| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,862,760 | C→T | R142R (CGC→CGT) | ygbK → | FliA‑regulated DUF1537 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,862,760 | 0 | C | T | 100.0% | 140.2 / NA | 41 | R142R (CGC→CGT) | ygbK | FliA‑regulated DUF1537 family protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (21/20); total (21/20) | |||||||||||
GCCCGGTTACCGATGCCTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGCCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTCGTCAAGAGCTGGCTCGCTTAC > NC_000913/2862621‑2862899 | gCCCGGTTACCGATGCCTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCg > 7:31219/1‑149 (MQ=255) cTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCa < 1:94040/143‑1 (MQ=255) cTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCa < 1:96917/143‑1 (MQ=255) cTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCa > 2:94040/1‑143 (MQ=255) cTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCa > 2:96917/1‑143 (MQ=255) tGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCa > 3:44852/1‑138 (MQ=255) tGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCa < 4:44852/138‑1 (MQ=255) aTGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATc > 3:1450/1‑132 (MQ=255) aTGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATc < 4:1450/132‑1 (MQ=255) ggTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCAt > 6:120553/1‑114 (MQ=255) tcttctCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCa < 1:52865/111‑1 (MQ=255) tcttctCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCa > 2:52865/1‑111 (MQ=255) ttctCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATc > 4:149121/1‑149 (MQ=255) cTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGaa > 6:108358/1‑129 (MQ=255) cTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGaa < 5:108358/129‑1 (MQ=255) gCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTa < 7:14080/88‑1 (MQ=255) gCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTa > 8:14080/1‑88 (MQ=255) aaCGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTTCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAg < 6:12207/98‑1 (MQ=255) aaCGGACGTACGGTTTATAAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGAGTCATCACCCGGTAAATCCCATGACCGACAg > 5:12207/1‑98 (MQ=255) aCGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCcaca < 1:153153/127‑1 (MQ=255) aCGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCcaca > 2:153153/1‑127 (MQ=255) aCGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCCTGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGcaca > 4:16538/1‑149 (MQ=255) gTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCt > 6:123188/1‑88 (MQ=255) gTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCt < 5:123188/88‑1 (MQ=255) tCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACa < 5:38460/80‑1 (MQ=255) tCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACa > 6:38460/1‑80 (MQ=255) aGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGcgtc > 3:11277/1‑128 (MQ=255) aGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCACATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGcgtc < 4:11277/128‑1 (MQ=255) gTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTc < 4:56482/129‑1 (MQ=255) gTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTc > 3:56482/1‑129 (MQ=255) gTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAg < 3:16538/149‑1 (MQ=255) tGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGgtgt < 3:149121/148‑1 (MQ=255) aaTGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCg > 2:24348/1‑149 (MQ=255) aTGAATCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGGTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCg < 8:31219/148‑1 (MQ=255) tCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCgg > 5:153357/1‑113 (MQ=255) tCAACTGCTGGCCGAATCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCgg < 6:153357/113‑1 (MQ=255) aaTCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTCGTc < 2:8646/135‑1 (MQ=255) aaTCCGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTCGTc > 1:8646/1‑135 (MQ=255) cGGGATGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTCGTCAAGAGCTGGCTCGCTTAc < 1:24348/149‑1 (MQ=255) aTGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTc < 1:144108/124‑1 (MQ=255) aTGCGTCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTc > 2:144108/1‑124 (MQ=255) | GCCCGGTTACCGATGCCTTAATGGATGCTCTCGACACGCCGTTTACGGTCTTCTCTCCGGCCCTGCCGGTCAACGGACGTACGGTTTATCAGGGGTATTTGTTCGTAATGAATCAACTGCTGGCCGAATCCGGGATGCGCCATCACCCGGTAAATCCCATGACCGACAGCTATCTTCCCCGTCTGGTTGAAGCGCAATCCACAGGGCGCTGCGGCGTCGTTTCGGCACATGTTTTCGAACAAGGTGTGGATGCCGTTCGTCAAGAGCTGGCTCGCTTAC > NC_000913/2862621‑2862899 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |