New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 357562NA (NA)3 (0.030) 3/250 NT NA noncoding (79/79 nt) REP27 (repetitive extragenic palindromic) element; contains 2 REP sequences REP27 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 357737 NA (NA)noncoding (54/79 nt) REP28 (repetitive extragenic palindromic) element; contains 2 REP sequences REP28 (repetitive extragenic palindromic) element; contains 2 REP sequences

TGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATC  >  NC_000913/357420‑357709
                                                                                                                                              |                                                                                                                                                   
tGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCATGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTc                                                                                                                                                >  7:238704/1‑148 (MQ=255)
  gAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTc                                                                                                                                                <  2:406225/146‑1 (MQ=255)
  gAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAg                                                                                                                                             <  4:114451/149‑1 (MQ=255)
   agcagcCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGc                                                                                                                                            >  6:328449/1‑149 (MQ=255)
       gcCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCt                                                                                                                                        <  6:204059/149‑1 (MQ=255)
              gCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCtgt                                                                                                                                 <  2:35991/149‑1 (MQ=255)
                 aTCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTgtgt                                                                                                                               >  5:67855/1‑148 (MQ=255)
                  tCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCCCTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTgtgt                                                                                                                               >  2:48406/1‑147 (MQ=255)
                  tCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGGAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTgtgt                                                                                                                               >  1:7112/1‑147 (MQ=255)
                    gATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGc                                                                                                                           <  5:21298/149‑1 (MQ=255)
                     aTTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCg                                                                                                                          >  6:363971/1‑149 (MQ=255)
                          aaaCGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGCGCACAGAACTCGTAGGCCAGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTAc                                                                                                                     >  6:349283/1‑149 (MQ=255)
                          aaaCGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTAc                                                                                                                     >  7:51664/1‑149 (MQ=255)
                              gTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCATACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGt                                                                                                                  >  1:420617/1‑148 (MQ=255)
                                tGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGat                                                                                                               >  1:371995/1‑149 (MQ=255)
                                 gAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGat                                                                                                               <  8:124446/148‑1 (MQ=255)
                                 gAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGat                                                                                                               <  7:353007/148‑1 (MQ=255)
                                  aaCGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGatt                                                                                                              >  5:133918/1‑148 (MQ=255)
                                    cGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGattcat                                                                                                           >  7:177099/1‑149 (MQ=255)
                                      aCTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGattcattc                                                                                                         <  6:148032/149‑1 (MQ=255)
                                      aCTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGattcattc                                                                                                         >  8:48961/1‑149 (MQ=255)
                                       cTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTcc                                                                                                        <  4:309002/149‑1 (MQ=255)
                                          ggTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTccc                                                                                                       <  4:125369/147‑1 (MQ=255)
                                          ggTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCg                                                                                                      <  8:51664/148‑1 (MQ=255)
                                          ggTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGc                                                                                                     >  4:371297/1‑149 (MQ=255)
                                           gTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGc                                                                                                     >  5:402989/1‑148 (MQ=255)
                                             tACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCcaa                                                                                                  <  4:320649/149‑1 (MQ=255)
                                              aCAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCcaa                                                                                                  <  2:427303/148‑1 (MQ=255)
                                               cAGCGAGCTTAGTTTATGCCGGATGCGGCATGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCcaac                                                                                                 <  8:238704/148‑1 (MQ=255)
                                                aGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCcaacaa                                                                                               >  8:243122/1‑149 (MQ=255)
                                                aGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAAGTCCAGCCGCTGATCGGTGTCAGCGGCTACCGTGATTCATTCCCGccaccac                                                                                               >  5:206940/1‑148 (MQ=255)
                                                 gCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCaacaac                                                                                              >  4:176427/1‑149 (MQ=255)
                                                  cGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTGCCGTGATTCATTCCCGCCAACAAcc                                                                                             >  7:347740/1‑149 (MQ=255)
                                                    aGCTTAGTTTATGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACGTACAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACcgc                                                                                           <  6:264433/149‑1 (MQ=255)
                                                     gCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGC                                                                                                                                                     >  7:311076‑M1/1‑90 (MQ=255)
                                                     gCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGC                                                                                                                                                     <  8:311076‑M1/90‑1 (MQ=255)
                                                      cTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACcgc                                                                                           >  7:255007/1‑147 (MQ=38)
                                                      cTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACcgc                                                                                           <  8:255007/147‑1 (MQ=38)
                                                         aGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCa                                                                                        <  2:371995/147‑1 (MQ=37)
                                                             tATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTGCCGCCAACAACCGCGCAtttatc                                                                                  >  5:229031/1‑145 (MQ=14)
                                                               ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATtcctcc                                                                                 <  4:263389/147‑1 (MQ=14)
                                                                      tGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCAt                                                                         <  7:48961/149‑1 (MQ=255)
                                                                       gcggcgTGAACGCCTTATCCGGCCGACGGAGAGCACTGAACTCGTTGGCCTGATAAGCGTAGCGCATCAGGAAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCTTTATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCAt                                                                         <  6:347886/148‑1 (MQ=14)
                                                                          gcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCa                                                                          <  1:187004/144‑1 (MQ=255)
                                                                          gcgTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCa                                                                          >  2:187004/1‑144 (MQ=255)
                                                                               aaCGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGCTTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCaaaaa                                                                >  3:282757/1‑149 (MQ=255)
                                                                                aCGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAAt                                                               <  3:176427/149‑1 (MQ=255)
                                                                                 cGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATg                                                              <  8:417441/149‑1 (MQ=255)
                                                                                  gCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGAACTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTAATCCAACGCCATGTGCAAAAATGc                                                             >  2:353573/1‑149 (MQ=12)
                                                                                   ccTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGcc                                                            <  7:243122/149‑1 (MQ=255)
                                                                                     ttATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGACTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCATAAATGCCtt                                                          >  3:202597/1‑149 (MQ=255)
                                                                                       aTCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTTATCCAACGCCATGTGCAAAAATGCCTTCg                                                        >  3:388441/1‑149 (MQ=17)
                                                                                        tCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCg                                                        <  8:415744/148‑1 (MQ=255)
                                                                                        tCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGc                                                       <  5:328449/149‑1 (MQ=255)
                                                                                           ggCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCAt                                                                         >  3:104158/1‑128 (MQ=255)
                                                                                           ggCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCAt                                                                         <  4:104158/128‑1 (MQ=255)
                                                                                           ggCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGc                                                    <  5:363971/149‑1 (MQ=255)
                                                                                             ccTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCgg                                                  <  6:133763/149‑1 (MQ=255)
                                                                                              cTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCctacgagttcggtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagacagccgctgcgaaggcatttttgcaca                                                 >  5:80770‑M1/1‑49 (MQ=255)
                                                                                                 cGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCctacgagttcggtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagacagccgctgcgaaggcatttttgcacatg                                               <  6:80770‑M1/148‑103 (MQ=255)
                                                                                                 cGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCt                                                <  8:177099/147‑1 (MQ=255)
                                                                                                 cGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCAGCTCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTAATCCAACTCCATGTGCAAAAATTCCTTCGCAGAGGCTGt                                              >  4:69777/1‑149 (MQ=11)
                                                                                                       gCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCa                                        <  4:238159/149‑1 (MQ=255)
                                                                                                           tGAACTGGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTACCGCCAACAACCGCGCATTACTCCAACGCCATGTGCAAAAATGCCTTCGCGGCGGCTGTCTGCCAGCta                                    >  1:277954/1‑148 (MQ=255)
                                                                                                             aaCTCGTAGGGCTGATAAGCGTAGCGCATCAGGCAATTCGAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGGGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGt                                   <  6:395580/148‑1 (MQ=255)
                                                                                                                  gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGtt                               <  2:171890/147‑1 (MQ=255)
                                                                                                                  gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTa                             <  3:371297/149‑1 (MQ=255)
