New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 835510 = | 30 (0.770) | 6 (0.160) | 6/242 | 3.4 | 15.4% | coding (263/963 nt) | ybiB | putative family 3 glycosyltransferase |
? | NC_000913 | 835549 = | 38 (1.040) | coding (302/963 nt) | ybiB | putative family 3 glycosyltransferase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GGCGGCGTATTGATTGCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGC > NC_000913/835374‑835656 | ggcggcGTATTGATTGCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGcgcgcg > 1:28345/1‑149 (MQ=255) attgCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCaa > 7:89357/1‑149 (MQ=255) tCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCCACCTGACGCCgttg > 7:73560/1‑149 (MQ=255) aaaGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAAc > 8:36666/1‑127 (MQ=255) aaaGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAAc < 7:36666/127‑1 (MQ=255) aaaGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGAc > 8:73088/1‑140 (MQ=255) aaaGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGAc < 7:73088/140‑1 (MQ=255) aaGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGttgttg > 5:90567/1‑149 (MQ=255) agaAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGa < 1:143817/149‑1 (MQ=255) tGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTc < 6:90567/149‑1 (MQ=255) gCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCg > 1:31575/1‑149 (MQ=255) cTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCgg < 2:28345/149‑1 (MQ=255) ggCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGttt > 7:42499/1‑149 (MQ=255) cTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGtt < 8:73560/146‑1 (MQ=255) aCGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCtgt < 8:89357/148‑1 (MQ=255) aaaaTCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACggg < 8:42499/149‑1 (MQ=255) aaaaTCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACgg > 6:162621/1‑148 (MQ=255) aaaaTCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCCATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACgg < 5:162621/148‑1 (MQ=255) ccATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGaa < 1:190536/149‑1 (MQ=255) aTCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCg > 7:101766/1‑145 (MQ=255) cctgCTGGCGGCGTCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCgg < 2:142073/111‑1 (MQ=255) cctgCTGGCGGCGTCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCgg > 1:142073/4‑114 (MQ=255) ccAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGct < 2:31575/149‑1 (MQ=255) agGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGctgact > 3:147904/1‑148 (MQ=255) cAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGaaa < 8:113159/149‑1 (MQ=255) tCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGAt < 4:147904/148‑1 (MQ=255) aTCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATggg < 2:182555/149‑1 (MQ=255) gTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGAt < 4:165574/139‑1 (MQ=255) gTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGAt > 3:165574/1‑139 (MQ=255) ttACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGc > 6:146869/1‑149 (MQ=255) | GGCGGCGTATTGATTGCGCTGCGTATCAAAGGAGAAGGGGAAGCAGAGATGCTCGGCTTTTACGAAGCCATGCAAAATCACACCATCAAGCTGACGCCGCCAGCAGGCAAGCCGATGCCGATTGTCATCCCCAGTTACAACGGCGCGCGTAAACAGGCCAACCTGACGCCGTTGTTGGCGATTCTCCTGCACAAACTCGGTTTTCCTGTGGTGGTTCACGGGGTTAGCGAAGATCCAACCCGCGTGCTGACTGAAACCATTTTTGAATTGATGGGTATTACGC > NC_000913/835374‑835656 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |