BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1997022 =	95 (1.020)	5 (0.060)	3/244	NT	5.3%	intergenic (‑190/+40)	sdiA/yecC	quorum‑sensing transcriptional activator/putative ABC transporter ATPase
*	?	NC_000913	1997051 =	91 (1.050)	5 (0.060)	3/244	NT	5.3%	intergenic (‑219/+11)	sdiA/yecC	quorum‑sensing transcriptional activator/putative ABC transporter ATPase

Only 100 of 111 total aligned reads displayed.

ATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGTCCGCAACATCCCGGGCA  >  NC_000913/1996909‑1997197

gaccaggggcggatagtcgagcagggggccgcaaaagcgttatttgccgaccccgagcagcctcgcacccgccagttcctcgagaagtttctgctgcaataataagaaaaaatCAGCCCCGACAGGTGAATCGTCGGGGCTGAtttttt                                                                                                                                              >  3:86595‑M1/114‑149 (MQ=255)

ataATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGAtttttt                                                                                                                                              >  8:317250/1‑149 (MQ=255)

 taattaatATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCGCTTCTGGTCTAAATGAGTTATGCTGATTTGTTAAGCAGTTTTCTCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTc                                                                                                                                             <  1:389459/149‑1 (MQ=255)

 taATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGAtttttt                                                                                                                                              <  3:294646/148‑1 (MQ=255)

 taATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTc                                                                                                                                             >  1:198357/1‑149 (MQ=255)

 taATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTc                                                                                                                                             >  7:244658/1‑149 (MQ=255)

 taATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTc                                                                                                                                             <  4:338874/149‑1 (MQ=255)

   aTTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCtt                                                                                                                                           <  3:230891/149‑1 (MQ=255)

     ggggcggatagtcgagcagggggccgcaaaagcgttatttgccgaccccgagcagcctcgcacccgccagttcctcgagaagtttctgctgcaataataagaaaaaatCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCtta                                                                                                                                          >  4:187695‑M1/109‑148 (MQ=255)

     ggggcggatagtcgagcagggggccgcaaaagcgttatttgccgaccccgagcagcctcgcacccgccagttcctcgagaagtttctgctgcaataataagaaaaaatCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCtta                                                                                                                                          >  4:194041‑M1/109‑148 (MQ=255)

     ggggcggatagtcgagcagggggccgcaaaagcgttatttgccgaccccgagcagcctcgcacccgccagttcctcgagaagtttctgctgcaataataagaaaaaatCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCtta                                                                                                                                          <  3:194041‑M1/40‑1 (MQ=255)

     ggggcggatagtcgagcagggggccgcaaaagcgttatttgccgaccccgagcagcctcgcacccgccagttcctcgagaagtttctgctgcaataataagaaaaaatCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCtta                                                                                                                                          <  3:187695‑M1/40‑1 (MQ=255)

        tattatTCAGGCAATGAATTCCTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCTACAGGTGAATCGTCGGGGCTGATTTTTTCttatta                                                                                                                                       <  4:118433/148‑1 (MQ=255)

            attCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTg                                                                                                                                    >  7:290573/1‑147 (MQ=255)

            attCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTg                                                                                                                                    >  4:13504/1‑147 (MQ=255)

            attCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGGCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTgc                                                                                                                                   <  7:355521/148‑1 (MQ=255)

             ttCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTgcag                                                                                                                                 >  3:123172/1‑149 (MQ=255)

             ttCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTgcag                                                                                                                                 >  7:234415/1‑149 (MQ=255)

             ttCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTgcag                                                                                                                                 >  1:244455/1‑149 (MQ=255)

              tCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTgcag                                                                                                                                 >  1:394917/1‑148 (MQ=255)

                aGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTgcag                                                                                                                                 >  4:9414/1‑146 (MQ=255)

                   cAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGaaa                                                                                                                           >  4:337692/1‑149 (MQ=255)

                    aaTGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAAc                                                                                                                          >  7:250695/1‑149 (MQ=255)

                       gAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTtc                                                                                                                       >  1:305787/1‑149 (MQ=255)

                         aTTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTtctc                                                                                                                     <  2:268225/149‑1 (MQ=255)

                         aTTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATAGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTtctc                                                                                                                     >  5:202593/1‑149 (MQ=255)

                          ttACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCg                                                                                                                    <  3:91509/149‑1 (MQ=255)

                             cTTTTGCAAGCCATCGCATTCTCTTATGTTATGAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGGGTCCAGCCCCGGCAGGTGAATCGTCGGGGGGGATTTTTTCTTATTATTGCAGCAGAGACTTCTCGAg                                                                                                                  >  8:389658/1‑148 (MQ=255)

                              ttttGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAgg                                                                                                                 >  8:122342/1‑148 (MQ=255)

                                  gCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGa                                                                                                                   >  6:395898/1‑142 (MQ=255)

                                  gCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGa                                                                                                                   <  5:395898/142‑1 (MQ=255)

                                      gCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCgg                                                                                                        <  2:394917/149‑1 (MQ=255)

                                             cATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGGCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAg                                                                                                 <  4:123172/149‑1 (MQ=255)

                                              aTTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAgg                                                                                                <  2:198357/149‑1 (MQ=255)

                                              aTTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAgg                                                                                                <  2:332556/149‑1 (MQ=255)

                                              aTTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAgg                                                                                                >  2:38054/1‑149 (MQ=255)

                                                  tctTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGgctgc                                                                                            >  2:92217/1‑149 (MQ=255)

                                                  tctTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGgctgc                                                                                            >  1:31095/1‑149 (MQ=255)

                                                  tctTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCGGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGgctgc                                                                                            >  2:345128/1‑149 (MQ=255)

                                                   ctTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGgctgct                                                                                           >  6:36445/1‑149 (MQ=255)

                                                    ttATGTTATTATTGAGTTATGCTGATTTGTTAAGCATTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTc                                                                                          <  4:66462/149‑1 (MQ=255)

                                                      aTGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCgg                                                                                        >  6:100372/1‑149 (MQ=255)

                                                       tGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCggg                                                                                       <  4:187342/149‑1 (MQ=255)

                                                        gTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTtctc                                                                                                                     <  7:55702/118‑1 (MQ=255)

                                                        gTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTtctc                                                                                                                     >  8:55702/1‑118 (MQ=255)

                                                         ttattaATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGt                                                                                     <  8:272085/149‑1 (MQ=255)

                                                          tattaATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTc                                                                                    >  7:45321/1‑149 (MQ=255)

                                                            ttaATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCg                                                                                   <  8:244658/148‑1 (MQ=255)

                                                            ttaATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCg                                                                                   <  2:305787/148‑1 (MQ=255)

                                                              aaTGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGc                                                                                 <  5:36445/148‑1 (MQ=255)

                                                                  aGTTATGCTGATTTGTTAAGCAGTTATATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAAt                                                                             <  2:187746/148‑1 (MQ=255)

                                                                   gTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATaa                                                                           <  7:122342/149‑1 (MQ=255)

                                                                    ttATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATacc                                                                          >  6:240959/1‑147 (MQ=255)

                                                                    ttATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAAc                                                                          <  8:250695/149‑1 (MQ=255)

                                                                    ttATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCACGACCGGGGAATCGTCTGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCTGCAAATAAc                                                                          <  3:85473/149‑1 (MQ=255)

                                                                      aTGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGa                                                                                                  <  2:279446/123‑1 (MQ=255)

                                                                      aTGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGa                                                                                                  >  1:279446/1‑123 (MQ=255)

                                                                      aTGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGc                                                                        >  1:386518/1‑149 (MQ=255)

                                                                          tGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGGGGTTGGGGGGGTGCTCGGGGTGGGCAATTAACCGtttt                                                                    >  3:313346/1‑149 (MQ=255)

                                                                          tGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCtttt                                                                    >  5:253929/1‑149 (MQ=255)

                                                                             tttGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGTTTTTGCg                                                                 <  5:100372/149‑1 (MQ=255)

                                                                                 ttAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTc                                                                                    <  5:1156/126‑1 (MQ=255)

                                                                                 ttAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTc                                                                                    >  6:1156/1‑126 (MQ=255)

                                                                                 ttAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGccc                                                             >  3:229684/1‑149 (MQ=255)

                                                                                       aGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCt                                                       >  1:369378/1‑149 (MQ=255)

                                                                                            tATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTGCTCGCGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGAc                                                   >  1:367431/1‑148 (MQ=255)

                                                                                              tCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTg                                                                                                                                    <  7:322673/65‑1 (MQ=255)

                                                                                              tCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTg                                                                                                                                    >  8:322673/1‑65 (MQ=255)

                                                                                                aGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATc                                               <  3:211765/148‑1 (MQ=255)

                                                                                                aGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATATTTTCTTATTATTTCAGCAGCAACTTCTCGAGGAACTGGCGGGTGCGAGGCTTCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATcc                                              >  7:178340/1‑149 (MQ=255)

                                                                                                aGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGGCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATc                                               <  7:317250/148‑1 (MQ=255)

                                                                                                  gCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGc                                            <  3:9414/149‑1 (MQ=255)

                                                                                                      taagaaaaaatcagccccgacgattcacctgtcggggctgATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGcccc                                         <  3:187695‑M2/108‑1 (MQ=255)

                                                                                                      taagaaaaaatcagccccgacgattcacctgtcggggctgATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGcccc                                         <  3:194041‑M2/108‑1 (MQ=255)

                                                                                                      taagaaaaaatcagccccgacgattcacctgtcggggctgATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGcccc                                         >  4:194041‑M2/41‑148 (MQ=255)

                                                                                                      taagaaaaaatcagccccgacgattcacctgtcggggctgATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGcccc                                         >  4:187695‑M2/41‑148 (MQ=255)

                                                                                                      gAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGcccc                                         <  7:75004/148‑1 (MQ=255)

                                                                                                      gAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGccc                                          <  1:345128/147‑1 (MQ=255)

                                                                                                      gAAATGGCGTCCAGCCCCGACAGGTGAATCCTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGcccc                                         <  3:337692/148‑1 (MQ=255)

                                                                                                       aaaTGGCGTCCAGCCCCGACATGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTg                                       <  5:11054/149‑1 (MQ=255)

                                                                                                       aaaTGGCGTCCAGCCCCGACAGGTGAATCGTCGTGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCt                                        <  1:131319/148‑1 (MQ=255)

                                                                                                       aaaTGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTg                                       <  3:13504/149‑1 (MQ=255)

                                                                                                          aaaaaatcagccccgacgattcacctgtcggggctgATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTc                                    >  3:86595‑M2/37‑149 (MQ=255)

                                                                                                            gCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCa                                  <  8:290573/149‑1 (MQ=255)

                                                                                                              gTCCAGCCCCGCCAGGTGAATCGTCGGGGGTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCAt                                 >  5:316346/1‑148 (MQ=255)

                                                                                                              gTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCAt                                 >  1:208893/1‑148 (MQ=255)

                                                                                                                ccAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATaaa                              <  2:386518/149‑1 (MQ=255)

                                                                                                                      CCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGc                        <  7:371612‑M1/149‑1 (MQ=255)

                                                                                                                       CGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGATCTGGCGCGTGCGAGGCTGCTCGGGGTCGGCAAATAACCCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGcc                       >  1:178906‑M1/1‑149 (MQ=255)

                                                                                                                         ACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTc                                    <  7:302320‑M1/134‑1 (MQ=255)

                                                                                                                         ACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTc                                    >  8:302320‑M1/1‑134 (MQ=255)

                                                                                                                           aGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGt                   >  1:253447/1‑149 (MQ=255)

                                                                                                                             gTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGt                                     >  6:173842/1‑129 (MQ=255)

                                                                                                                             gTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGt                                     <  5:173842/129‑1 (MQ=255)

                                                                                                                             gTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGAGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGtac                 >  1:217704/1‑147 (MQ=255)

                                                                                                                              tGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGTCCg                >  3:311972/1‑149 (MQ=255)

                                                                                                                                 aTCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGTCCGCaa             <  4:311972/149‑1 (MQ=255)

                                                                                                                                         ggctgATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGTCCGCAACATCCCgg     <  1:92217‑M2/144‑1 (MQ=255)

                                                                                                                                          gctgATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGTCCGCAACATCCCggg    <  4:167268‑M2/145‑1 (MQ=255)

                                                                                                                                            tgATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGTCCGCAACATCCCGGGCa  >  4:316358‑M2/3‑149 (MQ=255)

ATAATTTATATTATTCAGGCAATGAATTACTTTTGCAAGCCATCGCATTCTCTTATGTTATTAATGAGTTATGCTGATTTGTTAAGCAGTTTTATCAGGCTTGAAATGGCGTCCAGCCCCGACAGGTGAATCGTCGGGGCTGATTTTTTCTTATTATTGCAGCAGAAACTTCTCGAGGAACTGGCGGGTGCGAGGCTGCTCGGGGTCGGCAAATAACGCTTTTGCGGCCCCCTGCTCGACTATCCGCCCCTGGTCCATAAAGATCGCCCGGTCCGCAACATCCCGGGCA  >  NC_000913/1996909‑1997197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.