                                                                                                                  gTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTa                             >  5:106455/1‑149 (MQ=255)
                                                                                                                   tAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTAt                            <  5:349283/149‑1 (MQ=255)
                                                                                                                     ggCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGAATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATg                           <  2:329415/148‑1 (MQ=255)
                                                                                                                      gCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGcc                         >  7:76439/1‑149 (MQ=255)
                                                                                                                        cTGATAAGCGTAGCGCATCAGGCctacgagttcagtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagacagccgctgcgaaggcatttttgcacatggcgttggaggaatgcgcggttgtt                       >  8:76439‑M1/1‑23 (MQ=255)
                                                                                                                         tGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGa                      >  2:223576/1‑149 (MQ=255)
                                                                                                                               gCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATgcggc                >  2:272188/1‑149 (MQ=255)
                                                                                                                                cGTAGCGCATCAGGCAATTCCAGCCGCTGATCTCTGTCAGCGGCTACCGTGAGTCATTCCCGCCACCACCCGCGCATTCCTCCACCGCCATGTGCAAAAATGCCTTCGCCGCCGCTGTCTGCCAGCGGGACTTTATGCCGGATgcggcg               >  7:334731/1‑149 (MQ=17)
                                                                                                                                 gTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACACCCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGt              >  7:248866/1‑149 (MQ=255)
                                                                                                                                  tAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGAGCTTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGGCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTg             <  4:282757/149‑1 (MQ=255)
                                                                                                                                    gcgcATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGaa           <  7:227144/149‑1 (MQ=255)
                                                                                                                                    gcgcATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATAAGGCGttca           >  4:127112/1‑146 (MQ=255)
                                                                                                                                     ggcagcaGGACATTACAGCCGCTGATCTGGCTATGCTGCAACCTTGAGTCAATCACGCCCACAACCGCGCATACCCCCCACGCCATCTCCAACAATCCCTGCGCCGCGGCGTTCTCCCTGCGGTAGTTTATGCCGGATGCGGCGTGAAc          <  2:340180/148‑1 (MQ=255)
                                                                                                                                     cgcATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAAc          >  5:307989/1‑149 (MQ=255)
                                                                                                                                       cATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGc        <  6:307989/149‑1 (MQ=255)
                                                                                                                                       cATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGc        >  6:138695/1‑149 (MQ=255)
                                                                                                                                        aTCAGGGAAGTCCCGCGGCTGATCGGTCTCTCCTGCTACCTTGATTCATTCCCCCCCCCAACCCCGCATTCCCCCAACGCCATGTCCAACAATGCCTTCGCAGCGGCTGTCTCCCACCCGTAGTTTATGCCGGATGCGGCGTGAACGcc       <  2:167944/149‑1 (MQ=255)
                                                                                                                                        aTCAGGCctacgagttcagtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagacagccgctgcgaag                                                              >  5:161042‑M1/1‑7 (MQ=255)
                                                                                                                                        aTCAGGCctacgagttcagtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagacagccgctgcgaag                                                              <  6:161042‑M1/94‑88 (MQ=255)
                                                                                                                                        aTCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGc        >  4:380351/1‑148 (MQ=255)
                                                                                                                                        aTCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGc        <  3:380351/148‑1 (MQ=255)
                                                                                                                                           aGGCctacgagttcagtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagacagccgctgcgaaggcatttttgcacatggcgttggaggaatgcgcggttgttggcgggaatgaatcacggt    <  6:327075‑M1/149‑146 (MQ=255)
                                                                                                                                           aGGCctacgagttcagtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagacagccgctgcgaaggcatttttgcacatggcgttggaggaatgcgcggttgttggcgggaatgaatcacgg     >  5:138695‑M1/1‑4 (MQ=255)
                                                                                                                                           aGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGCTTCATTCCCGCCACCACCCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGCCCGCCtt     >  8:155539/1‑148 (MQ=18)
                                                                                                                                            ggCctacgagttcagtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagcccgccgctgcgaaggcatttttgcacagggcgttggaggaatgcgcggtggttggcgggaatgaagcacgg     >  7:155539‑M1/1‑3 (MQ=255)
                                                                                                                                            ggCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCg                        <  5:72988/128‑1 (MQ=255)
                                                                                                                                            ggCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCg                        >  6:72988/1‑128 (MQ=255)
                                                                                                                                             gCctacgagttcagtgctctacgtaggccggataaggcgttcacgccgcatccggcataaactacagctggcagacagccgctgcgaaggcatttttgcacatggcgttggaggaatgcgcggttgttggcgggaatgaatcacggtag  >  6:106455‑M1/1‑2 (MQ=255)
                                                                                                                                             gCAATTCCAGCCGCTGATCTGTTTAAGAGGATACCTTTATTCATTCCCGCCAACAACCTCTCATTCCTCCAACGCCATGTGCAAAAATGCCTTAGCATCGGCTGTCTTCCCTCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATc  <  6:402989/149‑1 (MQ=21)
                                                                                                                                              |                                                                                                                                                   
TGGAGCAGCCAGAAGCCATCGATTACAAACGTTGAACGACTGGGTTACAGCGAGCTTAGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACGTAGAGCACTGAACTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTCCAGCCGCTGATCTGTGTCAGCGGCTACCGTGATTCATTCCCGCCAACAACCGCGCATTCCTCCAACGCCATGTGCAAAAATGCCTTCGCAGCGGCTGTCTGCCAGCTGTAGTTTATGCCGGATGCGGCGTGAACGCCTTATC  >  NC_000913/357420‑357709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.