New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	524709 =	21 (0.660)	5 (0.160)	5/248	2.9	20.3%	coding (1449/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	524735 =	19 (0.620)					coding (1475/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGGAGGACAGAGTACGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGGCAGC  >  NC_000913/524590‑524853                                                                                                                                                  |                                                                                                                       gctgcccgtcgcatccgttgtcgtcgccggtaactcactgtgcgcgtcatcgtagcggtagcgtactgtctccccgctgcgcgatgtctccgataccagcctgcccggttcatcatattCCCGGACGGGCTGGAGAGCCGCCGGGAata                                                                                                                     >  6:40917‑M1/120‑149 (MQ=255)   gaggaCAGAGTACGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTGTAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATatg                                                                                                                   <  4:17593/149‑1 (MQ=255)               cGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGc                                                                                                        <  4:68093/148‑1 (MQ=255)                    tGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTg                                                                                                  >  8:71675/1‑149 (MQ=255)                        tcgccggtaactcactgtgcgcgtcatcgtagcggtagcgtactgtctccccgctgcgcgatgtctccgataccagcctgcccggttcatcatattCCCGGACGGGCTGGAGAGCCGCCGGGAATatga                                                                                                                  >  1:38280‑M1/97‑129 (MQ=255)                        tcgccggtaactcactgtgcgcgtcatcgtagcggtagcgtactgtctccccgctgcgcgatgtctccgataccagcctgcccggttcatcatattCCCGGACGGGCTGGAGAGCCGCCGGGAATatga                                                                                                                  <  2:38280‑M1/33‑1 (MQ=255)                           ggtgTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCgg                                                                                           >  3:70284/1‑149 (MQ=255)                                  ggCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATc                                                                                    >  4:103331/1‑149 (MQ=255)                                            cGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCggg                                                                          <  1:96187/149‑1 (MQ=255)                                                    accacACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGt                                                                  <  4:70284/149‑1 (MQ=255)                                                                    gggAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATatg                                                                                                                   >  2:90075/1‑84 (MQ=255)                                                                    gggAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATatg                                                                                                                   <  1:90075/84‑1 (MQ=255)                                                                           gAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGgaga                                                                                        <  2:11357/104‑1 (MQ=255)                                                                                   aCTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGa                                    <  3:103331/148‑1 (MQ=255)                                                                                       taACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTAc                               >  6:87631/1‑149 (MQ=255)                                                                                         acgacgGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGAAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCg                             >  5:96404/1‑149 (MQ=255)                                                                                                     aGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGAAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACg                 <  6:96404/149‑1 (MQ=255)                                                                                                          aCGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTTCGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGAt              <  7:71675/147‑1 (MQ=255)                                                                                                          aCGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATg             <  5:87631/148‑1 (MQ=255)                                                                                                                 tcatattcccggcggctctccagcccgtccgggAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGcga                         >  1:38280‑M2/34‑129 (MQ=255)                                                                                                                 tcatattcccggcggctctccagcccgtccgggAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGcga                         <  2:38280‑M2/96‑1 (MQ=255)                                                                                                                   gggtCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGAc                                               <  6:88770/103‑1 (MQ=255)                                                                                                                    tattcccggcggctctccagcccgtccgggAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGgcagc  >  6:40917‑M2/31‑149 (MQ=255)                                                                                                                        CCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGAt              >  5:47095‑M1/1‑133 (MQ=255)                                                                                                                        CCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGAt              <  6:47095‑M1/133‑1 (MQ=255)                                                                                                                         ccggcggctctccagcccgtccgggAATATGATGAACCGGGCAGGCTGGTATCGga                                                                                          <  1:131414‑M2/31‑1 (MQ=255)                                                                                                                         ccggcggctctccagcccgtccgggAATATGATGAACCGGGCAGGCTGGTATCGga                                                                                          >  2:131414‑M2/26‑56 (MQ=255)                                                                                                                                       gagCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGgcag   <  6:30835/129‑1 (MQ=255)                                                                                                                                       gagCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGgcag   >  5:30835/1‑129 (MQ=255)                                                                                                                                                  |                                                                                                                       CGGAGGACAGAGTACGGTCTGAATGTGGTGTCCGGCGATATCACGGACATCACCACACCGGACGGGCGGGAGACGAAATTTTACTATAACGACGGGAACCAGCTGACGGCGGTGGTGTCCCCGGACGGGCTGGAGAGCCGCCGGGAATATGATGAACCGGGCAGGCTGGTATCGGAGACATCGCGCAGCGGGGAGACAGTACGCTACCGCTACGATGACGCGCACAGTGAGTTACCGGCGACGACAACGGATGCGACGGGCAGC  >  NC_000913/524590‑524853

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.