Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,310,417 IS2 (–) +5 bp coding (560‑564/1533 nt) alsA ← D‑allose ABC transporter ATPase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3186096 =NA (NA)104 (1.070) 84/270 0.1 99.0% noncoding (1/1331 nt) IS2 repeat region
?NC_000913 4310417 = 1 (0.010)coding (564/1533 nt) alsA D‑allose ABC transporter ATPase
* ? NC_000913 = 43104211 (0.010)79 (0.820) 67/268 0.4 98.7% coding (560/1533 nt) alsA D‑allose ABC transporter ATPase
?NC_000913 = 4499511 NA (NA)noncoding (1331/1331 nt) IS2 repeat region

Only 100 of 185 total aligned reads displayed.

TCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGA  >  NC_000913/4310274‑4310567
                                                                                                                                                   |                                                                                                                                                  
tCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGa                                                                                                                                                    <  2:220797/148‑1 (MQ=255)
tCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAt                                                                                                                                                   >  3:146158‑M1/1‑148 (MQ=255)
 ttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGAt                                                                                                                                                   <  3:341744‑M2/6‑1 (MQ=255)
  gTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtg                                                                                                                                                  <  1:34701‑M1/148‑3 (MQ=255)
  gTCATTTGACACATCGCTTACTATGCCGCTGCAAAAGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtg                                                                                                                                                  <  2:313170‑M1/148‑3 (MQ=255)
      tttGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggattt                                                                                                                                             <  4:146158‑M1/149‑8 (MQ=255)
      gtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgacttgtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcaggggggcagtctaCATGATCAGaaa                                                                                                                                             >  1:203451‑M2/138‑149 (MQ=255)
       tgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGaaa                                                                                                                                             <  1:132859‑M2/12‑1 (MQ=255)
        tGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgc                                                                                                                                           >  2:348496‑M1/1‑140 (MQ=255)
        gtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGaaa                                                                                                                                             >  7:15693‑M2/136‑147 (MQ=255)
         tggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaatctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAg                                                                                                                                          <  1:76868‑M2/15‑1 (MQ=255)
         gACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgc                                                                                                                                           <  1:348496‑M1/148‑10 (MQ=255)
         gACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgc                                                                                                                                           <  6:299317‑M1/148‑10 (MQ=255)
           gtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGa                                                                                                                                         >  2:327314‑M2/133‑148 (MQ=255)
              aTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgg                                                                                                                                                 <  1:422931‑M1/137‑4 (MQ=255)
              aTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgg                                                                                                                                                 <  1:429192‑M1/137‑4 (MQ=255)
              aTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgg                                                                                                                                                 >  2:429192‑M1/1‑134 (MQ=255)
              aTCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgg                                                                                                                                                 >  2:422931‑M1/1‑134 (MQ=255)
               gccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTc                                                                                                                                    <  4:168672‑M2/21‑1 (MQ=255)
                      cTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttcca                                                                                                                              <  5:221076‑M1/148‑23 (MQ=255)
                         tttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTa                                                                                                                          <  2:153114‑M2/31‑1 (MQ=255)
                             tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTgg                                                                                                                      >  3:373274‑M2/115‑149 (MQ=255)
                               tGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgt                                                                                                                     >  6:33559‑M1/1‑117 (MQ=255)
                               cggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTg                                                                                                                       <  8:15693‑M2/34‑1 (MQ=255)
                                ggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggtcgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtga                                                                                                                   <  5:178182‑M2/38‑1 (MQ=255)
                                  ccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgagt                                                                                                                 <  4:373274‑M2/40‑1 (MQ=255)
                                    aCGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcac                                                                                                               <  7:39915‑M1/149‑38 (MQ=255)
                                     taagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgag                                                                                                                  >  4:363781‑M2/107‑145 (MQ=255)
                                     taagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgtgag                                                                                                                  <  3:363781‑M2/39‑1 (MQ=255)
                                           tgcCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacc                                                                                                         >  6:16217‑M1/1‑105 (MQ=255)
                                             ccGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccat                                                                                                      <  5:33559‑M1/149‑47 (MQ=255)
                                             ccGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaaccca                                                                                                       <  6:316432‑M1/148‑46 (MQ=255)
                                                  tttCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTCCCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattac                                                                                                   >  3:198408‑M1/1‑98 (MQ=255)
                                                   tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGa                                                                                                                                               <  7:439334‑M2/10‑1 (MQ=255)
                                                   tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGa                                                                                                                                               >  8:439334‑M2/93‑102 (MQ=255)
                                                   tctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGgt                                                                                                                     <  2:367490‑M2/36‑1 (MQ=255)
                                                    tcatcaCCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtgga                                                                                                                                                <  7:243276‑M1/100‑5 (MQ=255)
                                                          tccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgat                                                                                          >  2:103065‑M2/86‑148 (MQ=255)
                                                            caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat                                                                                       <  8:316853‑M2/66‑1 (MQ=255)
                                                            caatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgat                                                                                       >  5:395634‑M2/84‑149 (MQ=255)
                                                             aatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGGGTGAGGAGGTGGGTTCATCCatgatgatg                                                                                      >  7:52366‑M2/83‑149 (MQ=255)
                                                             aatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCatgatgatg                                                                                      <  1:103065‑M2/67‑1 (MQ=255)
                                                               taGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgca                                                                                    <  7:237466‑M1/149‑65 (MQ=255)
                                                               taGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgc                                                                                     <  3:259583‑M1/148‑64 (MQ=255)
                                                               taGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatc                                                                                                                 >  4:48166‑M1/1‑85 (MQ=255)
                                                                  ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt                                                                                 <  2:400926‑M2/72‑1 (MQ=255)
                                                                        taaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATc                                                                                                                                                  >  6:82642‑M2/72‑78 (MQ=255)
                                                                         aaaTACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgccccaatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccg                                                                          <  3:69292‑M1/149‑75 (MQ=255)
                                                                           aTACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtg                                                                        <  3:33908‑M1/149‑77 (MQ=255)
                                                                            aactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAg                                                                        >  7:80493‑M2/68‑148 (MQ=255)
                                                                             actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGaaa                                                                                                                                             >  1:152774‑M2/67‑78 (MQ=255)
                                                                             actagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCa                                                                      <  3:209514‑M2/83‑1 (MQ=255)
                                                                                  gAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagc                                                                  >  3:119282‑M1/1‑66 (MQ=255)
                                                                                    ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCa                                                                                                                                  <  2:258966‑M2/23‑1 (MQ=255)
                                                                                    ttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGt                                                               >  3:280263‑M2/60‑149 (MQ=255)
                                                                                       agactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGtttt                                                            >  1:282120‑M2/57‑149 (MQ=255)
                                                                                       agactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGttt                                                             <  8:237812‑M2/92‑1 (MQ=255)
                                                                                          gCCAACTTATGCGAGATATAGACGATGGCCGTACCCTATTTACGCAACTGATTCATGAtggatttgcacatatatttacagacatctgttaccacttaacccattacaagcccgctgcctcagatattcacgtggcgagcgataacc                                                           >  8:253431‑M1/1‑58 (MQ=255)
                                                                                          ctatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGc                                                         <  7:28736‑M2/96‑1 (MQ=255)
                                                                                           tatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTgg                                                                                                       <  8:412101‑M2/50‑1 (MQ=255)
                                                                                           tatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCa                                                                      >  4:108280‑M2/53‑135 (MQ=255)
                                                                                           tatcacttatttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCa                                                                      <  3:108280‑M2/83‑1 (MQ=255)
                                                                                             aaCTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcg                                                      <  4:119282‑M1/149‑95 (MQ=255)
                                                                                             aaCTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAAATGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcg                                                      <  8:399283‑M1/149‑95 (MQ=255)
                                                                                                   atttaagtgatattggttgtctggagattcagggggccagtctaCATGATCAGAACCAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGATCATCAGCGTTTTGGCAATTTCTa                                                 <  4:309563‑M2/104‑1 (MQ=255)
                                                                                                         gtgatattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTg                                          >  6:124854‑M2/39‑149 (MQ=255)
                                                                                                            atattggttgtctggagattcagggggccagtataCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCtt                                       <  4:208008‑M2/114‑1 (MQ=255)
                                                                                                             tattggttgtctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTtg                                      <  6:395634‑M2/115‑1 (MQ=255)
                                                                                                                      tctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgata                             <  1:384968‑M2/124‑1 (MQ=255)
                                                                                                                      tctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTgat                              <  4:280263‑M2/123‑1 (MQ=255)
                                                                                                                      ccGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttata                             <  5:16217‑M1/149‑120 (MQ=255)
                                                                                                                       ctggagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTga                               >  1:178598‑M2/25‑146 (MQ=255)
                                                                                                                       cGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataa                            <  4:222249‑M1/149‑121 (MQ=255)
                                                                                                                       cGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                            <  8:361900‑M1/117‑89 (MQ=255)
                                                                                                                       cGTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataac                                                            >  7:361900‑M1/1‑29 (MQ=255)
                                                                                                                        gTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgc                                              <  6:25841‑M1/130‑103 (MQ=255)
                                                                                                                        gTACCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgc                                              >  5:25841‑M1/1‑28 (MQ=255)
                                                                                                                          gagattcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACttt                                                                                 >  6:239542‑M2/22‑93 (MQ=255)
                                                                                                                          aCCCTCTTTACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgc                         >  7:367218‑M1/1‑26 (MQ=255)
                                                                                                                           cccTATTTACGCAACTGATTCTTGAtggatttgcccgtatatttccagacatctgttacaacttaacccattacaagcccgctgccgcagatattcccgtgtcgagcgataacccagcgcactatgcggatgccattcgttataatgc                         <  7:253431‑M1/148‑124 (MQ=255)
                                                                                                                               tcagggggtcagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTc                    >  6:211985‑M2/17‑149 (MQ=255)
                                                                                                                               tcagggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTc                    >  4:123019‑M2/17‑149 (MQ=255)
                                                                                                                                 ttACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcc                                       <  6:271650‑M1/128‑110 (MQ=255)
                                                                                                                                 ttACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgcc                                       >  5:271650‑M1/1‑19 (MQ=255)
                                                                                                                                  tACGCAACTGATTCATGAtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaa                    <  2:196861‑M1/146‑129 (MQ=255)
                                                                                                                                  gggggccagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTc                    >  8:390057‑M2/14‑146 (MQ=255)
                                                                                                                                        cagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtc           >  8:75193‑M2/8‑149 (MQ=255)
                                                                                                                                        cagtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtc           <  3:41546‑M2/142‑1 (MQ=255)
                                                                                                                                         agtctaCATGATCAGAAACAGATAGTCCCCCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtct          >  5:315024‑M2/7‑149 (MQ=255)
                                                                                                                                          gtctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTtct          >  7:201736‑M2/6‑148 (MQ=255)
                                                                                                                                           tctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGc                                         <  1:79744‑M2/112‑1 (MQ=255)
                                                                                                                                           tctaCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCa        <  8:201736‑M2/145‑1 (MQ=255)
                                                                                                                                              aCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACtt             >  2:88301‑M2/2‑141 (MQ=255)
                                                                                                                                              aCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACtt             <  1:88301‑M2/140‑1 (MQ=255)
                                                                                                                                                 tgatggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt  >  3:296978‑M1/1‑3 (MQ=255)
                                                                                                                                                 tgatggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctt  <  2:83506‑M1/149‑147 (MQ=255)
                                                                                                                                                  gatggatttgcccctatattttcatacatatgttatcacttaacccattacaatcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgt                                 <  4:73198‑M1/117‑116 (MQ=255)
                                                                                                                                                  gatggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgt                                 >  5:254987‑M1/1‑2 (MQ=255)
                                                                                                                                                  gATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACttt            >  4:278681/1‑138 (MQ=255)
                                                                                                                                                  gATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACttt            <  3:278681/138‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
TCGTCATTTGACACATCGCTTACTATGCCGCTGCAAACGCTGCTGCCGTCTTTCATCACCGTATAGCGGTCGCAAATACGGCGAATTTCCGCCAACTTATGCGAGATATAGACGATGGCCGTACCCTCTTTACGCAACTGATTCATGATCAGAAACAGATAGTCCACCTCTTTATTGGTGAGTGAGGAGGTGGGTTCATCCATGATGATGACTTTGGCATCGAGCATCAGCGTTTTGGCAATTTCTAGCATCTGCTTGTGGCTGATAGATAAATTCGCCACTTTCTCATCTAGA  >  NC_000913/4310274‑4310567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.