggtaag               >  3:116632/1‑149 (MQ=39)                                                                                                                                     gATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaaggtaag               >  2:47033/1‑148 (MQ=39)                                                                                                                                      atatTTTCGTGTAGGGTGAGATTTAATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCATAACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTtaaggtaag               >  2:224175/1‑147 (MQ=255)                                                                                                                                        attttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAaggagg           >  1:202757‑M2/11‑149 (MQ=255)                                                                                                                                          tttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAATGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGcttct                         <  3:232609‑M2/125‑1 (MQ=255)                                                                                                                                          tttcgtgtAGGGTGAGCTTTCATTAATAGAAAGCGAATGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGcttct                         >  4:232609‑M2/9‑133 (MQ=255)                                                                                                                                              gtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATcc     <  4:331650‑M2/145‑1 (MQ=255)                                                                                                                                              gtgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATc      <  4:362255‑M2/144‑1 (MQ=255)                                                                                                                                               tgtAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTACCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATcc     >  7:248952‑M2/4‑148 (MQ=255)                                                                                                                                                  aGGGTGAGCTTTCATTAATAGAAAGCGAACTGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAAc  <  6:97857/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    TCGGCGACTTTCACTCACAAACCAGCAAGTGGCGTCCCCTAGGGGATTCGAACCCCTGTTACCGCCGTGAAAGGGCGGTGTCCTGGGCCTCTAGACGAAGGGGACACGAAAATTGCTTATCACGCGTTGCGTGATATTTTCGTGTAGGGTGAGCTTTCATTAATAGAAAGCGAACGGCCTTATTCTCTTCAGCCTCACTCCCAACGCGTAAACGCCTTGCTATTCACTTTTCATCAGACAATCTGTGTGAGCACTGCAAAGTACGCTTCTTTAAGGTAAGGAGGTGATCCAAC  >  NC_000913/2729340‑2729632

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.