| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 755,308 | Δ102 bp | coding (132‑233/390 nt) | sdhC → | succinate dehydrogenase, membrane subunit, binds cytochrome b556 |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 755308 | 755409 | 102 | 47 [0] | [0] 46 | sdhC | succinate dehydrogenase, membrane subunit, binds cytochrome b556 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 755307 | 0 (0.000) | 39 (1.160) | 37/222 | 0.1 | 100% | coding (131/390 nt) | sdhC | succinate dehydrogenase, membrane subunit, binds cytochrome b556 |
| ? | NC_000913 | 755410 = | 0 (0.000) | coding (234/390 nt) | sdhC | succinate dehydrogenase, membrane subunit, binds cytochrome b556 | |||||
CCATCGCGTTTCCGGTGTGATCACCTTTGTTGCAGTGGGCATCCTGCTGTGGCTTCTGGGTACCAGCCTCTCTTCCCCTGAAGGTTTCGAGCAAGCTTCCGCGATTATGGGCAGCTTCTTCGTCAAATTTATCATGTGGGGCATCCTTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGT > NC_000913/755263‑755553 | catgtgggcgttattcatgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTa > 5:100591‑M2/148‑149 (MQ=255) ttcatgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGt > 4:57554‑M2/135‑148 (MQ=255) tcatgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGctct < 3:76285‑M2/9‑1 (MQ=255) tcatgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGctct > 4:76285‑M2/134‑142 (MQ=255) catgataagaaatgtgaaaaaacaaagacctgttaatctggaccaacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTAt < 6:79768‑M2/16‑1 (MQ=255) atgataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCa > 7:121299‑M2/132‑149 (MQ=255) gataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGc > 1:15612‑M2/130‑141 (MQ=255) gataagaaatgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGc < 2:15612‑M2/12‑1 (MQ=255) atgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTa < 3:57554‑M2/28‑1 (MQ=255) tgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAg < 2:92497‑M2/29‑1 (MQ=255) tgtgaaaaaacaaagacctgttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCACTGGCGTATCACGTCGTCGTAg < 3:60840‑M2/29‑1 (MQ=255) gttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACatgatgat > 2:135507‑M2/102‑149 (MQ=255) ttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACatgatgatg > 4:134073‑M2/101‑149 (MQ=255) ttaatctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACatgatga < 4:76191‑M2/47‑1 (MQ=255) atctggacctacagaccatccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGAt < 2:188111‑M2/52‑1 (MQ=255) gacctacagaccatccggttccccatcacggcgatagcgtcaattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTATGTATTCGCCACATGATGATGGAtttt < 8:121299‑M2/55‑1 (MQ=255) atccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGgaa > 2:110848‑M2/81‑147 (MQ=255) atccggttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGgaa < 1:110848‑M2/67‑1 (MQ=255) gttccccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACAt > 4:62441‑M2/76‑149 (MQ=255) cccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCg < 1:135507‑M2/77‑1 (MQ=255) ccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATc > 5:31869‑M2/71‑87 (MQ=255) ccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATc < 6:31869‑M2/17‑1 (MQ=255) ccatcacggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCg > 1:210221‑M2/71‑147 (MQ=255) acggcgatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCgg < 3:62441‑M2/83‑1 (MQ=255) gatagcgtccattctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAAc < 6:100591‑M2/89‑1 (MQ=255) ttctccatcgcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACAt > 7:73295‑M2/50‑123 (MQ=255) gcgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCttt < 3:134073‑M2/109‑1 (MQ=255) cgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCg > 6:99782‑M2/40‑121 (MQ=255) cgtttccggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCg < 5:99782‑M2/82‑1 (MQ=255) ggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGc < 1:139670‑M2/81‑1 (MQ=255) ggtgtgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGc > 2:139670‑M2/33‑113 (MQ=255) tgatcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTc < 2:210221‑M2/121‑1 (MQ=255) atcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTcc > 5:110589‑M2/27‑120 (MQ=255) atcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTcc < 6:110589‑M2/94‑1 (MQ=255) tcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAAtc < 4:45441‑M2/103‑1 (MQ=255) tcacctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAAtc > 3:45441‑M2/26‑128 (MQ=255) cctttgttgcagtgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACGTTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCtt > 7:112280‑M2/23‑149 (MQ=255) tgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCttt < 3:15330‑M2/128‑1 (MQ=255) tgggcatcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCttt > 4:15330‑M2/11‑138 (MQ=255) catcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCggg < 7:151421‑M2/84‑1 (MQ=255) catcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCggg > 8:151421‑M2/7‑90 (MQ=255) atcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGc > 6:26518‑M2/6‑86 (MQ=255) atcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGt > 4:93845‑M2/6‑149 (MQ=255) atcctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGt > 4:91679‑M2/6‑149 (MQ=255) cctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCa > 7:128185‑M2/4‑142 (MQ=255) cctTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCAAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCa < 8:128185‑M2/139‑1 (MQ=255) | CCATCGCGTTTCCGGTGTGATCACCTTTGTTGCAGTGGGCATCCTGCTGTGGCTTCTGGGTACCAGCCTCTCTTCCCCTGAAGGTTTCGAGCAAGCTTCCGCGATTATGGGCAGCTTCTTCGTCAAATTTATCATGTGGGGCATCCTTACCGCTCTGGCGTATCACGTCGTCGTAGGTATTCGCCACATGATGATGGATTTTGGCTATCTGGAAGAAACATTCGAAGCGGGTAAACGCTCCGCCAAAATCTCCTTTGTTATTACTGTCGTGCTTTCACTTCTCGCAGGAGT > NC_000913/755263‑755553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |