| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,362,956 | C→A | 13.2% | S50S (TCC→TCA) | yhcD → | putative outer membrane fimbrial subunit usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,362,956 | 0 | C | A | 13.2% | 289.0 / 4.4 | 105 | S50S (TCC→TCA) | yhcD | putative outer membrane fimbrial subunit usher protein |
| Reads supporting (aligned to +/- strand): ref base C (39/49); new base A (14/3); total (53/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TTAAAAAAAACGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCC > NC_000913/3362810‑3363102 | ttAAAAAAAACGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTccc > 7:234765/1‑148 (MQ=255) tAAAAAAAACGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCAGCTCTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATACTAATATATCGCATTATTTTTCCCg > 7:318567/1‑148 (MQ=255) aaaaaaaCGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGtt < 5:40346/148‑1 (MQ=255) aaaaCGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAg < 8:200526/148‑1 (MQ=255) aaaCGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGc > 5:97177/1‑148 (MQ=255) cTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGttttt < 6:97177/148‑1 (MQ=255) cTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGtttt < 1:194239/147‑1 (MQ=255) acacCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCATAATATATCGCATTATTTTTCAAGTTCAGCCCGTTTTTTGCCAgg > 4:235799/1‑148 (MQ=255) aTTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGaa > 3:295174/1‑147 (MQ=255) aTTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAat < 6:192247/148‑1 (MQ=255) ttGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCAAAATATTACCCATTAAATTTAAAAAAAAACCCGTTTTTTGCCAGGTGAata > 2:214632/1‑148 (MQ=255) gTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTc < 4:1473/148‑1 (MQ=255) tttGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTc < 4:60644/146‑1 (MQ=255) tttGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCAc > 3:165682/1‑148 (MQ=255) tttGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCACGTTTTTTGCCAGGTGAATATTc > 3:60644/1‑146 (MQ=255) tttGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCAAATATATCGCATTAATTTTCACGTTAAGCCCGTTTTTTGCCAGGTGAATATTCAc > 6:94001/1‑148 (MQ=255) tttGCCTTTTCTCCCCCAGACAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCAGTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCAc > 5:316403/1‑148 (MQ=255) ttGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCAAAATATAACCCATATAATTAAAAATAAAACCCGTTTTTTGCCAGGTGATTATTCACt > 8:188832/1‑148 (MQ=255) ggCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTCCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTA‑TTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTg < 6:81143/146‑1 (MQ=255) ccTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGa > 3:214841/1‑147 (MQ=255) ccTTTTATCCCCCAGCCAATGCAGATTGTATAGAGATAGCCGCTGTTGATTTTGATCGGGAAACAATAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGAt < 4:225642/148‑1 (MQ=255) ttttCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCAAAATATAACCCATAAAATTAAAAAATAAACACGTTTTTTGCCAGGTGAATATTCACTGATAg > 2:74352/1‑148 (MQ=255) tttCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCACGTTTTTTGCCAGGTGAATATTCAATGATAg > 5:85689/1‑147 (MQ=255) tttCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCATAATATATCGCATTATTTTTAACTTTAAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAg > 2:289530/1‑147 (MQ=255) ttCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAg < 8:237256/146‑1 (MQ=255) ttCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGt < 3:235799/147‑1 (MQ=255) tctcCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTa < 8:202609/147‑1 (MQ=255) tctcCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCAAAATATAACCCATTAATTTTAAATATCAGCACGTTTTTTGCCAGGTGAATATTCACTGATAGTa > 8:31948/1‑147 (MQ=255) ccccAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATc < 5:363110/145‑1 (MQ=255) cccaAGCCAATGCAGATGGTATAGAGATTGGAGCGTTTGATTTTGATCGGGAAACTTTAATATGACTAGGTGTAGATCCTAATATATCGCATTTTTTTTCCCGTTCAGGCCTTTTTTTGCCAGGTGAATATTCACTGATAGTATc < 6:85689/145‑1 (MQ=255) cccAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGtt > 7:25532/1‑113 (MQ=255) cccAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGtt < 8:25532/113‑1 (MQ=255) ccAGCCAATGCAGATGGAATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAACTCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTaa < 7:210818/148‑1 (MQ=255) cAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTTATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCATAATATAACGCATTATATTTAAAAAAAAAAACGTTATTTGCCAGGTGAATATTAACTGATAGTATCAGTaaa > 2:362874/1‑148 (MQ=255) gCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATg < 1:214632/148‑1 (MQ=255) aaTGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTg > 1:237317/1‑111 (MQ=255) aaTGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTg < 2:237317/111‑1 (MQ=255) tGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGa > 5:261435/1‑147 (MQ=255) gCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAgg < 2:222387/113‑1 (MQ=255) gCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAgg > 1:222387/1‑113 (MQ=255) gCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTa < 2:15030/132‑1 (MQ=255) gCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTa > 1:15030/1‑132 (MQ=255) aTGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGaaaaaaa < 5:113232/148‑1 (MQ=255) tGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGaaaaaaaa < 7:367724/148‑1 (MQ=255) gTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAg < 7:31948/147‑1 (MQ=255) tataGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGaaaaaaa > 1:107516/1‑144 (MQ=255) tataGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGaaaaaaa < 2:107516/144‑1 (MQ=255) agagATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATAGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCaa > 5:21583/1‑147 (MQ=255) gtgaTTGCCGGTGTTTTTTTTGATCGGGATACATTAAAATCACTAGGTGTAGATCCTAATATTTCGCATTATTTTTCACGTTCAGCCCGTTTTTTGCCAGGTGTATATTCACTGATATTATCAGTAAATGGCGAAAAAAAAGGCAAc < 3:96844/145‑1 (MQ=255) gagaTTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCACGTTTTTTGCAAGGTGAATATTCACTGATAGTATCAGTAAATGTCGAAAAAAAATGCAACa > 3:241810/1‑148 (MQ=255) agaTTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTa < 3:20278/119‑1 (MQ=255) gaTTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCAATTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTAt > 4:20278/1‑119 (MQ=255) ttGCAGCTGTTGATTTTCATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTaa < 1:237950/123‑1 (MQ=255) tGCCGCTGTTGATTTTCATCGGGAAACATTAAAATCACTAGGTGTAGATCAAAATATTACCCATAAAATTAAAAAAAAAAACCGTTTTTAGCCAGGTGAATATTCACTGATAGTATCAGTaaa > 2:237950/1‑123 (MQ=255) ggcggtGTTGATTTTGATCGGGAAACATTAAAATCACTTGGTGTAGATCATAATATATCGCATTTTTTTTGCCGTTGAGGCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACTTTGCt < 8:318567/142‑1 (MQ=255) cTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCTTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTaa < 3:92381/117‑1 (MQ=255) tGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCAAAATATATCGCATAAATTTAACAAAAAAACCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTaaa > 4:92381/1‑117 (MQ=255) ttGATTTTGATCGGGAAACTTTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTg < 3:131515/101‑1 (MQ=255) tGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGAt > 5:57858/1‑102 (MQ=255) tGATATTGATCGCGAAACATTAAAATCACTAGGTGTAGATCAAAATATAACCCATAAAATTTAAAAAAAAAACCGTTTTTTGCCAGGTGAATATTCACTGa > 4:131515/1‑101 (MQ=255) aTTTTGATAGGGAAACATTAAAATCACTAGGTGTAGATACTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTTAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTtga < 1:362874/148‑1 (MQ=255) ttttGATCGGGAAACATTAAAATCACTTGGTGTAGATCCTAATATAACGCATTATTTTTCCCGTTCATCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTtga < 1:289530/147‑1 (MQ=255) ttttGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTtga < 4:214841/147‑1 (MQ=255) gATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGaa < 2:33106/147‑1 (MQ=255) attgggAAAAATTAAAATAACTAGGTGTAGATACTAATATATCGAATTATTTTTCACGTTCAGACGGTTTTTTGTCAGGTTAATATTTAATGATAGTATCAGTAAATGGCGAAAAAAAAGGCTATATTGGTATTAGATTTGATGaaa < 4:295174/144‑1 (MQ=255) aTCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTg < 7:31966/92‑1 (MQ=255) aTCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGaaa < 8:195075/147‑1 (MQ=255) tCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAAt < 4:165682/148‑1 (MQ=255) tCGGGAAACATTAAAATCACTAGGTGTAGATCATAATATATCCCATTATTTTTAAAATTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGa > 8:31966/1‑92 (MQ=255) cGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACAt < 6:391104/125‑1 (MQ=255) aCTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGa < 6:261435/147‑1 (MQ=255) ggTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCa < 5:94001/146‑1 (MQ=255) tgtAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCa > 1:387416/1‑148 (MQ=255) gtAGATCCAAATATAACGCATAATATTTCCCTTAAAGACCGTTTTTTGGCAGGTGAATATTCACTGATAGTATCAGTAATTGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACAATTGACTTCTGCAGGCAt > 8:389538/1‑148 (MQ=255) tAGATCCTAATTTATCGAATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAtt < 8:234765/148‑1 (MQ=255) tAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATAATCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAtt > 6:231151/1‑148 (MQ=255) aGATCATAATATATCGCATTATTTTTCACTTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAtt < 3:252030/147‑1 (MQ=255) gATCATAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCAttt < 1:374029/147‑1 (MQ=255) tCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCTGTAAATTGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCtt > 1:276515/1‑147 (MQ=255) cTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTTCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGca < 1:107393/148‑1 (MQ=255) cTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGca < 6:391978/148‑1 (MQ=255) tAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCG‑AAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGcaa > 4:8883/1‑147 (MQ=255) atatatCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGcaac > 2:294289/1‑147 (MQ=255) tagCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGcc < 5:116882/145‑1 (MQ=255) tCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCg > 2:374944/1‑148 (MQ=255) cGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCgg > 6:373157/1‑148 (MQ=255) cATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTCAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTAGATGAAAATGGCTACATTTGTATTGATAAGGAATATCTGCAACAAGCCGGtt > 5:219634/1‑148 (MQ=255) attattTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGtt > 7:38224/1‑147 (MQ=255) ttattTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGttt > 2:66335/1‑147 (MQ=255) ttattTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGAAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATAAGGAATTTCTGCAACAAGCCGGttt > 3:67003/1‑147 (MQ=255) tattTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGaaa > 8:395848/1‑100 (MQ=255) tattTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGaaa < 7:395848/100‑1 (MQ=255) tattTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTa > 5:69739/1‑147 (MQ=255) tattTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTa > 2:137561/1‑147 (MQ=255) attTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTGTGCAAAAAGGCGGTTTaa > 3:82121/1‑147 (MQ=255) ttttCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTaaaaa > 4:274502/1‑148 (MQ=255) ttCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACAtt < 4:134541/106‑1 (MQ=255) ttCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACAtt > 3:134541/1‑106 (MQ=255) cccGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGTAACAAGCCGGTTTAAAAATTc < 2:387416/147‑1 (MQ=255) cccGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTcc > 5:195595/1‑148 (MQ=255) | TTAAAAAAAACGTTACTGGCCTACACCATTGGTTTTGCCTTTTCTCCCCCAGCCAATGCAGATGGTATAGAGATTGCCGCTGTTGATTTTGATCGGGAAACATTAAAATCACTAGGTGTAGATCCTAATATATCGCATTATTTTTCCCGTTCAGCCCGTTTTTTGCCAGGTGAATATTCACTGATAGTATCAGTAAATGGCGAAAAAAAAGGCAACATTGCTACGCGCTTTGATGAAAATGGCGACATTTGTCTTGATCAGGCATTTCTGCAACAAGCCGGTTTAAAAATTCC > NC_000913/3362810‑3363102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |